RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 CARTPTQ16568 116 aa18.43■□□□□ 0.54
CD47-202ENST00000361309 GPAT3Q53EU6 434 aa18.43■□□□□ 0.54
CD47-202ENST00000361309 KLHL24Q6TFL4 600 aa18.43■□□□□ 0.54
CD47-202ENST00000361309 OR8J2Q8NGG1 315 aa18.43■□□□□ 0.54
CD47-202ENST00000361309 KIF18AQ8NI77 898 aa18.43■□□□□ 0.54
CD47-202ENST00000361309 TCP10LQ8TDR4 215 aa18.43■□□□□ 0.54
CD47-202ENST00000361309 FOXN4Q96NZ1 517 aa18.43■□□□□ 0.54
CD47-202ENST00000361309 ASIC5Q9NY37 505 aa18.43■□□□□ 0.54
CD47-202ENST00000361309 OSGIN1Q9UJX0 560 aa18.43■□□□□ 0.54
CD47-202ENST00000361309 IGHV4-61A0A0C4DH41 118 aa18.42■□□□□ 0.54
CD47-202ENST00000361309 PRAMEF27A3QJZ7 478 aa18.42■□□□□ 0.54
CD47-202ENST00000361309 KLF11O14901 512 aa18.42■□□□□ 0.54
CD47-202ENST00000361309 ZNF208O43345 1280 aa18.42■□□□□ 0.54
CD47-202ENST00000361309 SCN2BO60939 215 aa18.42■□□□□ 0.54
CD47-202ENST00000361309 POLR2HP52434 150 aaKnown RBP18.42■□□□□ 0.54
CD47-202ENST00000361309 HIKESHIQ53FT3 197 aa18.42■□□□□ 0.54
CD47-202ENST00000361309 C1QTNF12Q5T7M4 302 aa18.42■□□□□ 0.54
CD47-202ENST00000361309 SAXO2Q658L1 398 aa18.42■□□□□ 0.54
CD47-202ENST00000361309 EIF1ADQ8N9N8 165 aaKnown RBP18.42■□□□□ 0.54
CD47-202ENST00000361309 PMM1Q92871 262 aa18.42■□□□□ 0.54
CD47-202ENST00000361309 ZC3H12DA2A288 527 aaKnown RBP18.41■□□□□ 0.54
CD47-202ENST00000361309 HNF1AP20823 631 aa18.41■□□□□ 0.54
CD47-202ENST00000361309 TACR3P29371 465 aa18.41■□□□□ 0.54
CD47-202ENST00000361309 KHKP50053 298 aa18.41■□□□□ 0.54
CD47-202ENST00000361309 SNRPD2P62316 118 aaKnown RBP18.41■□□□□ 0.54
CD47-202ENST00000361309 HPCAP84074 193 aa18.41■□□□□ 0.54
CD47-202ENST00000361309 OTUD3Q5T2D3 398 aaPredicted RBP18.41■□□□□ 0.54
CD47-202ENST00000361309 PAQR6Q6TCH4 344 aa18.41■□□□□ 0.54
CD47-202ENST00000361309 ANKS4BQ8N8V4 417 aa18.41■□□□□ 0.54
CD47-202ENST00000361309 TMEM45BQ96B21 275 aa18.41■□□□□ 0.54
CD47-202ENST00000361309 PPP1R36Q96LQ0 422 aa18.41■□□□□ 0.54
CD47-202ENST00000361309 VRK1Q99986 396 aaPredicted RBP18.41■□□□□ 0.54
CD47-202ENST00000361309 DPY30Q9C005 99 aa18.41■□□□□ 0.54
CD47-202ENST00000361309 IGHV1-18A0A0C4DH31 117 aa18.4■□□□□ 0.54
CD47-202ENST00000361309 PRSS51A0A1B0GVH4 220 aa18.4■□□□□ 0.54
CD47-202ENST00000361309 LOC390937A0A1W2PQ73 354 aa18.4■□□□□ 0.54
CD47-202ENST00000361309 SMU1Q2TAY7 513 aa18.4■□□□□ 0.54
CD47-202ENST00000361309 IQCCQ4KMZ1 466 aa18.4■□□□□ 0.54
CD47-202ENST00000361309 AAED1Q7RTV5 226 aa18.4■□□□□ 0.54
CD47-202ENST00000361309 SLC46A3Q7Z3Q1 461 aa18.4■□□□□ 0.54
CD47-202ENST00000361309 TMEM99Q8N816 258 aa18.4■□□□□ 0.54
CD47-202ENST00000361309 ZIC4Q8N9L1 334 aa18.4■□□□□ 0.54
CD47-202ENST00000361309 NEURL3Q96EH8 262 aa18.4■□□□□ 0.54
CD47-202ENST00000361309 ZNF385AQ96PM9 386 aaKnown RBP18.4■□□□□ 0.54
CD47-202ENST00000361309 AKR7A3O95154 331 aa18.39■□□□□ 0.53
CD47-202ENST00000361309 TGFAP01135 160 aa18.39■□□□□ 0.53
CD47-202ENST00000361309 C1QCP02747 245 aa18.39■□□□□ 0.53
CD47-202ENST00000361309 BPGMP07738 259 aa18.39■□□□□ 0.53
CD47-202ENST00000361309 CHI3L1P36222 383 aaPredicted RBP18.39■□□□□ 0.53
CD47-202ENST00000361309 SERPINF1P36955 418 aa18.39■□□□□ 0.53
CD47-202ENST00000361309 SLC1A3P43003 542 aa18.39■□□□□ 0.53
CD47-202ENST00000361309 PDCD2Q16342 344 aaPredicted RBP18.39■□□□□ 0.53
CD47-202ENST00000361309 ANXA8L1Q5VT79 327 aa18.39■□□□□ 0.53
CD47-202ENST00000361309 SPATA19Q7Z5L4 167 aa18.39■□□□□ 0.53
CD47-202ENST00000361309 POMGNT2Q8NAT1 580 aa18.39■□□□□ 0.53
CD47-202ENST00000361309 OR9K2Q8NGE7 335 aa18.39■□□□□ 0.53
CD47-202ENST00000361309 AURKBQ96GD4 344 aaPredicted RBP18.39■□□□□ 0.53
CD47-202ENST00000361309 SLC38A2Q96QD8 506 aa18.39■□□□□ 0.53
CD47-202ENST00000361309 KCNS3Q9BQ31 491 aa18.39■□□□□ 0.53
CD47-202ENST00000361309 SLC35A5Q9BS91 424 aa18.39■□□□□ 0.53
CD47-202ENST00000361309 AKTIPQ9H8T0 292 aa18.39■□□□□ 0.53
CD47-202ENST00000361309 MYOZ1Q9NP98 299 aaPredicted RBP18.39■□□□□ 0.53
CD47-202ENST00000361309 CA10Q9NS85 328 aa18.39■□□□□ 0.53
CD47-202ENST00000361309 MARCOQ9UEW3 520 aaPredicted RBP18.39■□□□□ 0.53
CD47-202ENST00000361309 HMGN4O00479 90 aa18.38■□□□□ 0.53
CD47-202ENST00000361309 NUDT17P0C025 328 aa18.38■□□□□ 0.53
CD47-202ENST00000361309 ZNF23P17027 643 aa18.38■□□□□ 0.53
CD47-202ENST00000361309 CEACAM7Q14002 265 aa18.38■□□□□ 0.53
CD47-202ENST00000361309 SQLEQ14534 574 aa18.38■□□□□ 0.53
CD47-202ENST00000361309 CASP8Q14790 479 aa18.38■□□□□ 0.53
CD47-202ENST00000361309 SYPL1Q16563 259 aa18.38■□□□□ 0.53
CD47-202ENST00000361309 CMIPQ8IY22 773 aa18.38■□□□□ 0.53
CD47-202ENST00000361309 ANKFN1Q8N957 763 aa18.38■□□□□ 0.53
CD47-202ENST00000361309 VPS37AQ8NEZ2 397 aa18.38■□□□□ 0.53
CD47-202ENST00000361309 BOD1Q96IK1 185 aa18.38■□□□□ 0.53
CD47-202ENST00000361309 ZIM3Q96PE6 472 aa18.38■□□□□ 0.53
CD47-202ENST00000361309 SOX7Q9BT81 388 aa18.38■□□□□ 0.53
CD47-202ENST00000361309 BPESC1Q9GZL8 116 aa18.38■□□□□ 0.53
CD47-202ENST00000361309 SLC38A1Q9H2H9 487 aa18.38■□□□□ 0.53
CD47-202ENST00000361309 OBP2BQ9NPH6 170 aa18.38■□□□□ 0.53
CD47-202ENST00000361309 TMEM45AQ9NWC5 275 aa18.38■□□□□ 0.53
CD47-202ENST00000361309 AGAP5A6NIR3 686 aa18.37■□□□□ 0.53
CD47-202ENST00000361309 LIPT2A6NK58 231 aa18.37■□□□□ 0.53
CD47-202ENST00000361309 KRT33AO76009 404 aa18.37■□□□□ 0.53
CD47-202ENST00000361309 GPIP06744 558 aa18.37■□□□□ 0.53
CD47-202ENST00000361309 CHRM4P08173 479 aa18.37■□□□□ 0.53
CD47-202ENST00000361309 MAP2K6P52564 334 aa18.37■□□□□ 0.53
CD47-202ENST00000361309 LGALS3BPQ08380 585 aa18.37■□□□□ 0.53
CD47-202ENST00000361309 OR7A5Q15622 319 aa18.37■□□□□ 0.53
CD47-202ENST00000361309 CR1LQ2VPA4 569 aa18.37■□□□□ 0.53
CD47-202ENST00000361309 TBRG1Q3YBR2 411 aa18.37■□□□□ 0.53
CD47-202ENST00000361309 ABHD12BQ7Z5M8 362 aaPredicted RBP18.37■□□□□ 0.53
CD47-202ENST00000361309 GPAT4Q86UL3 456 aa18.37■□□□□ 0.53
CD47-202ENST00000361309 RIBC1Q8N443 379 aaPredicted RBP18.37■□□□□ 0.53
CD47-202ENST00000361309 OR1K1Q8NGR3 316 aa18.37■□□□□ 0.53
CD47-202ENST00000361309 TRNT1Q96Q11 434 aaKnown RBP18.37■□□□□ 0.53
CD47-202ENST00000361309 KATNB1Q9BVA0 655 aa18.37■□□□□ 0.53
CD47-202ENST00000361309 SF3B5Q9BWJ5 86 aaKnown RBP18.37■□□□□ 0.53
CD47-202ENST00000361309 CFAP73A6NFT4 308 aa18.36■□□□□ 0.53
CD47-202ENST00000361309 B9A039 149 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms