RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 LINC01387J3KSC0 135 aa22.8■■□□□ 1.24
SSBP3-202ENST00000357475 MAKP20794 623 aa22.8■■□□□ 1.24
SSBP3-202ENST00000357475 FPR1P21462 350 aa22.8■■□□□ 1.24
SSBP3-202ENST00000357475 MICAQ29983 383 aa22.8■■□□□ 1.24
SSBP3-202ENST00000357475 KRTCAP3Q53RY4 240 aa22.8■■□□□ 1.24
SSBP3-202ENST00000357475 ARHGAP11AQ6P4F7 1023 aa22.8■■□□□ 1.24
SSBP3-202ENST00000357475 ZGRF1Q86YA3 2104 aa22.8■■□□□ 1.24
SSBP3-202ENST00000357475 OR5M9Q8NGP3 310 aa22.8■■□□□ 1.24
SSBP3-202ENST00000357475 SEC14L4Q9UDX3 406 aa22.8■■□□□ 1.24
SSBP3-202ENST00000357475 TMCC3Q9ULS5 477 aa22.8■■□□□ 1.24
SSBP3-202ENST00000357475 CAMK2AQ9UQM7 478 aa22.8■■□□□ 1.24
SSBP3-202ENST00000357475 TRAV36DV7A0A075B6V5 113 aa22.79■■□□□ 1.24
SSBP3-202ENST00000357475 CCNB2O95067 398 aa22.79■■□□□ 1.24
SSBP3-202ENST00000357475 IFI30P13284 250 aa22.79■■□□□ 1.24
SSBP3-202ENST00000357475 GCKP35557 465 aa22.79■■□□□ 1.24
SSBP3-202ENST00000357475 GPR4P46093 362 aa22.79■■□□□ 1.24
SSBP3-202ENST00000357475 OMPP47874 163 aa22.79■■□□□ 1.24
SSBP3-202ENST00000357475 SHQ1Q6PI26 577 aaKnown RBP22.79■■□□□ 1.24
SSBP3-202ENST00000357475 SLC46A3Q7Z3Q1 461 aa22.79■■□□□ 1.24
SSBP3-202ENST00000357475 ZER1Q7Z7L7 766 aa22.79■■□□□ 1.24
SSBP3-202ENST00000357475 LRRC17Q8N6Y2 441 aa22.79■■□□□ 1.24
SSBP3-202ENST00000357475 FAM46AQ96IP4 442 aaKnown RBP22.79■■□□□ 1.24
SSBP3-202ENST00000357475 ZNF845Q96IR2 970 aaPredicted RBP22.79■■□□□ 1.24
SSBP3-202ENST00000357475 SRXN1Q9BYN0 137 aa22.79■■□□□ 1.24
SSBP3-202ENST00000357475 POTEKPQ9BYX7 375 aa22.79■■□□□ 1.24
SSBP3-202ENST00000357475 DCLRE1BQ9H816 532 aa22.79■■□□□ 1.24
SSBP3-202ENST00000357475 PDP1Q9P0J1 537 aaPredicted RBP22.79■■□□□ 1.24
SSBP3-202ENST00000357475 OAZ3Q9UMX2 235 aa22.79■■□□□ 1.24
SSBP3-202ENST00000357475 FTCDNL1E5RQL4 147 aa22.78■■□□□ 1.24
SSBP3-202ENST00000357475 PDLIM1O00151 329 aa22.78■■□□□ 1.24
SSBP3-202ENST00000357475 OR10H3O60404 316 aa22.78■■□□□ 1.24
SSBP3-202ENST00000357475 CH25HO95992 272 aa22.78■■□□□ 1.24
SSBP3-202ENST00000357475 BGLAPP02818 100 aa22.78■■□□□ 1.24
SSBP3-202ENST00000357475 ZNF23P17027 643 aa22.78■■□□□ 1.24
SSBP3-202ENST00000357475 MAP2K6P52564 334 aa22.78■■□□□ 1.24
SSBP3-202ENST00000357475 PRKCDQ05655 676 aa22.78■■□□□ 1.24
SSBP3-202ENST00000357475 PGBD2Q6P3X8 592 aa22.78■■□□□ 1.24
SSBP3-202ENST00000357475 OR10G2Q8NGC3 310 aa22.78■■□□□ 1.24
SSBP3-202ENST00000357475 OR5K1Q8NHB7 308 aa22.78■■□□□ 1.24
SSBP3-202ENST00000357475 SLC25A36Q96CQ1 311 aa22.78■■□□□ 1.24
SSBP3-202ENST00000357475 SLC19A3Q9BZV2 496 aa22.78■■□□□ 1.24
SSBP3-202ENST00000357475 PNPLA3Q9NST1 481 aa22.78■■□□□ 1.24
SSBP3-202ENST00000357475 LIPT2A6NK58 231 aa22.77■■□□□ 1.24
SSBP3-202ENST00000357475 KDM4EB2RXH2 506 aaPredicted RBP22.77■■□□□ 1.24
SSBP3-202ENST00000357475 AHSA1O95433 338 aa22.77■■□□□ 1.24
SSBP3-202ENST00000357475 CPN1P15169 458 aa22.77■■□□□ 1.24
SSBP3-202ENST00000357475 IDUAP35475 653 aa22.77■■□□□ 1.24
SSBP3-202ENST00000357475 EIF1AXP47813 144 aaKnown RBP22.77■■□□□ 1.24
SSBP3-202ENST00000357475 DIO1P49895 249 aa22.77■■□□□ 1.24
SSBP3-202ENST00000357475 CTBP2P56545 445 aa22.77■■□□□ 1.24
SSBP3-202ENST00000357475 OR7A5Q15622 319 aa22.77■■□□□ 1.24
SSBP3-202ENST00000357475 BCL2A1Q16548 175 aa22.77■■□□□ 1.24
SSBP3-202ENST00000357475 ZNF74Q16587 644 aa22.77■■□□□ 1.24
SSBP3-202ENST00000357475 HBMQ6B0K9 141 aa22.77■■□□□ 1.24
SSBP3-202ENST00000357475 GFRALQ6UXV0 394 aa22.77■■□□□ 1.24
SSBP3-202ENST00000357475 ESPNLQ6ZVH7 1005 aa22.77■■□□□ 1.24
SSBP3-202ENST00000357475 RNF113BQ8IZP6 322 aaKnown RBP22.77■■□□□ 1.24
SSBP3-202ENST00000357475 OR10D3Q8NH80 312 aa22.77■■□□□ 1.24
SSBP3-202ENST00000357475 OR2V1Q8NHB1 315 aa22.77■■□□□ 1.24
SSBP3-202ENST00000357475 GIPC3Q8TF64 312 aa22.77■■□□□ 1.24
SSBP3-202ENST00000357475 BPIFA2Q96DR5 249 aa22.77■■□□□ 1.24
SSBP3-202ENST00000357475 PRDM14Q9GZV8 571 aa22.77■■□□□ 1.24
SSBP3-202ENST00000357475 RNPEPL1Q9HAU8 725 aa22.77■■□□□ 1.24
SSBP3-202ENST00000357475 C6orf203Q9P0P8 240 aaPredicted RBP22.77■■□□□ 1.24
SSBP3-202ENST00000357475 STX18Q9P2W9 335 aaKnown RBP22.77■■□□□ 1.24
SSBP3-202ENST00000357475 GJE1A6NN92 205 aa22.77■■□□□ 1.24
SSBP3-202ENST00000357475 CDC42EP2O14613 210 aa22.77■■□□□ 1.24
SSBP3-202ENST00000357475 CXCL13O43927 109 aa22.77■■□□□ 1.24
SSBP3-202ENST00000357475 ATP6V1G2O95670 118 aa22.77■■□□□ 1.24
SSBP3-202ENST00000357475 GASTP01350 101 aa22.77■■□□□ 1.24
SSBP3-202ENST00000357475 POU2F1P14859 743 aa22.77■■□□□ 1.24
SSBP3-202ENST00000357475 PTGS2P35354 604 aa22.77■■□□□ 1.24
SSBP3-202ENST00000357475 GXYLT1Q4G148 440 aa22.77■■□□□ 1.24
SSBP3-202ENST00000357475 SOWAHCQ53LP3 525 aaPredicted RBP22.77■■□□□ 1.24
SSBP3-202ENST00000357475 EMC4Q5J8M3 183 aa22.77■■□□□ 1.24
SSBP3-202ENST00000357475 TMPPEQ6ZT21 453 aa22.77■■□□□ 1.24
SSBP3-202ENST00000357475 RRM2BQ7LG56 351 aa22.77■■□□□ 1.24
SSBP3-202ENST00000357475 C10orf53Q8N6V4 93 aa22.77■■□□□ 1.24
SSBP3-202ENST00000357475 AQP11Q8NBQ7 271 aa22.77■■□□□ 1.24
SSBP3-202ENST00000357475 PIGXQ8TBF5 258 aa22.77■■□□□ 1.24
SSBP3-202ENST00000357475 MIB2Q96AX9 1013 aa22.77■■□□□ 1.24
SSBP3-202ENST00000357475 SARAFQ96BY9 339 aa22.77■■□□□ 1.24
SSBP3-202ENST00000357475 SGTBQ96EQ0 304 aa22.77■■□□□ 1.24
SSBP3-202ENST00000357475 CIB1Q99828 191 aa22.77■■□□□ 1.24
SSBP3-202ENST00000357475 TUBA1CQ9BQE3 449 aa22.77■■□□□ 1.24
SSBP3-202ENST00000357475 STOML1Q9UBI4 398 aa22.77■■□□□ 1.24
SSBP3-202ENST00000357475 HDGFL3Q9Y3E1 203 aa22.77■■□□□ 1.24
SSBP3-202ENST00000357475 IGHV3-15A0A0B4J1V0 119 aa22.76■■□□□ 1.23
SSBP3-202ENST00000357475 ZNF814B7Z6K7 855 aa22.76■■□□□ 1.23
SSBP3-202ENST00000357475 G3V2T6 193 aa22.76■■□□□ 1.23
SSBP3-202ENST00000357475 C1QL1O75973 258 aa22.76■■□□□ 1.23
SSBP3-202ENST00000357475 EDN3P14138 238 aa22.76■■□□□ 1.23
SSBP3-202ENST00000357475 CLK1P49759 484 aaKnown RBP22.76■■□□□ 1.23
SSBP3-202ENST00000357475 OR2B6P58173 313 aa22.76■■□□□ 1.23
SSBP3-202ENST00000357475 OTUD3Q5T2D3 398 aaPredicted RBP22.76■■□□□ 1.23
SSBP3-202ENST00000357475 FAM69AQ5T7M9 428 aa22.76■■□□□ 1.23
SSBP3-202ENST00000357475 OSTF1Q92882 214 aa22.76■■□□□ 1.23
SSBP3-202ENST00000357475 FEVQ99581 238 aa22.76■■□□□ 1.23
SSBP3-202ENST00000357475 NIPSNAP1Q9BPW8 284 aa22.76■■□□□ 1.23
SSBP3-202ENST00000357475 OR14I1A6ND48 311 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms