RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 KHSRPQ92945 711 aaKnown RBP eCLIP16.77■□□□□ 0.283e-10■■■■■ 30.4
COL18A1-202ENST00000355480 GIMAP5Q96F15 307 aa16.77■□□□□ 0.28
COL18A1-202ENST00000355480 SERTAD4Q9NUC0 356 aa16.77■□□□□ 0.28
COL18A1-202ENST00000355480 DDAH2O95865 285 aa16.77■□□□□ 0.27
COL18A1-202ENST00000355480 ALDOCP09972 364 aaKnown RBP16.77■□□□□ 0.27
COL18A1-202ENST00000355480 SELPLGQ14242 412 aa16.77■□□□□ 0.27
COL18A1-202ENST00000355480 GK2Q14410 553 aaPredicted RBP16.77■□□□□ 0.27
COL18A1-202ENST00000355480 FGFBP1Q14512 234 aa16.77■□□□□ 0.27
COL18A1-202ENST00000355480 TMEM64Q6YI46 380 aa16.77■□□□□ 0.27
COL18A1-202ENST00000355480 LCORQ96JN0 433 aaPredicted RBP16.77■□□□□ 0.27
COL18A1-202ENST00000355480 PFDN5Q99471 154 aa16.77■□□□□ 0.27
COL18A1-202ENST00000355480 C1orf198Q9H425 327 aa16.77■□□□□ 0.27
COL18A1-202ENST00000355480 C1GALT1Q9NS00 363 aa16.77■□□□□ 0.27
COL18A1-202ENST00000355480 EHFQ9NZC4 300 aa16.77■□□□□ 0.27
COL18A1-202ENST00000355480 ATPIF1Q9UII2 106 aa16.77■□□□□ 0.27
COL18A1-202ENST00000355480 SEC14L2O76054 403 aa16.77■□□□□ 0.27
COL18A1-202ENST00000355480 OPRD1P41143 372 aa16.77■□□□□ 0.27
COL18A1-202ENST00000355480 TSPAN31Q12999 210 aa16.77■□□□□ 0.27
COL18A1-202ENST00000355480 RNF113BQ8IZP6 322 aaKnown RBP16.77■□□□□ 0.27
COL18A1-202ENST00000355480 ZFPM2Q8WW38 1151 aa16.77■□□□□ 0.27
COL18A1-202ENST00000355480 DEDD2Q8WXF8 326 aa16.77■□□□□ 0.27
COL18A1-202ENST00000355480 ZNF597Q96LX8 424 aa16.77■□□□□ 0.27
COL18A1-202ENST00000355480 TRBV4-1A0A0J9YWV2 114 aa16.76■□□□□ 0.27
COL18A1-202ENST00000355480 ANKRD33BA6NCL7 494 aa16.76■□□□□ 0.27
COL18A1-202ENST00000355480 BOLA2-SMG1P6H3BVE0 249 aa16.76■□□□□ 0.27
COL18A1-202ENST00000355480 OR7C1O76099 320 aaPredicted RBP16.76■□□□□ 0.27
COL18A1-202ENST00000355480 UTS2O95399 124 aa16.76■□□□□ 0.27
COL18A1-202ENST00000355480 MMP12P39900 470 aa16.76■□□□□ 0.27
COL18A1-202ENST00000355480 SLC14A1Q13336 389 aa16.76■□□□□ 0.27
COL18A1-202ENST00000355480 HSF5Q4G112 596 aaPredicted RBP16.76■□□□□ 0.27
COL18A1-202ENST00000355480 TRNP1Q6NT89 227 aa16.76■□□□□ 0.27
COL18A1-202ENST00000355480 SLC35D2Q76EJ3 337 aa16.76■□□□□ 0.27
COL18A1-202ENST00000355480 ARL11Q969Q4 196 aa16.76■□□□□ 0.27
COL18A1-202ENST00000355480 KCND3Q9UK17 655 aa16.76■□□□□ 0.27
COL18A1-202ENST00000355480 PADI1Q9ULC6 663 aa16.76■□□□□ 0.27
COL18A1-202ENST00000355480 TK1P04183 234 aa16.76■□□□□ 0.27
COL18A1-202ENST00000355480 FCGR2AP12318 317 aa16.76■□□□□ 0.27
COL18A1-202ENST00000355480 REEP5Q00765 189 aa16.76■□□□□ 0.27
COL18A1-202ENST00000355480 LEXMQ3ZCV2 418 aa16.76■□□□□ 0.27
COL18A1-202ENST00000355480 PIWIL3Q7Z3Z3 882 aaKnown RBP16.76■□□□□ 0.27
COL18A1-202ENST00000355480 B3GNT8Q7Z7M8 397 aa16.76■□□□□ 0.27
COL18A1-202ENST00000355480 ZNF679Q8IYX0 411 aa16.76■□□□□ 0.27
COL18A1-202ENST00000355480 OR13H1Q8NG92 308 aa16.76■□□□□ 0.27
COL18A1-202ENST00000355480 ZNF286AQ9HBT8 521 aa16.76■□□□□ 0.27
COL18A1-202ENST00000355480 SLAMF8Q9P0V8 285 aa16.76■□□□□ 0.27
COL18A1-202ENST00000355480 ZNF281Q9Y2X9 895 aa16.76■□□□□ 0.27
COL18A1-202ENST00000355480 F8W036 122 aa16.76■□□□□ 0.27
COL18A1-202ENST00000355480 UPK1BO75841 260 aa16.76■□□□□ 0.27
COL18A1-202ENST00000355480 RACK1P63244 317 aaKnown RBP16.76■□□□□ 0.27
COL18A1-202ENST00000355480 BLOC1S1P78537 153 aa16.76■□□□□ 0.27
COL18A1-202ENST00000355480 C17orf67Q0P5P2 114 aa16.76■□□□□ 0.27
COL18A1-202ENST00000355480 MED25Q71SY5 747 aa16.76■□□□□ 0.27
COL18A1-202ENST00000355480 NXPE3Q969Y0 559 aa16.76■□□□□ 0.27
COL18A1-202ENST00000355480 MYH13Q9UKX3 1938 aa16.76■□□□□ 0.27
COL18A1-202ENST00000355480 TLCD2A6NGC4 264 aa16.76■□□□□ 0.27
COL18A1-202ENST00000355480 A8MXE2 369 aa16.76■□□□□ 0.27
COL18A1-202ENST00000355480 OR7A17O14581 309 aa16.76■□□□□ 0.27
COL18A1-202ENST00000355480 OR8G3PP0DMU2 310 aa16.76■□□□□ 0.27
COL18A1-202ENST00000355480 MTCP1P56278 107 aa16.76■□□□□ 0.27
COL18A1-202ENST00000355480 CARD18P57730 90 aa16.76■□□□□ 0.27
COL18A1-202ENST00000355480 COMMD7Q86VX2 200 aa16.76■□□□□ 0.27
COL18A1-202ENST00000355480 TMEM178AQ8NBL3 297 aa16.76■□□□□ 0.27
COL18A1-202ENST00000355480 OR7G2Q8NG99 324 aa16.76■□□□□ 0.27
COL18A1-202ENST00000355480 GAPDHSO14556 408 aaPredicted RBP16.75■□□□□ 0.27
COL18A1-202ENST00000355480 MT-ND4P03905 459 aa16.75■□□□□ 0.27
COL18A1-202ENST00000355480 GAB1Q13480 694 aa16.75■□□□□ 0.27
COL18A1-202ENST00000355480 CCDC88AQ3V6T2 1871 aa16.75■□□□□ 0.27
COL18A1-202ENST00000355480 SLC36A2Q495M3 483 aa16.75■□□□□ 0.27
COL18A1-202ENST00000355480 METAP1DQ6UB28 335 aaPredicted RBP16.75■□□□□ 0.27
COL18A1-202ENST00000355480 C5orf46Q6UWT4 87 aa16.75■□□□□ 0.27
COL18A1-202ENST00000355480 SLCO4C1Q6ZQN7 724 aa16.75■□□□□ 0.27
COL18A1-202ENST00000355480 ZBTB8AQ96BR9 441 aa16.75■□□□□ 0.27
COL18A1-202ENST00000355480 COQ10AQ96MF6 247 aa16.75■□□□□ 0.27
COL18A1-202ENST00000355480 PIGQQ9BRB3 760 aa16.75■□□□□ 0.27
COL18A1-202ENST00000355480 TRAPPC2LQ9UL33 140 aa16.75■□□□□ 0.27
COL18A1-202ENST00000355480 MYH1P12882 1939 aa16.75■□□□□ 0.27
COL18A1-202ENST00000355480 GPR176Q14439 515 aa16.75■□□□□ 0.27
COL18A1-202ENST00000355480 OR1J2Q8NGS2 313 aa16.75■□□□□ 0.27
COL18A1-202ENST00000355480 SMIM3Q9BZL3 60 aa16.75■□□□□ 0.27
COL18A1-202ENST00000355480 AGPAT2O15120 278 aa16.75■□□□□ 0.27
COL18A1-202ENST00000355480 TACR1P25103 407 aa16.75■□□□□ 0.27
COL18A1-202ENST00000355480 IDH3GP51553 393 aaPredicted RBP16.75■□□□□ 0.27
COL18A1-202ENST00000355480 ZNF691Q5VV52 312 aa16.75■□□□□ 0.27
COL18A1-202ENST00000355480 RPL22L1Q6P5R6 122 aaKnown RBP16.75■□□□□ 0.27
COL18A1-202ENST00000355480 OR8J2Q8NGG1 315 aa16.75■□□□□ 0.27
COL18A1-202ENST00000355480 SLC38A5Q8WUX1 472 aa16.75■□□□□ 0.27
COL18A1-202ENST00000355480 C17orf50Q8WW18 174 aa16.75■□□□□ 0.27
COL18A1-202ENST00000355480 HSD17B8Q92506 261 aa16.75■□□□□ 0.27
COL18A1-202ENST00000355480 TFAP2CQ92754 450 aa16.75■□□□□ 0.27
COL18A1-202ENST00000355480 TM7SF3Q9NS93 570 aa16.75■□□□□ 0.27
COL18A1-202ENST00000355480 TMED7-TICAM2A0A0A6YYA0 188 aa16.75■□□□□ 0.27
COL18A1-202ENST00000355480 TCRBV3S1A0A5B6 114 aa16.75■□□□□ 0.27
COL18A1-202ENST00000355480 PRKRAO75569 313 aaKnown RBP16.75■□□□□ 0.27
COL18A1-202ENST00000355480 ENPP1P22413 925 aa16.75■□□□□ 0.27
COL18A1-202ENST00000355480 GIPRP48546 466 aa16.75■□□□□ 0.27
COL18A1-202ENST00000355480 MED20Q9H944 212 aa16.75■□□□□ 0.27
COL18A1-202ENST00000355480 TMED7Q9Y3B3 224 aa16.75■□□□□ 0.27
COL18A1-202ENST00000355480 A0A1W2PPV4 95 aa16.75■□□□□ 0.27
COL18A1-202ENST00000355480 KLKB1P03952 638 aa16.75■□□□□ 0.27
COL18A1-202ENST00000355480 IKZF1Q13422 519 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms