RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 DCAF4L2Q8NA75 395 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 TESCQ96BS2 214 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 MS4A6EQ96DS6 147 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 ADAP2Q9NPF8 381 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 ACAD8Q9UKU7 415 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 TMEM5Q9Y2B1 443 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 RGS10O43665 173 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 FTH1P19P0C7X4 201 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 NFYBP25208 207 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 TIA1P31483 386 aaKnown RBP eCLIP5.07□□□□□ -1.62e-6■■■■□ 24.8
CD47-201ENST00000355354 KCNJ5P48544 419 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 PTH2RP49190 550 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 ASCL1P50553 236 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 CDH4P55283 916 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 CDK5Q00535 292 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 NKAIN2Q5VXU1 208 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 CD200R1LQ6Q8B3 271 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 ZNF655Q8N720 491 aaPredicted RBP5.07□□□□□ -1.6
CD47-201ENST00000355354 ACOT4Q8N9L9 421 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 OR8J3Q8NGG0 315 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 GANCQ8TET4 914 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 SEC22AQ96IW7 307 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 SECISBP2Q96T21 854 aaKnown RBP5.07□□□□□ -1.6
CD47-201ENST00000355354 TMEM9BQ9NQ34 198 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 MRPS18AQ9NVS2 196 aaKnown RBP5.07□□□□□ -1.6
CD47-201ENST00000355354 DNAH10Q8IVF4 4471 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 H0YIV9 168 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 FGF10O15520 208 aaPredicted RBP5.07□□□□□ -1.6
CD47-201ENST00000355354 VPS26AO75436 327 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 PNLIPP16233 465 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 CCR5P51681 352 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 HNF4GQ14541 408 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 INO80DQ53TQ3 878 aaPredicted RBP5.07□□□□□ -1.6
CD47-201ENST00000355354 MBOAT2Q6ZWT7 520 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 OR8H2Q8N162 312 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 SLC25A45Q8N413 288 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 OR10S1Q8NGN2 331 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 LILRB4Q8NHJ6 448 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 ZNF566Q969W8 418 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 FRMD8P1Q9BZ68 369 aaPredicted RBP5.07□□□□□ -1.6
CD47-201ENST00000355354 OR51I1Q9H343 314 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 MRM3Q9HC36 420 aaKnown RBP5.07□□□□□ -1.6
CD47-201ENST00000355354 TIMMDC1Q9NPL8 285 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 PARPBPQ9NWS1 579 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 ENPP4Q9Y6X5 453 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 QSOX1O00391 747 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 ALDOBP05062 364 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 ARAFP10398 606 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 OGNP20774 298 aaKnown RBP5.06□□□□□ -1.6
CD47-201ENST00000355354 FPR1P21462 350 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 RAD52P43351 418 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 EVX1P49640 407 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 NXPH1P58417 271 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 C12orf73Q69YU5 71 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 ZNF550Q7Z398 422 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 DDHD1Q8NEL9 900 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 OR9A4Q8NGU2 314 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 OR4K13Q8NH42 304 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 UBALD1Q8TB05 177 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 GHSRQ92847 366 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 TXNDC15Q96J42 360 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 OR2A5Q96R48 311 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 LYSMD1Q96S90 227 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 APOL4Q9BPW4 351 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 TSSK6Q9BXA6 273 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 C1QTNF7Q9BXJ2 289 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 CHIAQ9BZP6 476 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 GNGT2O14610 69 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 CLDN11O75508 207 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 CT45A8P0DMV1 189 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 CT45A9P0DMV2 189 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 PCSK2P16519 638 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 NTSR1P30989 418 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 MAP2K3P46734 347 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 FAPQ12884 760 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 CT45A2Q5DJT8 189 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 TRMT11Q7Z4G4 463 aaKnown RBP5.06□□□□□ -1.6
CD47-201ENST00000355354 ASB12Q8WXK4 309 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 A0A1W2PRB8 838 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 H0YAE9 185 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 BHLHE40O14503 412 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 ARSBP15848 533 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 CPN2P22792 545 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 PTBP1P26599 531 aaKnown RBP eCLIP5.06□□□□□ -1.63e-10■■■■□ 19.9
CD47-201ENST00000355354 SLC6A1P30531 599 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 ETV6P41212 452 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 SLC1A3P43003 542 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 TTPAP49638 278 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 CRISP1P54107 249 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 ACSM2AQ08AH3 577 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 SCARB2Q14108 478 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 ACSM2BQ68CK6 577 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 SLC29A4Q7RTT9 530 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 CBLN2Q8IUK8 224 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 OR6V1Q8N148 313 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 ZNF680Q8NEM1 530 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 OR56B4Q8NH76 319 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 TSLPQ969D9 159 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 OR2M2Q96R28 347 aa5.06□□□□□ -1.6
CD47-201ENST00000355354 TRAV14DV4A0A0A6YYC5 116 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms