RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 HMGB3O15347 200 aaKnown RBP13.78□□□□□ -0.2
COL17A1-201ENST00000353479 NUDT21O43809 227 aaKnown RBP13.78□□□□□ -0.2
COL17A1-201ENST00000353479 PIP5K1CO60331 668 aa13.78□□□□□ -0.2
COL17A1-201ENST00000353479 NPR2P20594 1047 aa13.78□□□□□ -0.2
COL17A1-201ENST00000353479 PCBD1P61457 104 aa13.78□□□□□ -0.2
COL17A1-201ENST00000353479 EMX1Q04741 257 aaPredicted RBP13.78□□□□□ -0.2
COL17A1-201ENST00000353479 POGLUT1Q8NBL1 392 aa13.78□□□□□ -0.2
COL17A1-201ENST00000353479 RSPRY1Q96DX4 576 aa13.78□□□□□ -0.2
COL17A1-201ENST00000353479 OR10A4Q9H209 315 aa13.78□□□□□ -0.2
COL17A1-201ENST00000353479 SPNS1Q9H2V7 528 aa13.78□□□□□ -0.2
COL17A1-201ENST00000353479 HMGN4O00479 90 aa13.78□□□□□ -0.2
COL17A1-201ENST00000353479 RGS6P49758 472 aa13.78□□□□□ -0.2
COL17A1-201ENST00000353479 SIRPAP78324 504 aa13.78□□□□□ -0.2
COL17A1-201ENST00000353479 TMEM244Q5VVB8 128 aa13.78□□□□□ -0.2
COL17A1-201ENST00000353479 RBM45Q8IUH3 476 aaKnown RBP13.78□□□□□ -0.2
COL17A1-201ENST00000353479 CMIPQ8IY22 773 aa13.78□□□□□ -0.2
COL17A1-201ENST00000353479 OR5M1Q8NGP8 315 aa13.78□□□□□ -0.2
COL17A1-201ENST00000353479 NDUFAF4Q9P032 175 aa13.78□□□□□ -0.2
COL17A1-201ENST00000353479 ZSCAN5BA6NJL1 495 aa13.78□□□□□ -0.2
COL17A1-201ENST00000353479 EIF1P41567 113 aaKnown RBP13.78□□□□□ -0.2
COL17A1-201ENST00000353479 BIDP55957 195 aa13.78□□□□□ -0.2
COL17A1-201ENST00000353479 ATXN7L3Q14CW9 347 aaPredicted RBP13.78□□□□□ -0.2
COL17A1-201ENST00000353479 ZNF181Q2M3W8 571 aa13.78□□□□□ -0.2
COL17A1-201ENST00000353479 PRICKLE2Q7Z3G6 844 aa13.78□□□□□ -0.2
COL17A1-201ENST00000353479 TRAPPC6BQ86SZ2 158 aa13.78□□□□□ -0.2
COL17A1-201ENST00000353479 OR8H3Q8N146 312 aa13.78□□□□□ -0.2
COL17A1-201ENST00000353479 NMNAT3Q96T66 252 aa13.78□□□□□ -0.2
COL17A1-201ENST00000353479 KCNIP1Q9NZI2 227 aa13.78□□□□□ -0.2
COL17A1-201ENST00000353479 C7orf72A4D263 438 aa13.77□□□□□ -0.2
COL17A1-201ENST00000353479 TNFSF15O95150 251 aa13.77□□□□□ -0.2
COL17A1-201ENST00000353479 UGT2B10P36537 528 aa13.77□□□□□ -0.2
COL17A1-201ENST00000353479 DUSP7Q16829 419 aa13.77□□□□□ -0.2
COL17A1-201ENST00000353479 SLC35D2Q76EJ3 337 aa13.77□□□□□ -0.2
COL17A1-201ENST00000353479 OR9K2Q8NGE7 335 aa13.77□□□□□ -0.2
COL17A1-201ENST00000353479 BABAM2Q9NXR7 383 aa13.77□□□□□ -0.2
COL17A1-201ENST00000353479 PIAS2O75928 621 aa13.77□□□□□ -0.2
COL17A1-201ENST00000353479 DIRAS3O95661 229 aa13.77□□□□□ -0.2
COL17A1-201ENST00000353479 ENPP1P22413 925 aa13.77□□□□□ -0.2
COL17A1-201ENST00000353479 CRHBPP24387 322 aa13.77□□□□□ -0.2
COL17A1-201ENST00000353479 GPR50Q13585 617 aa13.77□□□□□ -0.2
COL17A1-201ENST00000353479 C3orf33Q6P1S2 294 aa13.77□□□□□ -0.2
COL17A1-201ENST00000353479 SH2D5Q6ZV89 423 aa13.77□□□□□ -0.2
COL17A1-201ENST00000353479 ZADH2Q8N4Q0 377 aa13.77□□□□□ -0.2
COL17A1-201ENST00000353479 ARL5BQ96KC2 179 aa13.77□□□□□ -0.2
COL17A1-201ENST00000353479 SDF2Q99470 211 aa13.77□□□□□ -0.2
COL17A1-201ENST00000353479 ZNF593O00488 134 aaPredicted RBP13.77□□□□□ -0.21
COL17A1-201ENST00000353479 NME1P15531 152 aaKnown RBP13.77□□□□□ -0.21
COL17A1-201ENST00000353479 HOXB9P17482 250 aaPredicted RBP13.77□□□□□ -0.21
COL17A1-201ENST00000353479 OR2G6Q5TZ20 316 aa13.77□□□□□ -0.21
COL17A1-201ENST00000353479 HBMQ6B0K9 141 aa13.77□□□□□ -0.21
COL17A1-201ENST00000353479 PYHIN1Q6K0P9 492 aa13.77□□□□□ -0.21
COL17A1-201ENST00000353479 SPRED1Q7Z699 444 aa13.77□□□□□ -0.21
COL17A1-201ENST00000353479 NIPSNAP1Q9BPW8 284 aa13.77□□□□□ -0.21
COL17A1-201ENST00000353479 INPP5EQ9NRR6 644 aa13.77□□□□□ -0.21
COL17A1-201ENST00000353479 ITGB1BP2Q9UKP3 347 aa13.77□□□□□ -0.21
COL17A1-201ENST00000353479 HHLA2Q9UM44 414 aa13.77□□□□□ -0.21
COL17A1-201ENST00000353479 FAM166BA8MTA8 275 aa13.77□□□□□ -0.21
COL17A1-201ENST00000353479 BCAS1O75363 584 aaPredicted RBP13.77□□□□□ -0.21
COL17A1-201ENST00000353479 SFTPBP07988 381 aa13.77□□□□□ -0.21
COL17A1-201ENST00000353479 MLC1Q15049 377 aa13.77□□□□□ -0.21
COL17A1-201ENST00000353479 BCORP1Q8N888 145 aa13.77□□□□□ -0.21
COL17A1-201ENST00000353479 TMEM102Q8N9M5 508 aaPredicted RBP13.77□□□□□ -0.21
COL17A1-201ENST00000353479 PCED1AQ9H1Q7 454 aa13.77□□□□□ -0.21
COL17A1-201ENST00000353479 MOV10Q9HCE1 1003 aaKnown RBP13.77□□□□□ -0.21
COL17A1-201ENST00000353479 PRKNO60260 465 aaPredicted RBP13.77□□□□□ -0.21
COL17A1-201ENST00000353479 GPR85P60893 370 aa13.77□□□□□ -0.21
COL17A1-201ENST00000353479 PSPHP78330 225 aa13.77□□□□□ -0.21
COL17A1-201ENST00000353479 LRRC37A5PQ49AS3 106 aa13.77□□□□□ -0.21
COL17A1-201ENST00000353479 RNASE10Q5GAN6 216 aaKnown RBP13.77□□□□□ -0.21
COL17A1-201ENST00000353479 FAM57BQ71RH2 274 aa13.77□□□□□ -0.21
COL17A1-201ENST00000353479 ALG12Q9BV10 488 aa13.77□□□□□ -0.21
COL17A1-201ENST00000353479 SEMA4GQ9NTN9 838 aa13.77□□□□□ -0.21
COL17A1-201ENST00000353479 MTCH2Q9Y6C9 303 aa13.77□□□□□ -0.21
COL17A1-201ENST00000353479 CD22P20273 847 aa13.76□□□□□ -0.21
COL17A1-201ENST00000353479 HTR5AP47898 357 aa13.76□□□□□ -0.21
COL17A1-201ENST00000353479 RUNX2Q13950 521 aa13.76□□□□□ -0.21
COL17A1-201ENST00000353479 CDK10Q15131 360 aa13.76□□□□□ -0.21
COL17A1-201ENST00000353479 GDPGP1Q6ZNW5 385 aa13.76□□□□□ -0.21
COL17A1-201ENST00000353479 DCDC5Q6ZRR9 648 aa13.76□□□□□ -0.21
COL17A1-201ENST00000353479 OR5D14Q8NGL3 314 aa13.76□□□□□ -0.21
COL17A1-201ENST00000353479 PHOX2BQ99453 314 aa13.76□□□□□ -0.21
COL17A1-201ENST00000353479 COPZ2Q9P299 210 aa13.76□□□□□ -0.21
COL17A1-201ENST00000353479 A8MV72 311 aaPredicted RBP13.76□□□□□ -0.21
COL17A1-201ENST00000353479 ARHGAP11BQ3KRB8 267 aa13.76□□□□□ -0.21
COL17A1-201ENST00000353479 DNAAF1Q8NEP3 725 aa13.76□□□□□ -0.21
COL17A1-201ENST00000353479 ZNF350Q9GZX5 532 aa13.76□□□□□ -0.21
COL17A1-201ENST00000353479 TRIP12Q14669 1992 aaPredicted RBP13.76□□□□□ -0.21
COL17A1-201ENST00000353479 LILRA5A6NI73 299 aa13.76□□□□□ -0.21
COL17A1-201ENST00000353479 A8MVM7 634 aa13.76□□□□□ -0.21
COL17A1-201ENST00000353479 H3BMQ9 156 aa13.76□□□□□ -0.21
COL17A1-201ENST00000353479 CHP2O43745 196 aa13.76□□□□□ -0.21
COL17A1-201ENST00000353479 OR8G3PP0DMU2 310 aa13.76□□□□□ -0.21
COL17A1-201ENST00000353479 DRD3P35462 400 aa13.76□□□□□ -0.21
COL17A1-201ENST00000353479 FZD2Q14332 565 aa13.76□□□□□ -0.21
COL17A1-201ENST00000353479 SFRP4Q6FHJ7 346 aaPredicted RBP13.76□□□□□ -0.21
COL17A1-201ENST00000353479 TMEM205Q6UW68 189 aa13.76□□□□□ -0.21
COL17A1-201ENST00000353479 ASB17Q8WXJ9 295 aa13.76□□□□□ -0.21
COL17A1-201ENST00000353479 COG8Q96MW5 612 aa13.76□□□□□ -0.21
COL17A1-201ENST00000353479 EMC9Q9Y3B6 208 aa13.76□□□□□ -0.21
COL17A1-201ENST00000353479 IGHV1OR15-9A0A0B4J2B8 117 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms