RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 RFLNBQ8N5W9 214 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 HAVCR2Q8TDQ0 301 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 ARL5BQ96KC2 179 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 CNTNAP3BQ96NU0 1288 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 MACROD1Q9BQ69 325 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 C1QTNF2Q9BXJ5 285 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 SLITRK2Q9H156 845 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 CWH43Q9H720 699 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 ACSS1Q9NUB1 689 aaPredicted RBP7.05□□□□□ -1.28
BRCA1-201ENST00000352993 MOKQ9UQ07 419 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 ENTPD4Q9Y227 616 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 ANKRD20A5PA0PJZ0 165 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 C1orf196B1AJZ1 125 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 CTDSPLO15194 276 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 TMPRSS11DO60235 418 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 FGF18O76093 207 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 PPP1R3DO95685 299 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 CXCL14O95715 111 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 CKMP06732 381 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 NT5EP21589 574 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 AGTR1P30556 359 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 GATMP50440 423 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 NR0B1P51843 470 aaKnown RBP7.05□□□□□ -1.28
BRCA1-201ENST00000352993 POLR2LP62875 67 aaKnown RBP7.05□□□□□ -1.28
BRCA1-201ENST00000352993 FKBP1BP68106 108 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 RAB33AQ14088 237 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 AGERQ15109 404 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 ZNF528Q3MIS6 628 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 MRGPREQ86SM8 312 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 ASPGQ86U10 573 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 NAA40Q86UY6 237 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 TMPRSS12Q86WS5 348 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 OR13C2Q8NGS9 318 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 ADAMTS15Q8TE58 950 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 DOK4Q8TEW6 326 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 PEX11GQ96HA9 241 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 SLC22A12Q96S37 553 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 NRTNQ99748 197 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 ZNF251Q9BRH9 671 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 PTDSS2Q9BVG9 487 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 GPR174Q9BXC1 333 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 CHST6Q9GZX3 395 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 FKRPQ9H9S5 495 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 TRPV4Q9HBA0 871 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 ZMIZ1Q9ULJ6 1067 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 RPH3AQ9Y2J0 694 aaPredicted RBP7.05□□□□□ -1.28
BRCA1-201ENST00000352993 A0A0D9SG52 128 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 GKN3PP0CG01 181 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 ZNF3P17036 446 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 MPGP29372 298 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 AKR1C3P42330 323 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 NPBWR1P48145 328 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 CAPZA1P52907 286 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 TAS2R20P59543 309 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 FOXK2Q01167 660 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 ZNF85Q03923 595 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 PEA15Q15121 130 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 SCGB2B2Q4G0G5 96 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 FUT10Q6P4F1 479 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 C5orf46Q6UWT4 87 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 MBOAT2Q6ZWT7 520 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 AMER3Q8N944 861 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 INO80EQ8NBZ0 244 aaPredicted RBP7.05□□□□□ -1.28
BRCA1-201ENST00000352993 STEAP2Q8NFT2 490 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 OR4C16Q8NGL9 310 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 OR6K6Q8NGW6 343 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 PFN4Q8NHR9 129 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 DIO2Q92813 273 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 PPP1R16AQ96I34 528 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 PGLYRP3Q96LB9 341 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 HS6ST2Q96MM7 605 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 AIF1LQ9BQI0 150 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 OR2AG1Q9H205 316 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 CAPN10Q9HC96 672 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 MKL2Q9ULH7 1088 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 OR51B4Q9Y5P0 310 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 V9GY05 133 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 DOCK3Q8IZD9 2030 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 TRAV1-2A0A0B4J238 106 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 A0A1B0GVT2 93 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 RFPL4AA6NLU0 287 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 IFITM5A6NNB3 132 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 RFPL4AL1F8VTS6 287 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 CACNB4O00305 520 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-201ENST00000352993 FCMRO60667 390 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 LATS1O95835 1130 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 MAS1P04201 325 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 RPA2P15927 270 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 ZNF14P17017 642 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-201ENST00000352993 PPT1P50897 306 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 TAS2R38P59533 333 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 SIRPAP78324 504 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 PRAMEF17Q5VTA0 474 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 PXKQ7Z7A4 578 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 GLB1L2Q8IW92 636 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 OR10R2Q8NGX6 335 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 STOML3Q8TAV4 291 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 SETD7Q8WTS6 366 aaKnown RBP7.04□□□□□ -1.28
BRCA1-201ENST00000352993 AMDHD1Q96NU7 426 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 TLNRD1Q9H1K6 362 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms