RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 TBC1D3DA0A087WVF3 549 aa22.53■■□□□ 1.2
CPNE1-202ENST00000352393 TBC1D3IA0A087WXS9 549 aa22.53■■□□□ 1.2
CPNE1-202ENST00000352393 A6NCN8 305 aa22.53■■□□□ 1.2
CPNE1-202ENST00000352393 TBC1D3LB9A6J9 549 aa22.53■■□□□ 1.2
CPNE1-202ENST00000352393 G3V3Q6 166 aa22.53■■□□□ 1.2
CPNE1-202ENST00000352393 SSNA1O43805 119 aa22.53■■□□□ 1.2
CPNE1-202ENST00000352393 PEX14O75381 377 aa22.53■■□□□ 1.2
CPNE1-202ENST00000352393 HOXC4P09017 264 aaPredicted RBP22.53■■□□□ 1.2
CPNE1-202ENST00000352393 TBC1D3HP0C7X1 549 aa22.53■■□□□ 1.2
CPNE1-202ENST00000352393 POLR2CP19387 275 aaPredicted RBP22.53■■□□□ 1.2
CPNE1-202ENST00000352393 EDNRAP25101 427 aa22.53■■□□□ 1.2
CPNE1-202ENST00000352393 SEC13P55735 322 aa22.53■■□□□ 1.2
CPNE1-202ENST00000352393 TBC1D3CQ6IPX1 549 aa22.53■■□□□ 1.2
CPNE1-202ENST00000352393 FAM199XQ6PEV8 388 aaPredicted RBP22.53■■□□□ 1.2
CPNE1-202ENST00000352393 ENPP7Q6UWV6 458 aa22.53■■□□□ 1.2
CPNE1-202ENST00000352393 TBC1D3Q8IZP1 549 aaPredicted RBP22.53■■□□□ 1.2
CPNE1-202ENST00000352393 ZNF527Q8NB42 609 aa22.53■■□□□ 1.2
CPNE1-202ENST00000352393 SNX33Q8WV41 574 aa22.53■■□□□ 1.2
CPNE1-202ENST00000352393 PHYHIPQ92561 330 aa22.53■■□□□ 1.2
CPNE1-202ENST00000352393 PDCD1LG2Q9BQ51 273 aa22.53■■□□□ 1.2
CPNE1-202ENST00000352393 COPS3Q9UNS2 423 aa22.53■■□□□ 1.2
CPNE1-202ENST00000352393 RPS10-NUDT3A0A1W2PQS6 291 aa22.52■■□□□ 1.2
CPNE1-202ENST00000352393 ZNF879B4DU55 563 aa22.52■■□□□ 1.2
CPNE1-202ENST00000352393 MCIDASD6RGH6 385 aa22.52■■□□□ 1.2
CPNE1-202ENST00000352393 HPXP02790 462 aa22.52■■□□□ 1.2
CPNE1-202ENST00000352393 FAM69AQ5T7M9 428 aa22.52■■□□□ 1.2
CPNE1-202ENST00000352393 NUDT18Q6ZVK8 323 aa22.52■■□□□ 1.2
CPNE1-202ENST00000352393 CA13Q8N1Q1 262 aa22.52■■□□□ 1.2
CPNE1-202ENST00000352393 OR6C4Q8NGE1 309 aa22.52■■□□□ 1.2
CPNE1-202ENST00000352393 OR10G6Q8NH81 332 aa22.52■■□□□ 1.2
CPNE1-202ENST00000352393 RPS4Y2Q8TD47 263 aa22.52■■□□□ 1.2
CPNE1-202ENST00000352393 DACT3Q96B18 629 aaPredicted RBP22.52■■□□□ 1.2
CPNE1-202ENST00000352393 NXPE2Q96DL1 559 aa22.52■■□□□ 1.2
CPNE1-202ENST00000352393 SFXN1Q9H9B4 322 aa22.52■■□□□ 1.2
CPNE1-202ENST00000352393 IER3IP1Q9Y5U9 82 aa22.52■■□□□ 1.2
CPNE1-202ENST00000352393 FANCMQ8IYD8 2048 aa22.52■■□□□ 1.2
CPNE1-202ENST00000352393 KHNYNO15037 678 aaKnown RBP22.52■■□□□ 1.2
CPNE1-202ENST00000352393 GPRIN2O60269 458 aa22.52■■□□□ 1.2
CPNE1-202ENST00000352393 MPC2O95563 127 aa22.52■■□□□ 1.2
CPNE1-202ENST00000352393 M6PRP20645 277 aa22.52■■□□□ 1.2
CPNE1-202ENST00000352393 ACTR1BP42025 376 aa22.52■■□□□ 1.2
CPNE1-202ENST00000352393 KIR2DL1P43626 348 aaPredicted RBP22.52■■□□□ 1.2
CPNE1-202ENST00000352393 DIO1P49895 249 aa22.52■■□□□ 1.2
CPNE1-202ENST00000352393 ZNF81P51508 661 aa22.52■■□□□ 1.2
CPNE1-202ENST00000352393 ACTR1AP61163 376 aa22.52■■□□□ 1.2
CPNE1-202ENST00000352393 OR11G2Q8NGC1 345 aa22.52■■□□□ 1.2
CPNE1-202ENST00000352393 OR52R1Q8NGF1 315 aa22.52■■□□□ 1.2
CPNE1-202ENST00000352393 ZNRF4Q8WWF5 429 aa22.52■■□□□ 1.2
CPNE1-202ENST00000352393 FAM3CQ92520 227 aa22.52■■□□□ 1.2
CPNE1-202ENST00000352393 RERGQ96A58 199 aaPredicted RBP22.52■■□□□ 1.2
CPNE1-202ENST00000352393 SLC25A38Q96DW6 304 aa22.52■■□□□ 1.2
CPNE1-202ENST00000352393 NOX4Q9NPH5 578 aa22.52■■□□□ 1.2
CPNE1-202ENST00000352393 A0A1B0GTQ1 180 aa22.51■■□□□ 1.19
CPNE1-202ENST00000352393 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.51■■□□□ 1.19
CPNE1-202ENST00000352393 PIN1P1O15428 100 aa22.51■■□□□ 1.19
CPNE1-202ENST00000352393 CCR9P51686 369 aa22.51■■□□□ 1.19
CPNE1-202ENST00000352393 SNTA1Q13424 505 aa22.51■■□□□ 1.19
CPNE1-202ENST00000352393 NFATC4Q14934 902 aa22.51■■□□□ 1.19
CPNE1-202ENST00000352393 ZC3H14Q6PJT7 736 aaKnown RBP22.51■■□□□ 1.19
CPNE1-202ENST00000352393 DGAT2L6Q6ZPD8 337 aa22.51■■□□□ 1.19
CPNE1-202ENST00000352393 RD3Q7Z3Z2 195 aa22.51■■□□□ 1.19
CPNE1-202ENST00000352393 BADQ92934 168 aa22.51■■□□□ 1.19
CPNE1-202ENST00000352393 ANKRD9Q96BM1 317 aaPredicted RBP22.51■■□□□ 1.19
CPNE1-202ENST00000352393 RADILQ96JH8 1075 aa22.51■■□□□ 1.19
CPNE1-202ENST00000352393 DPCDQ9BVM2 203 aaPredicted RBP22.51■■□□□ 1.19
CPNE1-202ENST00000352393 ZNF436Q9C0F3 470 aaPredicted RBP22.51■■□□□ 1.19
CPNE1-202ENST00000352393 EVA1BQ9NVM1 165 aa22.51■■□□□ 1.19
CPNE1-202ENST00000352393 RCE1Q9Y256 329 aa22.51■■□□□ 1.19
CPNE1-202ENST00000352393 DOCK8Q8NF50 2099 aa22.51■■□□□ 1.19
CPNE1-202ENST00000352393 CHD9Q3L8U1 2897 aa22.51■■□□□ 1.19
CPNE1-202ENST00000352393 OR6C74A6NCV1 312 aa22.51■■□□□ 1.19
CPNE1-202ENST00000352393 GMDSO60547 372 aa22.51■■□□□ 1.19
CPNE1-202ENST00000352393 IGKV1D-16P01601 117 aa22.51■■□□□ 1.19
CPNE1-202ENST00000352393 GUSBP08236 651 aa22.51■■□□□ 1.19
CPNE1-202ENST00000352393 PSMB10P40306 273 aa22.51■■□□□ 1.19
CPNE1-202ENST00000352393 EXOSC2Q13868 293 aaKnown RBP22.51■■□□□ 1.19
CPNE1-202ENST00000352393 FGFBP1Q14512 234 aa22.51■■□□□ 1.19
CPNE1-202ENST00000352393 KIRREL2Q6UWL6 708 aa22.51■■□□□ 1.19
CPNE1-202ENST00000352393 LINGO2Q7L985 606 aa22.51■■□□□ 1.19
CPNE1-202ENST00000352393 YAF2Q8IY57 180 aa22.51■■□□□ 1.19
CPNE1-202ENST00000352393 BEX1Q9HBH7 125 aa22.51■■□□□ 1.19
CPNE1-202ENST00000352393 HRASLSQ9HDD0 168 aa22.51■■□□□ 1.19
CPNE1-202ENST00000352393 RPS6KB2Q9UBS0 482 aa22.51■■□□□ 1.19
CPNE1-202ENST00000352393 SELENOFO60613 162 aa22.5■■□□□ 1.19
CPNE1-202ENST00000352393 GALR3O60755 368 aaPredicted RBP22.5■■□□□ 1.19
CPNE1-202ENST00000352393 TGM6O95932 706 aa22.5■■□□□ 1.19
CPNE1-202ENST00000352393 MYOGP15173 224 aa22.5■■□□□ 1.19
CPNE1-202ENST00000352393 SRMP19623 302 aa22.5■■□□□ 1.19
CPNE1-202ENST00000352393 EPHA4P54764 986 aa22.5■■□□□ 1.19
CPNE1-202ENST00000352393 PSG6Q00889 435 aa22.5■■□□□ 1.19
CPNE1-202ENST00000352393 LGALS3BPQ08380 585 aa22.5■■□□□ 1.19
CPNE1-202ENST00000352393 PON3Q15166 354 aa22.5■■□□□ 1.19
CPNE1-202ENST00000352393 TMEM255AQ5JRV8 349 aa22.5■■□□□ 1.19
CPNE1-202ENST00000352393 LMF2Q9BU23 707 aaKnown RBP22.5■■□□□ 1.19
CPNE1-202ENST00000352393 SPRTNQ9H040 489 aaPredicted RBP22.5■■□□□ 1.19
CPNE1-202ENST00000352393 CAPN10Q9HC96 672 aa22.5■■□□□ 1.19
CPNE1-202ENST00000352393 NANSQ9NR45 359 aa22.5■■□□□ 1.19
CPNE1-202ENST00000352393 CA5BQ9Y2D0 317 aa22.5■■□□□ 1.19
CPNE1-202ENST00000352393 ADAM18Q9Y3Q7 739 aa22.5■■□□□ 1.19
CPNE1-202ENST00000352393 AIPO00170 330 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms