RNA–Protein interactions for RNA: ENST00000349004.5

NDRG3-201, Transcript of NDRG family member 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NDRG3, Length 2,964 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG3-201ENST00000349004 BRIX1Q8TDN6 353 aaKnown RBP5.28□□□□□ -1.56
NDRG3-201ENST00000349004 ART5Q96L15 291 aa5.28□□□□□ -1.56
NDRG3-201ENST00000349004 AGAP4Q96P64 663 aa5.28□□□□□ -1.56
NDRG3-201ENST00000349004 TMED9Q9BVK6 235 aa5.28□□□□□ -1.56
NDRG3-201ENST00000349004 HDHD5Q9BXW7 423 aa5.28□□□□□ -1.56
NDRG3-201ENST00000349004 SRRQ9GZT4 340 aa5.28□□□□□ -1.56
NDRG3-201ENST00000349004 ENKD1Q9H0I2 346 aa5.28□□□□□ -1.56
NDRG3-201ENST00000349004 MED20Q9H944 212 aa5.28□□□□□ -1.56
NDRG3-201ENST00000349004 RANGRFQ9HD47 186 aaPredicted RBP5.28□□□□□ -1.56
NDRG3-201ENST00000349004 NUFIP1Q9UHK0 495 aaKnown RBP5.28□□□□□ -1.56
NDRG3-201ENST00000349004 CFL2Q9Y281 166 aa5.28□□□□□ -1.56
NDRG3-201ENST00000349004 PEX16Q9Y5Y5 336 aa5.28□□□□□ -1.56
NDRG3-201ENST00000349004 SHANK1Q9Y566 2161 aa5.28□□□□□ -1.56
NDRG3-201ENST00000349004 A0A1W2PR48 441 aa5.28□□□□□ -1.56
NDRG3-201ENST00000349004 SAGE2PA6NJ88 616 aa5.28□□□□□ -1.56
NDRG3-201ENST00000349004 ZNF670-ZNF695F2Z2N8 137 aa5.28□□□□□ -1.56
NDRG3-201ENST00000349004 J3QKU1 62 aa5.28□□□□□ -1.56
NDRG3-201ENST00000349004 PEX12O00623 359 aa5.28□□□□□ -1.56
NDRG3-201ENST00000349004 ERI3O43414 337 aaKnown RBP5.28□□□□□ -1.56
NDRG3-201ENST00000349004 LDB3O75112 727 aa5.28□□□□□ -1.56
NDRG3-201ENST00000349004 SLITRK5O94991 958 aa5.28□□□□□ -1.56
NDRG3-201ENST00000349004 HEXBP07686 556 aa5.28□□□□□ -1.56
NDRG3-201ENST00000349004 UBL4AP11441 157 aa5.28□□□□□ -1.56
NDRG3-201ENST00000349004 HOXB6P17509 224 aaKnown RBP5.28□□□□□ -1.56
NDRG3-201ENST00000349004 APEX1P27695 318 aaKnown RBP5.28□□□□□ -1.56
NDRG3-201ENST00000349004 CD82P27701 267 aa5.28□□□□□ -1.56
NDRG3-201ENST00000349004 ETV6P41212 452 aa5.28□□□□□ -1.56
NDRG3-201ENST00000349004 MC3RP41968 323 aa5.28□□□□□ -1.56
NDRG3-201ENST00000349004 GIPRP48546 466 aa5.28□□□□□ -1.56
NDRG3-201ENST00000349004 RAB25P57735 213 aa5.28□□□□□ -1.56
NDRG3-201ENST00000349004 STXBP1P61764 594 aaKnown RBP5.28□□□□□ -1.56
NDRG3-201ENST00000349004 CHRNEQ04844 493 aa5.28□□□□□ -1.56
NDRG3-201ENST00000349004 NSDHLQ15738 373 aa5.28□□□□□ -1.56
NDRG3-201ENST00000349004 SNAPC1Q16533 368 aa5.28□□□□□ -1.56
NDRG3-201ENST00000349004 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.28□□□□□ -1.56
NDRG3-201ENST00000349004 BTBD16Q32M84 506 aa5.28□□□□□ -1.56
NDRG3-201ENST00000349004 FAM27D1Q5T7N8 215 aa5.28□□□□□ -1.56
NDRG3-201ENST00000349004 FAM131AQ6UXB0 335 aa5.28□□□□□ -1.56
NDRG3-201ENST00000349004 IL20RBQ6UXL0 311 aa5.28□□□□□ -1.56
NDRG3-201ENST00000349004 ZNF517Q6ZMY9 492 aaPredicted RBP5.28□□□□□ -1.56
NDRG3-201ENST00000349004 VASH1Q7L8A9 365 aaPredicted RBP5.28□□□□□ -1.56
NDRG3-201ENST00000349004 KMT5CQ86Y97 462 aa5.28□□□□□ -1.56
NDRG3-201ENST00000349004 UBQLNLQ8IYU4 475 aa5.28□□□□□ -1.56
NDRG3-201ENST00000349004 TBC1D19Q8N5T2 526 aa5.28□□□□□ -1.56
NDRG3-201ENST00000349004 ATP6V1C2Q8NEY4 427 aa5.28□□□□□ -1.56
NDRG3-201ENST00000349004 OR11G2Q8NGC1 345 aa5.28□□□□□ -1.56
NDRG3-201ENST00000349004 OR9A2Q8NGT5 310 aa5.28□□□□□ -1.56
NDRG3-201ENST00000349004 OR2Y1Q8NGV0 311 aa5.28□□□□□ -1.56
NDRG3-201ENST00000349004 OR51Q1Q8NH59 317 aa5.28□□□□□ -1.56
NDRG3-201ENST00000349004 OTULINQ96BN8 352 aa5.28□□□□□ -1.56
NDRG3-201ENST00000349004 SENP5Q96HI0 755 aaPredicted RBP5.28□□□□□ -1.56
NDRG3-201ENST00000349004 METTL2AQ96IZ6 378 aaKnown RBP5.28□□□□□ -1.56
NDRG3-201ENST00000349004 KATNB1Q9BVA0 655 aa5.28□□□□□ -1.56
NDRG3-201ENST00000349004 TTTY10Q9BZA0 68 aa5.28□□□□□ -1.56
NDRG3-201ENST00000349004 DDX28Q9NUL7 540 aaKnown RBP5.28□□□□□ -1.56
NDRG3-201ENST00000349004 ASF1BQ9NVP2 202 aa5.28□□□□□ -1.56
NDRG3-201ENST00000349004 CNOT2Q9NZN8 540 aaKnown RBP5.28□□□□□ -1.56
NDRG3-201ENST00000349004 COMMD3Q9UBI1 195 aa5.28□□□□□ -1.56
NDRG3-201ENST00000349004 TESQ9UGI8 421 aaKnown RBP5.28□□□□□ -1.56
NDRG3-201ENST00000349004 LAMP5Q9UJQ1 280 aa5.28□□□□□ -1.56
NDRG3-201ENST00000349004 MYO9AB2RTY4 2548 aa5.27□□□□□ -1.57
NDRG3-201ENST00000349004 DOPEY1Q5JWR5 2465 aa5.27□□□□□ -1.57
NDRG3-201ENST00000349004 SH3D21A4FU49 640 aa5.27□□□□□ -1.57
NDRG3-201ENST00000349004 LRIT2A6NDA9 550 aa5.27□□□□□ -1.57
NDRG3-201ENST00000349004 CDC42EP2O14613 210 aa5.27□□□□□ -1.57
NDRG3-201ENST00000349004 MYL12BO14950 172 aa5.27□□□□□ -1.57
NDRG3-201ENST00000349004 PLA2G10O15496 165 aa5.27□□□□□ -1.57
NDRG3-201ENST00000349004 SSR2P43308 183 aa5.27□□□□□ -1.57
NDRG3-201ENST00000349004 EMP2P54851 167 aa5.27□□□□□ -1.57
NDRG3-201ENST00000349004 GPR85P60893 370 aa5.27□□□□□ -1.57
NDRG3-201ENST00000349004 SNRPGP62308 76 aaKnown RBP5.27□□□□□ -1.57
NDRG3-201ENST00000349004 CD83Q01151 205 aa5.27□□□□□ -1.57
NDRG3-201ENST00000349004 TBRG1Q3YBR2 411 aa5.27□□□□□ -1.57
NDRG3-201ENST00000349004 GLYR1Q49A26 553 aaPredicted RBP5.27□□□□□ -1.57
NDRG3-201ENST00000349004 GPAT3Q53EU6 434 aa5.27□□□□□ -1.57
NDRG3-201ENST00000349004 TOR1AIP1Q5JTV8 583 aa5.27□□□□□ -1.57
NDRG3-201ENST00000349004 CCNJQ5T5M9 372 aa5.27□□□□□ -1.57
NDRG3-201ENST00000349004 SLC6A19Q695T7 634 aa5.27□□□□□ -1.57
NDRG3-201ENST00000349004 VASNQ6EMK4 673 aa5.27□□□□□ -1.57
NDRG3-201ENST00000349004 ZNF425Q6IV72 752 aa5.27□□□□□ -1.57
NDRG3-201ENST00000349004 TUBA3EQ6PEY2 450 aa5.27□□□□□ -1.57
NDRG3-201ENST00000349004 LCTLQ6UWM7 567 aa5.27□□□□□ -1.57
NDRG3-201ENST00000349004 TMPRSS11AQ6ZMR5 421 aa5.27□□□□□ -1.57
NDRG3-201ENST00000349004 OR4Q3Q8NH05 313 aa5.27□□□□□ -1.57
NDRG3-201ENST00000349004 CREB3L4Q8TEY5 395 aa5.27□□□□□ -1.57
NDRG3-201ENST00000349004 TMEM255BQ8WV15 326 aa5.27□□□□□ -1.57
NDRG3-201ENST00000349004 OR5P2Q8WZ92 322 aa5.27□□□□□ -1.57
NDRG3-201ENST00000349004 SLC25A46Q96AG3 418 aa5.27□□□□□ -1.57
NDRG3-201ENST00000349004 C1GALT1C1Q96EU7 318 aa5.27□□□□□ -1.57
NDRG3-201ENST00000349004 RNFT2Q96EX2 444 aa5.27□□□□□ -1.57
NDRG3-201ENST00000349004 TBX5Q99593 518 aa5.27□□□□□ -1.57
NDRG3-201ENST00000349004 VN1R1Q9GZP7 353 aa5.27□□□□□ -1.57
NDRG3-201ENST00000349004 PPIL3Q9H2H8 161 aaKnown RBP5.27□□□□□ -1.57
NDRG3-201ENST00000349004 ISG20L2Q9H9L3 353 aaKnown RBP5.27□□□□□ -1.57
NDRG3-201ENST00000349004 PNO1Q9NRX1 252 aaKnown RBP5.27□□□□□ -1.57
NDRG3-201ENST00000349004 SEMA5BQ9P283 1151 aa5.27□□□□□ -1.57
NDRG3-201ENST00000349004 MKLN1Q9UL63 735 aa5.27□□□□□ -1.57
NDRG3-201ENST00000349004 STUB1Q9UNE7 303 aa5.27□□□□□ -1.57
NDRG3-201ENST00000349004 MTORP42345 2549 aa5.27□□□□□ -1.57
NDRG3-201ENST00000349004 A0A0A6YYD5 115 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms