RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 NRG3P56975 720 aa12.23□□□□□ -0.45
CASC4-202ENST00000345795 SPTBN1Q01082 2364 aaKnown RBP12.23□□□□□ -0.45
CASC4-202ENST00000345795 C9orf135Q5VTT2 229 aa12.23□□□□□ -0.45
CASC4-202ENST00000345795 ZNF550Q7Z398 422 aa12.23□□□□□ -0.45
CASC4-202ENST00000345795 KRT77Q7Z794 578 aa12.23□□□□□ -0.45
CASC4-202ENST00000345795 OR1F2PQ96R84 312 aa12.23□□□□□ -0.45
CASC4-202ENST00000345795 G6PC3Q9BUM1 346 aa12.23□□□□□ -0.45
CASC4-202ENST00000345795 TRPV4Q9HBA0 871 aa12.23□□□□□ -0.45
CASC4-202ENST00000345795 GPN3Q9UHW5 284 aaPredicted RBP12.23□□□□□ -0.45
CASC4-202ENST00000345795 EXOSC1Q9Y3B2 195 aaKnown RBP12.23□□□□□ -0.45
CASC4-202ENST00000345795 FAM25EA8MYX2 175 aa12.23□□□□□ -0.45
CASC4-202ENST00000345795 H0YIG0 161 aa12.23□□□□□ -0.45
CASC4-202ENST00000345795 ZNF701M0R085 212 aaPredicted RBP12.23□□□□□ -0.45
CASC4-202ENST00000345795 IGKV1D-16P01601 117 aa12.23□□□□□ -0.45
CASC4-202ENST00000345795 HOXB9P17482 250 aaPredicted RBP12.23□□□□□ -0.45
CASC4-202ENST00000345795 PRKAR1BP31321 381 aa12.23□□□□□ -0.45
CASC4-202ENST00000345795 DOC2BQ14184 412 aa12.23□□□□□ -0.45
CASC4-202ENST00000345795 ELOAQ14241 798 aaKnown RBP12.23□□□□□ -0.45
CASC4-202ENST00000345795 BCL2L15Q5TBC7 163 aa12.23□□□□□ -0.45
CASC4-202ENST00000345795 VASNQ6EMK4 673 aa12.23□□□□□ -0.45
CASC4-202ENST00000345795 TCEAL6Q6IPX3 200 aa12.23□□□□□ -0.45
CASC4-202ENST00000345795 RASSF6Q6ZTQ3 369 aa12.23□□□□□ -0.45
CASC4-202ENST00000345795 PM20D2Q8IYS1 436 aa12.23□□□□□ -0.45
CASC4-202ENST00000345795 NANOGP1Q8N7R0 232 aa12.23□□□□□ -0.45
CASC4-202ENST00000345795 OR6C4Q8NGE1 309 aa12.23□□□□□ -0.45
CASC4-202ENST00000345795 TRMT10AQ8TBZ6 339 aaKnown RBP12.23□□□□□ -0.45
CASC4-202ENST00000345795 ZPLD1Q8TCW7 415 aa12.23□□□□□ -0.45
CASC4-202ENST00000345795 TCEAL3Q969E4 200 aa12.23□□□□□ -0.45
CASC4-202ENST00000345795 C19orf43Q9BQ61 176 aa12.23□□□□□ -0.45
CASC4-202ENST00000345795 CES1P1Q9UKY3 287 aa12.23□□□□□ -0.45
CASC4-202ENST00000345795 A0A0G2JMP0 313 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 TRBV11-1A0A0K0K1C0 115 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 A0A0X1KG70 313 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 SAGE2PA6NJ88 616 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 SOBPA7XYQ1 873 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 FMO6PO60774 539 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 ADAM11O75078 769 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 SCRG1O75711 98 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 AHSA1O95433 338 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 TBXA2RP21731 343 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 AFF3P51826 1226 aaKnown RBP12.22□□□□□ -0.45
CASC4-202ENST00000345795 RACK1P63244 317 aaKnown RBP12.22□□□□□ -0.45
CASC4-202ENST00000345795 INPP5JQ15735 1006 aaPredicted RBP12.22□□□□□ -0.45
CASC4-202ENST00000345795 MRM1Q6IN84 353 aaKnown RBP12.22□□□□□ -0.45
CASC4-202ENST00000345795 QSOX2Q6ZRP7 698 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 MEPCEQ7L2J0 689 aaKnown RBP12.22□□□□□ -0.45
CASC4-202ENST00000345795 GALNTL5Q7Z4T8 443 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 OR10H5Q8NGA6 315 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 OR4M2Q8NGB6 313 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 SFXN5Q8TD22 340 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 TCTN2Q96GX1 697 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 MOGAT1Q96PD6 335 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 WDR77Q9BQA1 342 aaPredicted RBP12.22□□□□□ -0.45
CASC4-202ENST00000345795 ORAI3Q9BRQ5 295 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 SLITRK2Q9H156 845 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 SP140LQ9H930 580 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 PAQR5Q9NXK6 330 aaPredicted RBP12.22□□□□□ -0.45
CASC4-202ENST00000345795 BABAM2Q9NXR7 383 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 ADAM30Q9UKF2 790 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 POMT2Q9UKY4 750 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 COLQQ9Y215 455 aaPredicted RBP12.22□□□□□ -0.45
CASC4-202ENST00000345795 PLXNA4Q9HCM2 1894 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 FRMPD3Q5JV73 1810 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 GIMD1P0DJR0 217 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 GDI2P50395 445 aaKnown RBP12.22□□□□□ -0.45
CASC4-202ENST00000345795 RAB40BQ12829 278 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 PRICKLE4Q2TBC4 344 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 NXNL2Q5VZ03 156 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 TMEM225Q6GV28 225 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 ULK3Q6PHR2 472 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 THAP4Q8WY91 577 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 DAZLQ92904 295 aaKnown RBP12.22□□□□□ -0.45
CASC4-202ENST00000345795 DEFB126Q9BYW3 111 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 MED29Q9NX70 200 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 HELZP42694 1942 aaKnown RBP12.22□□□□□ -0.45
CASC4-202ENST00000345795 SLC22A31A6NKX4 558 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 TNFRSF10CO14798 259 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 KCNJ13O60928 360 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 CTNSO60931 367 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 LIMS3P0CW19 117 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 LIMS4P0CW20 117 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 ZNF823P16415 610 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 OMPP47874 163 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 SRYQ05066 204 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 CHAF1BQ13112 559 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 WDR45BQ5MNZ6 344 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 IRAK1BP1Q5VVH5 260 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 Q6ZNX1 250 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 MORN4Q8NDC4 146 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 SPACA5Q96QH8 159 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 CNN2Q99439 309 aaKnown RBP12.22□□□□□ -0.45
CASC4-202ENST00000345795 SIAEQ9HAT2 523 aa12.22□□□□□ -0.45
CASC4-202ENST00000345795 MEPEQ9NQ76 525 aaPredicted RBP12.22□□□□□ -0.45
CASC4-202ENST00000345795 A0A1W2PNR3 127 aa12.21□□□□□ -0.45
CASC4-202ENST00000345795 LAMTOR5O43504 91 aa12.21□□□□□ -0.45
CASC4-202ENST00000345795 SYPP08247 313 aa12.21□□□□□ -0.45
CASC4-202ENST00000345795 PSMD4P55036 377 aaKnown RBP12.21□□□□□ -0.45
CASC4-202ENST00000345795 POU3F1Q03052 451 aaPredicted RBP12.21□□□□□ -0.45
CASC4-202ENST00000345795 ARHGAP11BQ3KRB8 267 aa12.21□□□□□ -0.45
CASC4-202ENST00000345795 C14orf28Q4W4Y0 310 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms