RNA–Protein interactions for RNA: ENST00000343916.7

COL9A3-201, Transcript of collagen type IX alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-201ENST00000343916 METAP1DQ6UB28 335 aaPredicted RBP17.73■□□□□ 0.43
COL9A3-201ENST00000343916 CHRDL2Q6WN34 429 aa17.73■□□□□ 0.43
COL9A3-201ENST00000343916 UBASH3BQ8TF42 649 aa17.73■□□□□ 0.43
COL9A3-201ENST00000343916 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.73■□□□□ 0.43
COL9A3-201ENST00000343916 ZNF285Q96NJ3 590 aa17.73■□□□□ 0.43
COL9A3-201ENST00000343916 ALPK2Q86TB3 2170 aa17.72■□□□□ 0.43
COL9A3-201ENST00000343916 SC5DO75845 299 aa17.72■□□□□ 0.43
COL9A3-201ENST00000343916 HLA-DQB1P01920 261 aa17.72■□□□□ 0.43
COL9A3-201ENST00000343916 EIF4EP06730 217 aaKnown RBP17.72■□□□□ 0.43
COL9A3-201ENST00000343916 ERVK-25P63136 954 aa17.72■□□□□ 0.43
COL9A3-201ENST00000343916 CD83Q01151 205 aa17.72■□□□□ 0.43
COL9A3-201ENST00000343916 TTLL10Q6ZVT0 673 aa17.72■□□□□ 0.43
COL9A3-201ENST00000343916 SAMD12Q8N8I0 201 aa17.72■□□□□ 0.43
COL9A3-201ENST00000343916 ZNF524Q96C55 264 aa17.72■□□□□ 0.43
COL9A3-201ENST00000343916 FRMD6Q96NE9 622 aa17.72■□□□□ 0.43
COL9A3-201ENST00000343916 KLHDC3Q9BQ90 382 aa17.72■□□□□ 0.43
COL9A3-201ENST00000343916 TMEM43Q9BTV4 400 aa17.72■□□□□ 0.43
COL9A3-201ENST00000343916 PDE7BQ9NP56 450 aa17.72■□□□□ 0.43
COL9A3-201ENST00000343916 ENAMQ9NRM1 1142 aa17.72■□□□□ 0.43
COL9A3-201ENST00000343916 A0A1W2PR77 199 aa17.72■□□□□ 0.43
COL9A3-201ENST00000343916 OR6C68A6NDL8 312 aa17.72■□□□□ 0.43
COL9A3-201ENST00000343916 CENPBD1B2RD01 187 aa17.72■□□□□ 0.43
COL9A3-201ENST00000343916 GMFGO60234 142 aa17.72■□□□□ 0.43
COL9A3-201ENST00000343916 SELENOFO60613 162 aa17.72■□□□□ 0.43
COL9A3-201ENST00000343916 PSMD4P55036 377 aaKnown RBP17.72■□□□□ 0.43
COL9A3-201ENST00000343916 TAS2R43P59537 309 aa17.72■□□□□ 0.43
COL9A3-201ENST00000343916 ACTC1P68032 377 aa17.72■□□□□ 0.43
COL9A3-201ENST00000343916 ACTA1P68133 377 aa17.72■□□□□ 0.43
COL9A3-201ENST00000343916 COL19A1Q14993 1142 aa17.72■□□□□ 0.43
COL9A3-201ENST00000343916 KLHL26Q53HC5 615 aa17.72■□□□□ 0.43
COL9A3-201ENST00000343916 Q5BKY6 102 aa17.72■□□□□ 0.43
COL9A3-201ENST00000343916 CMIPQ8IY22 773 aa17.72■□□□□ 0.43
COL9A3-201ENST00000343916 OR6K6Q8NGW6 343 aa17.72■□□□□ 0.43
COL9A3-201ENST00000343916 SLC2A12Q8TD20 617 aa17.72■□□□□ 0.43
COL9A3-201ENST00000343916 PTPMT1Q8WUK0 201 aaPredicted RBP17.72■□□□□ 0.43
COL9A3-201ENST00000343916 SLC7A6Q92536 515 aa17.72■□□□□ 0.43
COL9A3-201ENST00000343916 PELI1Q96FA3 418 aa17.72■□□□□ 0.43
COL9A3-201ENST00000343916 PRO3102Q9H379 93 aa17.72■□□□□ 0.43
COL9A3-201ENST00000343916 NLKQ9UBE8 527 aa17.72■□□□□ 0.43
COL9A3-201ENST00000343916 ST6GALNAC2Q9UJ37 374 aa17.72■□□□□ 0.43
COL9A3-201ENST00000343916 ICAM5Q9UMF0 924 aa17.72■□□□□ 0.43
COL9A3-201ENST00000343916 IGKV1D-42A0A075B6H8 117 aa17.71■□□□□ 0.43
COL9A3-201ENST00000343916 LILRA5A6NI73 299 aa17.71■□□□□ 0.43
COL9A3-201ENST00000343916 FAM171A2A8MVW0 826 aa17.71■□□□□ 0.43
COL9A3-201ENST00000343916 BLOC1S5-TXNDC5H3BN57 136 aa17.71■□□□□ 0.43
COL9A3-201ENST00000343916 SLC19A2O60779 497 aa17.71■□□□□ 0.43
COL9A3-201ENST00000343916 CD27P26842 260 aa17.71■□□□□ 0.43
COL9A3-201ENST00000343916 RPS5P46782 204 aaKnown RBP17.71■□□□□ 0.43
COL9A3-201ENST00000343916 POU4F2Q12837 409 aa17.71■□□□□ 0.43
COL9A3-201ENST00000343916 CCDC85BQ15834 202 aaPredicted RBP17.71■□□□□ 0.43
COL9A3-201ENST00000343916 APOOLQ6UXV4 268 aa17.71■□□□□ 0.43
COL9A3-201ENST00000343916 NPEPL1Q8NDH3 523 aa17.71■□□□□ 0.43
COL9A3-201ENST00000343916 MOSPD2Q8NHP6 518 aa17.71■□□□□ 0.43
COL9A3-201ENST00000343916 PHOSPHO1Q8TCT1 267 aa17.71■□□□□ 0.43
COL9A3-201ENST00000343916 RNF170Q96K19 258 aa17.71■□□□□ 0.43
COL9A3-201ENST00000343916 CNN2Q99439 309 aaKnown RBP17.71■□□□□ 0.43
COL9A3-201ENST00000343916 WACQ9BTA9 647 aa17.71■□□□□ 0.43
COL9A3-201ENST00000343916 OR8D2Q9GZM6 311 aa17.71■□□□□ 0.43
COL9A3-201ENST00000343916 UCKL1Q9NWZ5 548 aa17.71■□□□□ 0.43
COL9A3-201ENST00000343916 ADAM30Q9UKF2 790 aa17.71■□□□□ 0.43
COL9A3-201ENST00000343916 PCDHGB7Q9Y5F8 929 aa17.71■□□□□ 0.43
COL9A3-201ENST00000343916 A0A0G2JK05 382 aa17.71■□□□□ 0.42
COL9A3-201ENST00000343916 PSMD9O00233 223 aa17.71■□□□□ 0.42
COL9A3-201ENST00000343916 LYRM1O43325 122 aa17.71■□□□□ 0.42
COL9A3-201ENST00000343916 ZNF217O75362 1048 aa17.71■□□□□ 0.42
COL9A3-201ENST00000343916 HPGDP15428 266 aa17.71■□□□□ 0.42
COL9A3-201ENST00000343916 GRPRP30550 384 aa17.71■□□□□ 0.42
COL9A3-201ENST00000343916 QPRTQ15274 297 aa17.71■□□□□ 0.42
COL9A3-201ENST00000343916 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.71■□□□□ 0.42
COL9A3-201ENST00000343916 PLET1Q6UQ28 207 aa17.71■□□□□ 0.42
COL9A3-201ENST00000343916 PXKQ7Z7A4 578 aa17.71■□□□□ 0.42
COL9A3-201ENST00000343916 OR4M1Q8NGD0 313 aa17.71■□□□□ 0.42
COL9A3-201ENST00000343916 ADAMTS18Q8TE60 1221 aa17.71■□□□□ 0.42
COL9A3-201ENST00000343916 ACOT12Q8WYK0 555 aa17.71■□□□□ 0.42
COL9A3-201ENST00000343916 TSLPQ969D9 159 aa17.71■□□□□ 0.42
COL9A3-201ENST00000343916 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.71■□□□□ 0.42
COL9A3-201ENST00000343916 NXF5Q9H1B4 397 aaKnown RBP17.71■□□□□ 0.42
COL9A3-201ENST00000343916 RBFOX1Q9NWB1 397 aaKnown RBP17.71■□□□□ 0.42
COL9A3-201ENST00000343916 DHCR7Q9UBM7 475 aaKnown RBP17.71■□□□□ 0.42
COL9A3-201ENST00000343916 ZNF346Q9UL40 294 aaKnown RBP17.71■□□□□ 0.42
COL9A3-201ENST00000343916 CLEC4AQ9UMR7 237 aa17.71■□□□□ 0.42
COL9A3-201ENST00000343916 COPS3Q9UNS2 423 aa17.71■□□□□ 0.42
COL9A3-201ENST00000343916 BLACEA4D250 179 aa17.7■□□□□ 0.42
COL9A3-201ENST00000343916 TLCD2A6NGC4 264 aa17.7■□□□□ 0.42
COL9A3-201ENST00000343916 SRFP11831 508 aa17.7■□□□□ 0.42
COL9A3-201ENST00000343916 NUDT1P36639 197 aa17.7■□□□□ 0.42
COL9A3-201ENST00000343916 NOXA1Q86UR1 476 aa17.7■□□□□ 0.42
COL9A3-201ENST00000343916 SLC35F2Q8IXU6 374 aa17.7■□□□□ 0.42
COL9A3-201ENST00000343916 PRR22Q8IZ63 422 aa17.7■□□□□ 0.42
COL9A3-201ENST00000343916 KCNJ15Q99712 375 aa17.7■□□□□ 0.42
COL9A3-201ENST00000343916 LANCL2Q9NS86 450 aa17.7■□□□□ 0.42
COL9A3-201ENST00000343916 GNG8Q9UK08 70 aa17.7■□□□□ 0.42
COL9A3-201ENST00000343916 ZNF337Q9Y3M9 751 aa17.7■□□□□ 0.42
COL9A3-201ENST00000343916 RP1P56715 2156 aa17.7■□□□□ 0.42
COL9A3-201ENST00000343916 UNC13CQ8NB66 2214 aa17.7■□□□□ 0.42
COL9A3-201ENST00000343916 METTL12A8MUP2 240 aa17.7■□□□□ 0.42
COL9A3-201ENST00000343916 LANCL1O43813 399 aa17.7■□□□□ 0.42
COL9A3-201ENST00000343916 TFPIP10646 304 aa17.7■□□□□ 0.42
COL9A3-201ENST00000343916 PRKCAP17252 672 aa17.7■□□□□ 0.42
COL9A3-201ENST00000343916 INPP1P49441 399 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms