RNA–Protein interactions for RNA: ENST00000341423.9

HMGB1-203, Transcript of high mobility group box 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB1, Length 5,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-203ENST00000341423 SLC18B1Q6NT16 456 aa7.72□□□□□ -1.17
HMGB1-203ENST00000341423 GABRG1Q8N1C3 465 aa7.72□□□□□ -1.17
HMGB1-203ENST00000341423 OR4F6Q8NGB9 312 aa7.72□□□□□ -1.17
HMGB1-203ENST00000341423 NAT14Q8WUY8 206 aa7.72□□□□□ -1.17
HMGB1-203ENST00000341423 ZNF480Q8WV37 535 aa7.72□□□□□ -1.17
HMGB1-203ENST00000341423 HDHD2Q9H0R4 259 aa7.72□□□□□ -1.17
HMGB1-203ENST00000341423 OR51I1Q9H343 314 aa7.72□□□□□ -1.17
HMGB1-203ENST00000341423 NTMQ9P121 344 aa7.72□□□□□ -1.17
HMGB1-203ENST00000341423 TMEM59LQ9UK28 342 aa7.72□□□□□ -1.17
HMGB1-203ENST00000341423 PRELID3BQ9Y3B1 194 aa7.72□□□□□ -1.17
HMGB1-203ENST00000341423 A0A1W2PQF6 199 aa7.71□□□□□ -1.17
HMGB1-203ENST00000341423 A6NHS1 94 aa7.71□□□□□ -1.17
HMGB1-203ENST00000341423 HLA-HP01893 362 aa7.71□□□□□ -1.17
HMGB1-203ENST00000341423 FAUP35544 74 aaKnown RBP7.71□□□□□ -1.17
HMGB1-203ENST00000341423 ALDH3A2P51648 485 aa7.71□□□□□ -1.17
HMGB1-203ENST00000341423 GFRA1P56159 465 aa7.71□□□□□ -1.17
HMGB1-203ENST00000341423 MZT2AQ6P582 158 aa7.71□□□□□ -1.17
HMGB1-203ENST00000341423 Q6ZNB5 142 aa7.71□□□□□ -1.17
HMGB1-203ENST00000341423 OR5AS1Q8N127 324 aa7.71□□□□□ -1.17
HMGB1-203ENST00000341423 IL25Q9H293 177 aa7.71□□□□□ -1.17
HMGB1-203ENST00000341423 MAGEL2Q9UJ55 1249 aa7.71□□□□□ -1.17
HMGB1-203ENST00000341423 A0A096LPE4 126 aa7.71□□□□□ -1.18
HMGB1-203ENST00000341423 A0A1W2PPZ6 126 aa7.71□□□□□ -1.18
HMGB1-203ENST00000341423 K7ESF4 209 aa7.71□□□□□ -1.18
HMGB1-203ENST00000341423 L7N2F9 121 aa7.71□□□□□ -1.18
HMGB1-203ENST00000341423 PHYHO14832 338 aa7.71□□□□□ -1.18
HMGB1-203ENST00000341423 H1F0P07305 194 aaKnown RBP7.71□□□□□ -1.18
HMGB1-203ENST00000341423 BGNP21810 368 aa7.71□□□□□ -1.18
HMGB1-203ENST00000341423 VAMP2P63027 116 aa7.71□□□□□ -1.18
HMGB1-203ENST00000341423 PCOLCEQ15113 449 aa7.71□□□□□ -1.18
HMGB1-203ENST00000341423 ADAM5Q6NVV9 412 aa7.71□□□□□ -1.18
HMGB1-203ENST00000341423 FAM57AQ8TBR7 257 aa7.71□□□□□ -1.18
HMGB1-203ENST00000341423 HAVCR1Q96D42 359 aa7.71□□□□□ -1.18
HMGB1-203ENST00000341423 ASB9Q96DX5 294 aa7.71□□□□□ -1.18
HMGB1-203ENST00000341423 OR5M11Q96RB7 305 aa7.71□□□□□ -1.18
HMGB1-203ENST00000341423 UCK1Q9HA47 277 aa7.71□□□□□ -1.18
HMGB1-203ENST00000341423 ABCB9Q9NP78 766 aa7.71□□□□□ -1.18
HMGB1-203ENST00000341423 CNTN6Q9UQ52 1028 aa7.71□□□□□ -1.18
HMGB1-203ENST00000341423 TMED7-TICAM2A0A0A6YYA0 188 aa7.71□□□□□ -1.18
HMGB1-203ENST00000341423 SEMA7AO75326 666 aa7.71□□□□□ -1.18
HMGB1-203ENST00000341423 CRHP06850 196 aa7.71□□□□□ -1.18
HMGB1-203ENST00000341423 PMP22Q01453 160 aa7.71□□□□□ -1.18
HMGB1-203ENST00000341423 DYRK1AQ13627 763 aa7.71□□□□□ -1.18
HMGB1-203ENST00000341423 TIGD3Q6B0B8 471 aa7.71□□□□□ -1.18
HMGB1-203ENST00000341423 ARSGQ96EG1 525 aa7.71□□□□□ -1.18
HMGB1-203ENST00000341423 MRGPRX2Q96LB1 330 aa7.71□□□□□ -1.18
HMGB1-203ENST00000341423 PPM1MQ96MI6 270 aa7.71□□□□□ -1.18
HMGB1-203ENST00000341423 POLR2J3Q9H1A7 115 aaKnown RBP7.71□□□□□ -1.18
HMGB1-203ENST00000341423 HINT3Q9NQE9 182 aaKnown RBP7.71□□□□□ -1.18
HMGB1-203ENST00000341423 TMED7Q9Y3B3 224 aa7.71□□□□□ -1.18
HMGB1-203ENST00000341423 CADP27708 2225 aa7.71□□□□□ -1.18
HMGB1-203ENST00000341423 ZNF785A8K8V0 405 aa7.71□□□□□ -1.18
HMGB1-203ENST00000341423 OR4A8P0C604 315 aa7.71□□□□□ -1.18
HMGB1-203ENST00000341423 ZDHHC11BP0C7U3 371 aa7.71□□□□□ -1.18
HMGB1-203ENST00000341423 CD8BP10966 210 aa7.71□□□□□ -1.18
HMGB1-203ENST00000341423 ALKBH6Q3KRA9 238 aa7.71□□□□□ -1.18
HMGB1-203ENST00000341423 TIMM50Q3ZCQ8 353 aa7.71□□□□□ -1.18
HMGB1-203ENST00000341423 SEZ6L2Q6UXD5 910 aa7.71□□□□□ -1.18
HMGB1-203ENST00000341423 MOB3BQ86TA1 216 aa7.71□□□□□ -1.18
HMGB1-203ENST00000341423 ERI1Q8IV48 349 aaKnown RBP7.71□□□□□ -1.18
HMGB1-203ENST00000341423 MUC15Q8N387 334 aa7.71□□□□□ -1.18
HMGB1-203ENST00000341423 SLC25A45Q8N413 288 aa7.71□□□□□ -1.18
HMGB1-203ENST00000341423 OR51A7Q8NH64 312 aa7.71□□□□□ -1.18
HMGB1-203ENST00000341423 SNRNP40Q96DI7 357 aaKnown RBP7.71□□□□□ -1.18
HMGB1-203ENST00000341423 ZNF347Q96SE7 839 aa7.71□□□□□ -1.18
HMGB1-203ENST00000341423 FGFBP2Q9BYJ0 223 aa7.71□□□□□ -1.18
HMGB1-203ENST00000341423 C7orf69Q9H7B7 122 aa7.71□□□□□ -1.18
HMGB1-203ENST00000341423 NIPAL2Q9H841 368 aa7.71□□□□□ -1.18
HMGB1-203ENST00000341423 ACSS1Q9NUB1 689 aaPredicted RBP7.71□□□□□ -1.18
HMGB1-203ENST00000341423 GALPQ9UBC7 116 aa7.71□□□□□ -1.18
HMGB1-203ENST00000341423 ALS2Q96Q42 1657 aa7.71□□□□□ -1.18
HMGB1-203ENST00000341423 USP54Q70EL1 1684 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 A0A1W2PRD5 423 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 A0A1W2PRF3 423 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 A0A1W2PRM7 423 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 AGAP14A8MT82 685 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 HOXB3P14651 431 aaPredicted RBP7.7□□□□□ -1.18
HMGB1-203ENST00000341423 GLRA1P23415 457 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 COX7A1P24310 79 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 PRRX1P54821 245 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 ARL13AQ5H913 290 aaPredicted RBP7.7□□□□□ -1.18
HMGB1-203ENST00000341423 DDI2Q5TDH0 399 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 RAB12Q6IQ22 244 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 GRINAQ7Z429 371 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 OR2Z1Q8NG97 314 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 OR13G1Q8NGZ3 307 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 OR4K15Q8NH41 348 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 MFSD8Q8NHS3 518 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 FBXO25Q8TCJ0 367 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 TMEM100Q9NV29 134 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 SLC2A6Q9UGQ3 507 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 TPRKBQ9Y3C4 175 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 HIVEP2P31629 2446 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 ZNF195O14628 629 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 OPN1MWP04001 364 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 IGHV4-34P06331 123 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 OPN1MW2P0DN77 364 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 OPN1MW3P0DN78 364 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 ADAM8P78325 824 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 DCST2Q5T1A1 773 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms