RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 PSG6Q00889 435 aa12.79□□□□□ -0.36
CTHRC1-201ENST00000330295 SPDYE7PQ495Y7 208 aa12.79□□□□□ -0.36
CTHRC1-201ENST00000330295 FBXW9Q5XUX1 488 aa12.79□□□□□ -0.36
CTHRC1-201ENST00000330295 C17orf107Q6ZR85 190 aa12.79□□□□□ -0.36
CTHRC1-201ENST00000330295 RHOUQ7L0Q8 258 aa12.79□□□□□ -0.36
CTHRC1-201ENST00000330295 ZCCHC24Q8N2G6 241 aaKnown RBP12.79□□□□□ -0.36
CTHRC1-201ENST00000330295 CDRT4Q8N9R6 151 aa12.79□□□□□ -0.36
CTHRC1-201ENST00000330295 WDR31Q8NA23 367 aa12.79□□□□□ -0.36
CTHRC1-201ENST00000330295 VPS37AQ8NEZ2 397 aa12.79□□□□□ -0.36
CTHRC1-201ENST00000330295 POC1BQ8TC44 478 aa12.79□□□□□ -0.36
CTHRC1-201ENST00000330295 DYDC1Q8WWB3 177 aa12.79□□□□□ -0.36
CTHRC1-201ENST00000330295 OR5P2Q8WZ92 322 aa12.79□□□□□ -0.36
CTHRC1-201ENST00000330295 CIDECQ96AQ7 238 aaPredicted RBP12.79□□□□□ -0.36
CTHRC1-201ENST00000330295 ATP6V1G3Q96LB4 118 aa12.79□□□□□ -0.36
CTHRC1-201ENST00000330295 PPP1R36Q96LQ0 422 aa12.79□□□□□ -0.36
CTHRC1-201ENST00000330295 C1orf147Q96MC9 270 aaPredicted RBP12.79□□□□□ -0.36
CTHRC1-201ENST00000330295 MUS81Q96NY9 551 aa12.79□□□□□ -0.36
CTHRC1-201ENST00000330295 ZNF300Q96RE9 604 aaPredicted RBP12.79□□□□□ -0.36
CTHRC1-201ENST00000330295 SORT1Q99523 831 aa12.79□□□□□ -0.36
CTHRC1-201ENST00000330295 NUF2Q9BZD4 464 aa12.79□□□□□ -0.36
CTHRC1-201ENST00000330295 DPY30Q9C005 99 aa12.79□□□□□ -0.36
CTHRC1-201ENST00000330295 RACGAP1Q9H0H5 632 aa12.79□□□□□ -0.36
CTHRC1-201ENST00000330295 MED17Q9NVC6 651 aa12.79□□□□□ -0.36
CTHRC1-201ENST00000330295 TREM2Q9NZC2 230 aa12.79□□□□□ -0.36
CTHRC1-201ENST00000330295 GIMAP2Q9UG22 337 aa12.79□□□□□ -0.36
CTHRC1-201ENST00000330295 MMP24Q9Y5R2 645 aa12.79□□□□□ -0.36
CTHRC1-201ENST00000330295 A0A0G2JMP0 313 aa12.78□□□□□ -0.36
CTHRC1-201ENST00000330295 A0A0X1KG70 313 aa12.78□□□□□ -0.36
CTHRC1-201ENST00000330295 HMGB1P1B2RPK0 211 aaPredicted RBP12.78□□□□□ -0.36
CTHRC1-201ENST00000330295 CFLARO15519 480 aa12.78□□□□□ -0.36
CTHRC1-201ENST00000330295 SHOX2O60902 331 aaPredicted RBP12.78□□□□□ -0.36
CTHRC1-201ENST00000330295 IGHV3-9P01782 118 aa12.78□□□□□ -0.36
CTHRC1-201ENST00000330295 KRT16P08779 473 aa12.78□□□□□ -0.36
CTHRC1-201ENST00000330295 G6PDP11413 515 aa12.78□□□□□ -0.36
CTHRC1-201ENST00000330295 GABRA3P34903 492 aa12.78□□□□□ -0.36
CTHRC1-201ENST00000330295 PRIM2P49643 509 aa12.78□□□□□ -0.36
CTHRC1-201ENST00000330295 ZNF41P51814 821 aaPredicted RBP12.78□□□□□ -0.36
CTHRC1-201ENST00000330295 CLNS1AP54105 237 aaKnown RBP12.78□□□□□ -0.36
CTHRC1-201ENST00000330295 CLDN8P56748 225 aa12.78□□□□□ -0.36
CTHRC1-201ENST00000330295 IL1RL1Q01638 556 aa12.78□□□□□ -0.36
CTHRC1-201ENST00000330295 ZP4Q12836 540 aa12.78□□□□□ -0.36
CTHRC1-201ENST00000330295 PTGR1Q14914 329 aa12.78□□□□□ -0.36
CTHRC1-201ENST00000330295 GABRA6Q16445 453 aa12.78□□□□□ -0.36
CTHRC1-201ENST00000330295 PRSS53Q2L4Q9 553 aa12.78□□□□□ -0.36
CTHRC1-201ENST00000330295 TUSC1Q2TAM9 212 aa12.78□□□□□ -0.36
CTHRC1-201ENST00000330295 PGS1Q32NB8 556 aa12.78□□□□□ -0.36
CTHRC1-201ENST00000330295 OR7E24Q6IFN5 339 aa12.78□□□□□ -0.36
CTHRC1-201ENST00000330295 ZCCHC12Q6PEW1 402 aa12.78□□□□□ -0.36
CTHRC1-201ENST00000330295 APOOLQ6UXV4 268 aa12.78□□□□□ -0.36
CTHRC1-201ENST00000330295 DOK3Q7L591 496 aa12.78□□□□□ -0.36
CTHRC1-201ENST00000330295 UBE2J2Q8N2K1 259 aa12.78□□□□□ -0.36
CTHRC1-201ENST00000330295 OR7A2PQ8NGA2 310 aa12.78□□□□□ -0.36
CTHRC1-201ENST00000330295 OR4M2Q8NGB6 313 aa12.78□□□□□ -0.36
CTHRC1-201ENST00000330295 GPR151Q8TDV0 419 aa12.78□□□□□ -0.36
CTHRC1-201ENST00000330295 DVL3Q92997 716 aaPredicted RBP12.78□□□□□ -0.36
CTHRC1-201ENST00000330295 MOAP1Q96BY2 351 aa12.78□□□□□ -0.36
CTHRC1-201ENST00000330295 MS4A4EQ96PG1 132 aa12.78□□□□□ -0.36
CTHRC1-201ENST00000330295 RBM4BQ9BQ04 359 aaKnown RBP12.78□□□□□ -0.36
CTHRC1-201ENST00000330295 MEAF6Q9HAF1 191 aa12.78□□□□□ -0.36
CTHRC1-201ENST00000330295 EQTNQ9NQ60 294 aa12.78□□□□□ -0.36
CTHRC1-201ENST00000330295 PNPOQ9NVS9 261 aa12.78□□□□□ -0.36
CTHRC1-201ENST00000330295 TAS2R16Q9NYV7 291 aa12.78□□□□□ -0.36
CTHRC1-201ENST00000330295 KNG1P01042 644 aa12.77□□□□□ -0.37
CTHRC1-201ENST00000330295 ALOX5P09917 674 aa12.77□□□□□ -0.37
CTHRC1-201ENST00000330295 LAMP1P11279 417 aa12.77□□□□□ -0.37
CTHRC1-201ENST00000330295 FRKP42685 505 aaPredicted RBP12.77□□□□□ -0.37
CTHRC1-201ENST00000330295 GPR6P46095 362 aaPredicted RBP12.77□□□□□ -0.37
CTHRC1-201ENST00000330295 SLC25A3Q00325 362 aa12.77□□□□□ -0.37
CTHRC1-201ENST00000330295 TP53BP2Q13625 1128 aa12.77□□□□□ -0.37
CTHRC1-201ENST00000330295 BEAN1Q3B7T3 259 aa12.77□□□□□ -0.37
CTHRC1-201ENST00000330295 GALNT5Q7Z7M9 940 aa12.77□□□□□ -0.37
CTHRC1-201ENST00000330295 CARM1Q86X55 608 aa12.77□□□□□ -0.37
CTHRC1-201ENST00000330295 OR56A1Q8NGH5 318 aa12.77□□□□□ -0.37
CTHRC1-201ENST00000330295 LRRC8CQ8TDW0 803 aa12.77□□□□□ -0.37
CTHRC1-201ENST00000330295 ACTRT2Q8TDY3 377 aa12.77□□□□□ -0.37
CTHRC1-201ENST00000330295 ZNF75CPQ92670 426 aaPredicted RBP12.77□□□□□ -0.37
CTHRC1-201ENST00000330295 SLC25A28Q96A46 364 aa12.77□□□□□ -0.37
CTHRC1-201ENST00000330295 COQ8BQ96D53 544 aa12.77□□□□□ -0.37
CTHRC1-201ENST00000330295 CHMP6Q96FZ7 201 aa12.77□□□□□ -0.37
CTHRC1-201ENST00000330295 ZBTB18Q99592 522 aa12.77□□□□□ -0.37
CTHRC1-201ENST00000330295 CITED1Q99966 193 aa12.77□□□□□ -0.37
CTHRC1-201ENST00000330295 LMF2Q9BU23 707 aaKnown RBP12.77□□□□□ -0.37
CTHRC1-201ENST00000330295 DUSP26Q9BV47 211 aa12.77□□□□□ -0.37
CTHRC1-201ENST00000330295 C20orf27Q9GZN8 174 aa12.77□□□□□ -0.37
CTHRC1-201ENST00000330295 COQ10BQ9H8M1 238 aa12.77□□□□□ -0.37
CTHRC1-201ENST00000330295 ZCCHC3Q9NUD5 404 aaKnown RBP12.77□□□□□ -0.37
CTHRC1-201ENST00000330295 FAF1Q9UNN5 650 aaPredicted RBP12.77□□□□□ -0.37
CTHRC1-201ENST00000330295 ZNF724A8MTY0 619 aa12.76□□□□□ -0.37
CTHRC1-201ENST00000330295 KLF11O14901 512 aa12.76□□□□□ -0.37
CTHRC1-201ENST00000330295 WNT9BO14905 357 aa12.76□□□□□ -0.37
CTHRC1-201ENST00000330295 SNNO75324 88 aaPredicted RBP12.76□□□□□ -0.37
CTHRC1-201ENST00000330295 UTS2O95399 124 aa12.76□□□□□ -0.37
CTHRC1-201ENST00000330295 PSMG1O95456 288 aa12.76□□□□□ -0.37
CTHRC1-201ENST00000330295 FSHBP01225 129 aa12.76□□□□□ -0.37
CTHRC1-201ENST00000330295 PRB2P02812 416 aaPredicted RBP12.76□□□□□ -0.37
CTHRC1-201ENST00000330295 KITP10721 976 aa12.76□□□□□ -0.37
CTHRC1-201ENST00000330295 H2AFXP16104 143 aaPredicted RBP12.76□□□□□ -0.37
CTHRC1-201ENST00000330295 OMGP23515 440 aa12.76□□□□□ -0.37
CTHRC1-201ENST00000330295 DPY19L1Q2PZI1 675 aa12.76□□□□□ -0.37
CTHRC1-201ENST00000330295 ZNF385BQ569K4 471 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms