RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 EDNRAP25101 427 aa17.56■□□□□ 0.4
RTN4-201ENST00000317610 TSPAN5P62079 268 aa17.56■□□□□ 0.4
RTN4-201ENST00000317610 OPCMLQ14982 345 aa17.56■□□□□ 0.4
RTN4-201ENST00000317610 DEFB134Q4QY38 66 aa17.56■□□□□ 0.4
RTN4-201ENST00000317610 FAM78AQ5JUQ0 283 aa17.56■□□□□ 0.4
RTN4-201ENST00000317610 FIGNL1Q6PIW4 674 aa17.56■□□□□ 0.4
RTN4-201ENST00000317610 ZCCHC10Q8TBK6 192 aa17.56■□□□□ 0.4
RTN4-201ENST00000317610 LCN9Q8WX39 176 aa17.56■□□□□ 0.4
RTN4-201ENST00000317610 RBPMSQ93062 196 aaKnown RBP17.56■□□□□ 0.4
RTN4-201ENST00000317610 OR2A5Q96R48 311 aa17.56■□□□□ 0.4
RTN4-201ENST00000317610 MYADMQ96S97 322 aa17.56■□□□□ 0.4
RTN4-201ENST00000317610 SMAD5Q99717 465 aaKnown RBP17.56■□□□□ 0.4
RTN4-201ENST00000317610 UTP23Q9BRU9 249 aaKnown RBP17.56■□□□□ 0.4
RTN4-201ENST00000317610 NOX4Q9NPH5 578 aa17.56■□□□□ 0.4
RTN4-201ENST00000317610 MRPL15Q9P015 296 aaKnown RBP17.56■□□□□ 0.4
RTN4-201ENST00000317610 NCDNQ9UBB6 729 aa17.56■□□□□ 0.4
RTN4-201ENST00000317610 PLSCR5A0PG75 271 aa17.56■□□□□ 0.4
RTN4-201ENST00000317610 PDCD5O14737 125 aa17.56■□□□□ 0.4
RTN4-201ENST00000317610 SNAPC5O75971 98 aa17.56■□□□□ 0.4
RTN4-201ENST00000317610 KRT33AO76009 404 aa17.56■□□□□ 0.4
RTN4-201ENST00000317610 IFI6P09912 130 aa17.56■□□□□ 0.4
RTN4-201ENST00000317610 CCL5P13501 91 aa17.56■□□□□ 0.4
RTN4-201ENST00000317610 HIST1H1CP16403 213 aaKnown RBP17.56■□□□□ 0.4
RTN4-201ENST00000317610 ILF3Q12906 894 aaKnown RBP eCLIP17.56■□□□□ 0.4
RTN4-201ENST00000317610 ZNF267Q14586 743 aaPredicted RBP17.56■□□□□ 0.4
RTN4-201ENST00000317610 NHLRC3Q5JS37 347 aa17.56■□□□□ 0.4
RTN4-201ENST00000317610 GLDNQ6ZMI3 551 aaPredicted RBP17.56■□□□□ 0.4
RTN4-201ENST00000317610 SDR9C7Q8NEX9 313 aa17.56■□□□□ 0.4
RTN4-201ENST00000317610 DOK4Q8TEW6 326 aa17.56■□□□□ 0.4
RTN4-201ENST00000317610 SNX33Q8WV41 574 aa17.56■□□□□ 0.4
RTN4-201ENST00000317610 CNOT9Q92600 299 aaKnown RBP17.56■□□□□ 0.4
RTN4-201ENST00000317610 PDCD1LG2Q9BQ51 273 aa17.56■□□□□ 0.4
RTN4-201ENST00000317610 OR10A4Q9H209 315 aa17.56■□□□□ 0.4
RTN4-201ENST00000317610 IL21RQ9HBE5 538 aa17.56■□□□□ 0.4
RTN4-201ENST00000317610 BET1O15155 118 aa17.55■□□□□ 0.4
RTN4-201ENST00000317610 POU6F2P78424 691 aaPredicted RBP17.55■□□□□ 0.4
RTN4-201ENST00000317610 ID2Q02363 134 aa17.55■□□□□ 0.4
RTN4-201ENST00000317610 PDGFRLQ15198 375 aa17.55■□□□□ 0.4
RTN4-201ENST00000317610 C2orf27AQ580R0 203 aa17.55■□□□□ 0.4
RTN4-201ENST00000317610 GRAMD2AQ8IUY3 354 aa17.55■□□□□ 0.4
RTN4-201ENST00000317610 OR4K13Q8NH42 304 aa17.55■□□□□ 0.4
RTN4-201ENST00000317610 FLVCR1-AS1Q8TAF5 88 aa17.55■□□□□ 0.4
RTN4-201ENST00000317610 ARSGQ96EG1 525 aa17.55■□□□□ 0.4
RTN4-201ENST00000317610 SCARF2Q96GP6 870 aaPredicted RBP17.55■□□□□ 0.4
RTN4-201ENST00000317610 CCDC86Q9H6F5 360 aaKnown RBP17.55■□□□□ 0.4
RTN4-201ENST00000317610 LYRM4Q9HD34 91 aa17.55■□□□□ 0.4
RTN4-201ENST00000317610 GNG8Q9UK08 70 aa17.55■□□□□ 0.4
RTN4-201ENST00000317610 COL4A2P08572 1712 aa17.55■□□□□ 0.4
RTN4-201ENST00000317610 MYO7AQ13402 2215 aa17.55■□□□□ 0.4
RTN4-201ENST00000317610 GXYLT2A0PJZ3 443 aa17.55■□□□□ 0.4
RTN4-201ENST00000317610 CDK2AP1O14519 115 aa17.55■□□□□ 0.4
RTN4-201ENST00000317610 GIPP09681 153 aaPredicted RBP17.55■□□□□ 0.4
RTN4-201ENST00000317610 CTNNB1P35222 781 aa17.55■□□□□ 0.4
RTN4-201ENST00000317610 NAA10P41227 235 aaPredicted RBP17.55■□□□□ 0.4
RTN4-201ENST00000317610 PTH2RP49190 550 aa17.55■□□□□ 0.4
RTN4-201ENST00000317610 DIO1P49895 249 aa17.55■□□□□ 0.4
RTN4-201ENST00000317610 MECP2P51608 486 aaKnown RBP17.55■□□□□ 0.4
RTN4-201ENST00000317610 PPP2CBP62714 309 aa17.55■□□□□ 0.4
RTN4-201ENST00000317610 PPP2CAP67775 309 aa17.55■□□□□ 0.4
RTN4-201ENST00000317610 MGAT2Q10469 447 aa17.55■□□□□ 0.4
RTN4-201ENST00000317610 LINC00114Q6XXX2 140 aa17.55■□□□□ 0.4
RTN4-201ENST00000317610 ZAR1Q86SH2 424 aa17.55■□□□□ 0.4
RTN4-201ENST00000317610 PPIEQ9UNP9 301 aaKnown RBP17.55■□□□□ 0.4
RTN4-201ENST00000317610 COPS3Q9UNS2 423 aa17.55■□□□□ 0.4
RTN4-201ENST00000317610 A0A1W2PP55 124 aa17.54■□□□□ 0.4
RTN4-201ENST00000317610 ANKRD20A5PA0PJZ0 165 aa17.54■□□□□ 0.4
RTN4-201ENST00000317610 SYNDIG1LA6NDD5 238 aa17.54■□□□□ 0.4
RTN4-201ENST00000317610 OR6C65A6NJZ3 312 aa17.54■□□□□ 0.4
RTN4-201ENST00000317610 ARPC1BO15143 372 aaKnown RBP17.54■□□□□ 0.4
RTN4-201ENST00000317610 IFNGR1P15260 489 aa17.54■□□□□ 0.4
RTN4-201ENST00000317610 C5AR1P21730 350 aa17.54■□□□□ 0.4
RTN4-201ENST00000317610 IGFALSP35858 605 aa17.54■□□□□ 0.4
RTN4-201ENST00000317610 ACAA2P42765 397 aaKnown RBP17.54■□□□□ 0.4
RTN4-201ENST00000317610 MRPS10P82664 201 aaKnown RBP17.54■□□□□ 0.4
RTN4-201ENST00000317610 PRICKLE4Q2TBC4 344 aa17.54■□□□□ 0.4
RTN4-201ENST00000317610 HES5Q5TA89 166 aa17.54■□□□□ 0.4
RTN4-201ENST00000317610 GALNT11Q8NCW6 608 aa17.54■□□□□ 0.4
RTN4-201ENST00000317610 C7orf57Q8NEG2 295 aa17.54■□□□□ 0.4
RTN4-201ENST00000317610 HOXB13Q92826 284 aaPredicted RBP17.54■□□□□ 0.4
RTN4-201ENST00000317610 TRIM43Q96BQ3 446 aaPredicted RBP17.54■□□□□ 0.4
RTN4-201ENST00000317610 ASB16Q96NS5 453 aa17.54■□□□□ 0.4
RTN4-201ENST00000317610 TMPRSS13Q9BYE2 586 aa17.54■□□□□ 0.4
RTN4-201ENST00000317610 TAS2R5Q9NYW4 299 aa17.54■□□□□ 0.4
RTN4-201ENST00000317610 ENTPD2Q9Y5L3 495 aa17.54■□□□□ 0.4
RTN4-201ENST00000317610 URADA6NGE7 173 aa17.54■□□□□ 0.4
RTN4-201ENST00000317610 LRRC72A6NJI9 287 aa17.54■□□□□ 0.4
RTN4-201ENST00000317610 FGF17O60258 216 aa17.54■□□□□ 0.4
RTN4-201ENST00000317610 ADAM11O75078 769 aa17.54■□□□□ 0.4
RTN4-201ENST00000317610 NDUFB2O95178 105 aa17.54■□□□□ 0.4
RTN4-201ENST00000317610 ADH1BP00325 375 aa17.54■□□□□ 0.4
RTN4-201ENST00000317610 CXCL2P19875 107 aa17.54■□□□□ 0.4
RTN4-201ENST00000317610 GABRA3P34903 492 aa17.54■□□□□ 0.4
RTN4-201ENST00000317610 MNDAP41218 407 aa17.54■□□□□ 0.4
RTN4-201ENST00000317610 RAD52P43351 418 aa17.54■□□□□ 0.4
RTN4-201ENST00000317610 RPL6Q02878 288 aaKnown RBP17.54■□□□□ 0.4
RTN4-201ENST00000317610 APOOLQ6UXV4 268 aa17.54■□□□□ 0.4
RTN4-201ENST00000317610 PRSS42Q7Z5A4 293 aa17.54■□□□□ 0.4
RTN4-201ENST00000317610 FCAMRQ8WWV6 532 aa17.54■□□□□ 0.4
RTN4-201ENST00000317610 GCDHQ92947 438 aaPredicted RBP17.54■□□□□ 0.4
RTN4-201ENST00000317610 MRPL48Q96GC5 212 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms