RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 SLC35G4P0C7Q5 338 aa13.53□□□□□ -0.24
COL6A2-202ENST00000310645 YOD1Q5VVQ6 348 aaPredicted RBP13.53□□□□□ -0.24
COL6A2-202ENST00000310645 OR6K6Q8NGW6 343 aa13.53□□□□□ -0.24
COL6A2-202ENST00000310645 OR10K1Q8NGX5 313 aa13.53□□□□□ -0.24
COL6A2-202ENST00000310645 MS4A6EQ96DS6 147 aa13.53□□□□□ -0.24
COL6A2-202ENST00000310645 LCORQ96JN0 433 aaPredicted RBP13.53□□□□□ -0.24
COL6A2-202ENST00000310645 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.53□□□□□ -0.24
COL6A2-202ENST00000310645 XIRP2A4UGR9 3374 aa13.53□□□□□ -0.24
COL6A2-202ENST00000310645 C17orf113A0A1B0GUU1 675 aa13.53□□□□□ -0.24
COL6A2-202ENST00000310645 F5H5P2 479 aa13.53□□□□□ -0.24
COL6A2-202ENST00000310645 PEX12O00623 359 aa13.53□□□□□ -0.24
COL6A2-202ENST00000310645 PIN1P1O15428 100 aa13.53□□□□□ -0.24
COL6A2-202ENST00000310645 OR2A4O95047 310 aa13.53□□□□□ -0.24
COL6A2-202ENST00000310645 PCCBP05166 539 aa13.53□□□□□ -0.24
COL6A2-202ENST00000310645 F3P13726 295 aa13.53□□□□□ -0.24
COL6A2-202ENST00000310645 PTH2RP49190 550 aa13.53□□□□□ -0.24
COL6A2-202ENST00000310645 RPS11P62280 158 aaKnown RBP eCLIP13.53□□□□□ -0.24
COL6A2-202ENST00000310645 BTN3A2P78410 334 aa13.53□□□□□ -0.24
COL6A2-202ENST00000310645 PCGF3Q3KNV8 242 aa13.53□□□□□ -0.24
COL6A2-202ENST00000310645 MRPL2Q5T653 305 aaKnown RBP13.53□□□□□ -0.24
COL6A2-202ENST00000310645 SLC48A1Q6P1K1 146 aa13.53□□□□□ -0.24
COL6A2-202ENST00000310645 TMEM88Q6PEY1 159 aa13.53□□□□□ -0.24
COL6A2-202ENST00000310645 ASPGQ86U10 573 aa13.53□□□□□ -0.24
COL6A2-202ENST00000310645 SDR16C5Q8N3Y7 309 aa13.53□□□□□ -0.24
COL6A2-202ENST00000310645 TEX19Q8NA77 164 aa13.53□□□□□ -0.24
COL6A2-202ENST00000310645 OR2A7Q96R45 310 aa13.53□□□□□ -0.24
COL6A2-202ENST00000310645 SIGLEC7Q9Y286 467 aa13.53□□□□□ -0.24
COL6A2-202ENST00000310645 MED31Q9Y3C7 131 aa13.53□□□□□ -0.24
COL6A2-202ENST00000310645 ZNF879B4DU55 563 aa13.52□□□□□ -0.24
COL6A2-202ENST00000310645 IMPA2O14732 288 aa13.52□□□□□ -0.24
COL6A2-202ENST00000310645 TGM5O43548 720 aa13.52□□□□□ -0.24
COL6A2-202ENST00000310645 EGFP01133 1207 aa13.52□□□□□ -0.24
COL6A2-202ENST00000310645 CPN1P15169 458 aa13.52□□□□□ -0.24
COL6A2-202ENST00000310645 ST8SIA6P61647 398 aa13.52□□□□□ -0.24
COL6A2-202ENST00000310645 TRA2BP62995 288 aaKnown RBP13.52□□□□□ -0.24
COL6A2-202ENST00000310645 CTAG1AP78358 180 aa13.52□□□□□ -0.24
COL6A2-202ENST00000310645 MC2RQ01718 297 aa13.52□□□□□ -0.24
COL6A2-202ENST00000310645 DHODHQ02127 395 aa13.52□□□□□ -0.24
COL6A2-202ENST00000310645 DUSP5Q16690 384 aa13.52□□□□□ -0.24
COL6A2-202ENST00000310645 ABHD17CQ6PCB6 329 aa13.52□□□□□ -0.24
COL6A2-202ENST00000310645 FIGNL1Q6PIW4 674 aa13.52□□□□□ -0.24
COL6A2-202ENST00000310645 CDH26Q8IXH8 852 aa13.52□□□□□ -0.24
COL6A2-202ENST00000310645 OR8S1Q8NH09 359 aa13.52□□□□□ -0.24
COL6A2-202ENST00000310645 GFI1Q99684 422 aa13.52□□□□□ -0.24
COL6A2-202ENST00000310645 LGR4Q9BXB1 951 aa13.52□□□□□ -0.24
COL6A2-202ENST00000310645 TSPAN10Q9H1Z9 355 aaPredicted RBP13.52□□□□□ -0.24
COL6A2-202ENST00000310645 PRDM7Q9NQW5 492 aa13.52□□□□□ -0.24
COL6A2-202ENST00000310645 ATPIF1Q9UII2 106 aa13.52□□□□□ -0.24
COL6A2-202ENST00000310645 ZNF223Q9UK11 482 aaPredicted RBP13.52□□□□□ -0.24
COL6A2-202ENST00000310645 DENND4CQ5VZ89 1909 aa13.52□□□□□ -0.24
COL6A2-202ENST00000310645 ANKRD20A5PA0PJZ0 165 aa13.52□□□□□ -0.25
COL6A2-202ENST00000310645 SPINT1O43278 529 aa13.52□□□□□ -0.25
COL6A2-202ENST00000310645 AKR1C2P52895 323 aa13.52□□□□□ -0.25
COL6A2-202ENST00000310645 ART1P52961 327 aa13.52□□□□□ -0.25
COL6A2-202ENST00000310645 GMFBP60983 142 aa13.52□□□□□ -0.25
COL6A2-202ENST00000310645 AKR1C1Q04828 323 aa13.52□□□□□ -0.25
COL6A2-202ENST00000310645 C4orf46Q504U0 113 aa13.52□□□□□ -0.25
COL6A2-202ENST00000310645 BEX5Q5H9J7 111 aa13.52□□□□□ -0.25
COL6A2-202ENST00000310645 OVCH1Q7RTY7 1134 aa13.52□□□□□ -0.25
COL6A2-202ENST00000310645 HSD17B13Q7Z5P4 300 aaPredicted RBP13.52□□□□□ -0.25
COL6A2-202ENST00000310645 OR5M9Q8NGP3 310 aa13.52□□□□□ -0.25
COL6A2-202ENST00000310645 OR8K3Q8NH51 312 aa13.52□□□□□ -0.25
COL6A2-202ENST00000310645 ATOH1Q92858 354 aaPredicted RBP13.52□□□□□ -0.25
COL6A2-202ENST00000310645 EXOSC3Q9NQT5 275 aaKnown RBP13.52□□□□□ -0.25
COL6A2-202ENST00000310645 GMEB2Q9UKD1 530 aa13.52□□□□□ -0.25
COL6A2-202ENST00000310645 NDUFB6O95139 128 aa13.52□□□□□ -0.25
COL6A2-202ENST00000310645 LDOC1O95751 146 aaPredicted RBP13.52□□□□□ -0.25
COL6A2-202ENST00000310645 WDPCPO95876 746 aa13.52□□□□□ -0.25
COL6A2-202ENST00000310645 NDUFS1P28331 727 aa13.52□□□□□ -0.25
COL6A2-202ENST00000310645 ACTC1P68032 377 aa13.52□□□□□ -0.25
COL6A2-202ENST00000310645 ACTA1P68133 377 aa13.52□□□□□ -0.25
COL6A2-202ENST00000310645 PRDX1Q06830 199 aaKnown RBP13.52□□□□□ -0.25
COL6A2-202ENST00000310645 ODF4Q2M2E3 257 aa13.52□□□□□ -0.25
COL6A2-202ENST00000310645 ELFN2Q5R3F8 820 aa13.52□□□□□ -0.25
COL6A2-202ENST00000310645 PRAMEF8Q5VWM4 474 aa13.52□□□□□ -0.25
COL6A2-202ENST00000310645 PRAMEF7Q5VXH5 474 aa13.52□□□□□ -0.25
COL6A2-202ENST00000310645 ARRDC3Q96B67 414 aa13.52□□□□□ -0.25
COL6A2-202ENST00000310645 ZCCHC4Q9H5U6 513 aa13.52□□□□□ -0.25
COL6A2-202ENST00000310645 MED9Q9NWA0 146 aa13.52□□□□□ -0.25
COL6A2-202ENST00000310645 RNF186Q9NXI6 227 aa13.52□□□□□ -0.25
COL6A2-202ENST00000310645 PLCL2Q9UPR0 1127 aa13.52□□□□□ -0.25
COL6A2-202ENST00000310645 FOXJ3Q9UPW0 622 aa13.52□□□□□ -0.25
COL6A2-202ENST00000310645 PRELID3BQ9Y3B1 194 aa13.52□□□□□ -0.25
COL6A2-202ENST00000310645 PQBP1O60828 265 aaKnown RBP13.51□□□□□ -0.25
COL6A2-202ENST00000310645 SNRNP200O75643 2136 aaKnown RBP13.51□□□□□ -0.25
COL6A2-202ENST00000310645 PCDH8O95206 1070 aa13.51□□□□□ -0.25
COL6A2-202ENST00000310645 C8AP07357 584 aa13.51□□□□□ -0.25
COL6A2-202ENST00000310645 STARP49675 285 aa13.51□□□□□ -0.25
COL6A2-202ENST00000310645 GXYLT1Q4G148 440 aa13.51□□□□□ -0.25
COL6A2-202ENST00000310645 PDSS1Q5T2R2 415 aa13.51□□□□□ -0.25
COL6A2-202ENST00000310645 B3GNTL1Q67FW5 361 aaPredicted RBP13.51□□□□□ -0.25
COL6A2-202ENST00000310645 MUC20Q8N307 709 aaPredicted RBP13.51□□□□□ -0.25
COL6A2-202ENST00000310645 PXT1Q8NFP0 134 aa13.51□□□□□ -0.25
COL6A2-202ENST00000310645 OR4D10Q8NGI6 311 aa13.51□□□□□ -0.25
COL6A2-202ENST00000310645 STK35Q8TDR2 534 aa13.51□□□□□ -0.25
COL6A2-202ENST00000310645 PNPLA2Q96AD5 504 aa13.51□□□□□ -0.25
COL6A2-202ENST00000310645 MOAP1Q96BY2 351 aa13.51□□□□□ -0.25
COL6A2-202ENST00000310645 ZNF558Q96NG5 402 aa13.51□□□□□ -0.25
COL6A2-202ENST00000310645 GAL3ST1Q99999 423 aa13.51□□□□□ -0.25
COL6A2-202ENST00000310645 PCBD2Q9H0N5 130 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms