RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 FRMPD2BQ6IN97 320 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 GK5Q6ZS86 529 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 GALNT5Q7Z7M9 940 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 CLEC14AQ86T13 490 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 SEMA6DQ8NFY4 1073 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 TMEM239Q8WW34 195 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 ZNF285Q96NJ3 590 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 VCX2Q9H322 139 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 GALNT9Q9HCQ5 603 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 SH3BGRL2Q9UJC5 107 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 H3BMQ9 156 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 CHRM1P11229 460 aaPredicted RBP3.75□□□□□ -1.81
USH2A-201ENST00000307340 OR8G1Q15617 311 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 EEF1DP3Q658K8 133 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 VN1R2Q8NFZ6 395 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 DYNC2LI1Q8TCX1 351 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 THEM6Q8WUY1 208 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 GCDHQ92947 438 aaPredicted RBP3.75□□□□□ -1.81
USH2A-201ENST00000307340 TAAR8Q969N4 342 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 DHRS9Q9BPW9 319 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 SH3BGRL3Q9H299 93 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 KLRF1Q9NZS2 232 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 TLCD2A6NGC4 264 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 DHRS7CA6NNS2 312 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 J3QW42 95 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 SOCS7O14512 581 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 BET1O15155 118 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 GIPRP48546 466 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 OR12D2P58182 307 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 LINC01559Q495D7 138 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 JMJD6Q6NYC1 403 aaPredicted RBP3.75□□□□□ -1.81
USH2A-201ENST00000307340 F2RL3Q96RI0 385 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 BARHL1Q9BZE3 327 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 ABCG8Q9H221 673 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 GLRX2Q9NS18 164 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 HDGFL3Q9Y3E1 203 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 ICE1Q9Y2F5 2266 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 FAM74A7A6NL05 159 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 AIPO00170 330 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 STC2O76061 302 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 FGF18O76093 207 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 HAND1O96004 215 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 GHRHP01286 108 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 ZNF28P17035 718 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 S100A11P31949 105 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 PAGE3Q5JUK9 113 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 TMEM201Q5SNT2 666 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 C1orf53Q5VUE5 145 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 B3GNTL1Q67FW5 361 aaPredicted RBP3.75□□□□□ -1.81
USH2A-201ENST00000307340 NPNTQ6UXI9 565 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 PDXPQ96GD0 296 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 FER1L6-AS2Q96M78 137 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 FIZ1Q96SL8 496 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 PPIL1Q9Y3C6 166 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 TMEM218A2RU14 115 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 M0QZK8 103 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 GGCTO75223 188 aaKnown RBP3.75□□□□□ -1.81
USH2A-201ENST00000307340 AHCYP23526 432 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 GRPRP30550 384 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 CSKP41240 450 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 LSM3P62310 102 aaKnown RBP3.75□□□□□ -1.81
USH2A-201ENST00000307340 TIGITQ495A1 244 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 ACOT7LQ6ZUV0 252 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 GTF2H4Q92759 462 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 DTD2Q96FN9 168 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 CXorf58Q96LI9 332 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 OR51J1Q9H342 316 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 ANAPC1Q9H1A4 1944 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 A0A0J9YY10 115 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 BEST1O76090 585 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 LRRC26Q2I0M4 334 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 ZNF573Q86YE8 665 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 STPG2Q8N412 459 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 CHST4Q8NCG5 386 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 EMG1Q92979 244 aaKnown RBP3.75□□□□□ -1.81
USH2A-201ENST00000307340 MAP3K3Q99759 626 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 GAL3ST1Q99999 423 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 ZNF878C9JN71 531 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 SMAD6O43541 496 aaKnown RBP3.75□□□□□ -1.81
USH2A-201ENST00000307340 CDC123O75794 336 aaPredicted RBP3.75□□□□□ -1.81
USH2A-201ENST00000307340 ACTL6BO94805 426 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 HLA-AP01891 365 aaKnown RBP3.75□□□□□ -1.81
USH2A-201ENST00000307340 ARAFP10398 606 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 PON2Q15165 354 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 UEVLDQ8IX04 471 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 SORT1Q99523 831 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 ARPC5LQ9BPX5 153 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 MFRPQ9BY79 579 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 LRFN1Q9P244 771 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 LPAR3Q9UBY5 353 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 ANHXE9PGG2 379 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 SRMP19623 302 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 STK11Q15831 433 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 GPR155Q7Z3F1 870 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 SNX29P2Q8IUI4 249 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 OR6K3Q8NGY3 331 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 CPT1CQ8TCG5 803 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 CNTNAP3BQ96NU0 1288 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 ARL6Q9H0F7 186 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 BCO1Q9HAY6 547 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms