RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 A6NL46 340 aa12.97□□□□□ -0.33
PRKCB-201ENST00000303531 GCH1P30793 250 aa12.97□□□□□ -0.33
PRKCB-201ENST00000303531 CASP3P42574 277 aa12.97□□□□□ -0.33
PRKCB-201ENST00000303531 MC2RQ01718 297 aa12.97□□□□□ -0.33
PRKCB-201ENST00000303531 ILKQ13418 452 aa12.97□□□□□ -0.33
PRKCB-201ENST00000303531 CDKN3Q16667 212 aa12.97□□□□□ -0.33
PRKCB-201ENST00000303531 BEX5Q5H9J7 111 aa12.97□□□□□ -0.33
PRKCB-201ENST00000303531 OR1J4Q8NGS1 313 aa12.97□□□□□ -0.33
PRKCB-201ENST00000303531 RHBDD1Q8TEB9 315 aa12.97□□□□□ -0.33
PRKCB-201ENST00000303531 GCDHQ92947 438 aaPredicted RBP12.97□□□□□ -0.33
PRKCB-201ENST00000303531 R3HDMLQ9H3Y0 253 aa12.97□□□□□ -0.33
PRKCB-201ENST00000303531 KCNJ16Q9NPI9 418 aa12.97□□□□□ -0.33
PRKCB-201ENST00000303531 OSGIN1Q9UJX0 560 aa12.97□□□□□ -0.33
PRKCB-201ENST00000303531 KLK4Q9Y5K2 254 aa12.97□□□□□ -0.33
PRKCB-201ENST00000303531 TMEM72A0PK05 275 aa12.96□□□□□ -0.33
PRKCB-201ENST00000303531 SCGB2A1O75556 95 aa12.96□□□□□ -0.33
PRKCB-201ENST00000303531 CLDN6P56747 220 aa12.96□□□□□ -0.33
PRKCB-201ENST00000303531 ZNF674Q2M3X9 581 aa12.96□□□□□ -0.33
PRKCB-201ENST00000303531 PRRC2BQ5JSZ5 2229 aaKnown RBP12.96□□□□□ -0.33
PRKCB-201ENST00000303531 IL1F10Q8WWZ1 152 aa12.96□□□□□ -0.33
PRKCB-201ENST00000303531 BIN3Q9NQY0 253 aa12.96□□□□□ -0.33
PRKCB-201ENST00000303531 RAB6AP20340 208 aa12.96□□□□□ -0.33
PRKCB-201ENST00000303531 HBMQ6B0K9 141 aa12.96□□□□□ -0.33
PRKCB-201ENST00000303531 FAM57BQ71RH2 274 aa12.96□□□□□ -0.33
PRKCB-201ENST00000303531 SLC35D2Q76EJ3 337 aa12.96□□□□□ -0.33
PRKCB-201ENST00000303531 TCTN2Q96GX1 697 aa12.96□□□□□ -0.33
PRKCB-201ENST00000303531 OR5M11Q96RB7 305 aa12.96□□□□□ -0.33
PRKCB-201ENST00000303531 MARCH5Q9NX47 278 aa12.96□□□□□ -0.33
PRKCB-201ENST00000303531 EHFQ9NZC4 300 aa12.96□□□□□ -0.33
PRKCB-201ENST00000303531 ZNF593O00488 134 aaPredicted RBP12.96□□□□□ -0.33
PRKCB-201ENST00000303531 CSO75390 466 aaKnown RBP12.96□□□□□ -0.33
PRKCB-201ENST00000303531 ZFAND5O76080 213 aa12.96□□□□□ -0.33
PRKCB-201ENST00000303531 IFNA17P01571 189 aa12.96□□□□□ -0.33
PRKCB-201ENST00000303531 F11P03951 625 aa12.96□□□□□ -0.33
PRKCB-201ENST00000303531 MSL3P1P0C860 447 aa12.96□□□□□ -0.33
PRKCB-201ENST00000303531 IDH3GP51553 393 aaPredicted RBP12.96□□□□□ -0.33
PRKCB-201ENST00000303531 SLC46A3Q7Z3Q1 461 aa12.96□□□□□ -0.33
PRKCB-201ENST00000303531 TM4SF18Q96CE8 201 aa12.96□□□□□ -0.33
PRKCB-201ENST00000303531 KCTD12Q96CX2 325 aaKnown RBP12.96□□□□□ -0.33
PRKCB-201ENST00000303531 METTL17Q9H7H0 456 aaPredicted RBP12.96□□□□□ -0.33
PRKCB-201ENST00000303531 NDUFAF4Q9P032 175 aa12.96□□□□□ -0.33
PRKCB-201ENST00000303531 TSPAN11A1L157 253 aa12.96□□□□□ -0.33
PRKCB-201ENST00000303531 NUPL2O15504 423 aaKnown RBP12.96□□□□□ -0.33
PRKCB-201ENST00000303531 HOXB5P09067 269 aa12.96□□□□□ -0.33
PRKCB-201ENST00000303531 EPHA4P54764 986 aa12.96□□□□□ -0.33
PRKCB-201ENST00000303531 TNK1Q13470 666 aa12.96□□□□□ -0.33
PRKCB-201ENST00000303531 STEAP3Q658P3 488 aa12.96□□□□□ -0.33
PRKCB-201ENST00000303531 GPR155Q7Z3F1 870 aa12.96□□□□□ -0.33
PRKCB-201ENST00000303531 C19orf47Q8N9M1 422 aaKnown RBP12.96□□□□□ -0.33
PRKCB-201ENST00000303531 GHSRQ92847 366 aa12.96□□□□□ -0.33
PRKCB-201ENST00000303531 NEURL3Q96EH8 262 aa12.96□□□□□ -0.33
PRKCB-201ENST00000303531 ALG12Q9BV10 488 aa12.96□□□□□ -0.33
PRKCB-201ENST00000303531 ENKD1Q9H0I2 346 aa12.96□□□□□ -0.33
PRKCB-201ENST00000303531 A4GALTQ9NPC4 353 aa12.96□□□□□ -0.33
PRKCB-201ENST00000303531 PRSS16Q9NQE7 514 aa12.96□□□□□ -0.33
PRKCB-201ENST00000303531 SUSD5O60279 629 aa12.96□□□□□ -0.34
PRKCB-201ENST00000303531 GAREM2Q75VX8 874 aa12.96□□□□□ -0.34
PRKCB-201ENST00000303531 ZNF546Q86UE3 836 aa12.96□□□□□ -0.34
PRKCB-201ENST00000303531 B4DXG7 233 aa12.96□□□□□ -0.34
PRKCB-201ENST00000303531 PRICKLE3O43900 615 aaPredicted RBP12.96□□□□□ -0.34
PRKCB-201ENST00000303531 PIGAP37287 484 aa12.96□□□□□ -0.34
PRKCB-201ENST00000303531 EFNA3P52797 238 aa12.96□□□□□ -0.34
PRKCB-201ENST00000303531 SIRPAP78324 504 aa12.96□□□□□ -0.34
PRKCB-201ENST00000303531 KCNJ8Q15842 424 aa12.96□□□□□ -0.34
PRKCB-201ENST00000303531 GLIPR2Q9H4G4 154 aa12.96□□□□□ -0.34
PRKCB-201ENST00000303531 TACR3P29371 465 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 EIF2DP41214 584 aaKnown RBP12.95□□□□□ -0.34
PRKCB-201ENST00000303531 PFN3P60673 137 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 RAB31Q13636 194 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 TMEM207Q6UWW9 146 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 BCDIN3DQ7Z5W3 292 aaKnown RBP12.95□□□□□ -0.34
PRKCB-201ENST00000303531 OR56B4Q8NH76 319 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 VN1R3Q9BXE9 311 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 GON7Q9BXV9 100 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 TUBB1Q9H4B7 451 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 MMP12P39900 470 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 SORDQ00796 357 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 CAMK2DQ13557 499 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 NXNL2Q5VZ03 156 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 LYSMD4Q5XG99 296 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 ZNF419Q96HQ0 510 aaPredicted RBP12.95□□□□□ -0.34
PRKCB-201ENST00000303531 AMDHD1Q96NU7 426 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 ULBP2Q9BZM5 246 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 DNAJB11Q9UBS4 358 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 TP53TG5Q9Y2B4 290 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 GALR3O60755 368 aaPredicted RBP12.95□□□□□ -0.34
PRKCB-201ENST00000303531 STK11Q15831 433 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 MMP21Q8N119 569 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 LILRA3Q8N6C8 439 aaPredicted RBP12.95□□□□□ -0.34
PRKCB-201ENST00000303531 LGALS14Q8TCE9 139 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 MALSU1Q96EH3 234 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 DIMT1Q9UNQ2 313 aaKnown RBP12.95□□□□□ -0.34
PRKCB-201ENST00000303531 IGLV3-10A0A075B6K4 115 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 OR2T7P0C7T2 308 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 SHC1P29353 583 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 PRKAR1BP31321 381 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 MOB3CQ70IA8 216 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 OR2T27Q8NH04 317 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 OR4K15Q8NH41 348 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 PHOSPHO2Q8TCD6 241 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms