RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 OR2B6P58173 313 aa21.94■■□□□ 1.1
HOXC9-201ENST00000303450 TRAM2Q15035 370 aa21.94■■□□□ 1.1
HOXC9-201ENST00000303450 IQCCQ4KMZ1 466 aa21.94■■□□□ 1.1
HOXC9-201ENST00000303450 ADGRG5Q8IZF4 528 aa21.94■■□□□ 1.1
HOXC9-201ENST00000303450 FNDC9Q8TBE3 224 aa21.94■■□□□ 1.1
HOXC9-201ENST00000303450 CANT1Q8WVQ1 401 aa21.94■■□□□ 1.1
HOXC9-201ENST00000303450 WNT2BQ93097 391 aa21.94■■□□□ 1.1
HOXC9-201ENST00000303450 KTI12Q96EK9 354 aaPredicted RBP21.94■■□□□ 1.1
HOXC9-201ENST00000303450 DMRTA2Q96SC8 542 aa21.94■■□□□ 1.1
HOXC9-201ENST00000303450 ZNF347Q96SE7 839 aa21.94■■□□□ 1.1
HOXC9-201ENST00000303450 PIP5K1AQ99755 562 aa21.94■■□□□ 1.1
HOXC9-201ENST00000303450 TAPBPLQ9BX59 468 aa21.94■■□□□ 1.1
HOXC9-201ENST00000303450 NMNAT1Q9HAN9 279 aaPredicted RBP21.94■■□□□ 1.1
HOXC9-201ENST00000303450 TCRBV3S1A0A5B6 114 aa21.93■■□□□ 1.1
HOXC9-201ENST00000303450 PRSS23O95084 383 aa21.93■■□□□ 1.1
HOXC9-201ENST00000303450 GLI4P10075 376 aa21.93■■□□□ 1.1
HOXC9-201ENST00000303450 RAP2AP10114 183 aa21.93■■□□□ 1.1
HOXC9-201ENST00000303450 IMPDH2P12268 514 aa21.93■■□□□ 1.1
HOXC9-201ENST00000303450 RPS5P46782 204 aaKnown RBP21.93■■□□□ 1.1
HOXC9-201ENST00000303450 SLC35A1P78382 337 aa21.93■■□□□ 1.1
HOXC9-201ENST00000303450 PMPCAQ10713 525 aa21.93■■□□□ 1.1
HOXC9-201ENST00000303450 PIWIL3Q7Z3Z3 882 aaKnown RBP21.93■■□□□ 1.1
HOXC9-201ENST00000303450 ZHX1-C8orf76Q96EF9 292 aa21.93■■□□□ 1.1
HOXC9-201ENST00000303450 RSRC1Q96IZ7 334 aaKnown RBP21.93■■□□□ 1.1
HOXC9-201ENST00000303450 SLC5A6Q9Y289 635 aa21.93■■□□□ 1.1
HOXC9-201ENST00000303450 TRAV36DV7A0A075B6V5 113 aa21.92■■□□□ 1.1
HOXC9-201ENST00000303450 OR2T1O43869 369 aa21.92■■□□□ 1.1
HOXC9-201ENST00000303450 TGM6O95932 706 aa21.92■■□□□ 1.1
HOXC9-201ENST00000303450 MT-ND1P03886 318 aa21.92■■□□□ 1.1
HOXC9-201ENST00000303450 H1F0P07305 194 aaKnown RBP21.92■■□□□ 1.1
HOXC9-201ENST00000303450 FCGR2AP12318 317 aa21.92■■□□□ 1.1
HOXC9-201ENST00000303450 HOXB6P17509 224 aaKnown RBP21.92■■□□□ 1.1
HOXC9-201ENST00000303450 ENPP1P22413 925 aa21.92■■□□□ 1.1
HOXC9-201ENST00000303450 RBM34P42696 430 aaKnown RBP21.92■■□□□ 1.1
HOXC9-201ENST00000303450 MAGEA2P43356 314 aa21.92■■□□□ 1.1
HOXC9-201ENST00000303450 NUP107P57740 925 aa21.92■■□□□ 1.1
HOXC9-201ENST00000303450 OR7A5Q15622 319 aa21.92■■□□□ 1.1
HOXC9-201ENST00000303450 ZNF239Q16600 458 aaKnown RBP21.92■■□□□ 1.1
HOXC9-201ENST00000303450 MTFR2Q6P444 385 aa21.92■■□□□ 1.1
HOXC9-201ENST00000303450 MARVELD2Q8N4S9 558 aa21.92■■□□□ 1.1
HOXC9-201ENST00000303450 PIK3C3Q8NEB9 887 aa21.92■■□□□ 1.1
HOXC9-201ENST00000303450 TMEM255BQ8WV15 326 aa21.92■■□□□ 1.1
HOXC9-201ENST00000303450 HS6ST2Q96MM7 605 aa21.92■■□□□ 1.1
HOXC9-201ENST00000303450 TM9SF2Q99805 663 aa21.92■■□□□ 1.1
HOXC9-201ENST00000303450 ZNF426Q9BUY5 554 aa21.92■■□□□ 1.1
HOXC9-201ENST00000303450 MAN2C1Q9NTJ4 1040 aa21.92■■□□□ 1.1
HOXC9-201ENST00000303450 KIAA1549Q9HCM3 1950 aa21.92■■□□□ 1.1
HOXC9-201ENST00000303450 DIDO1Q9BTC0 2240 aaKnown RBP21.91■■□□□ 1.1
HOXC9-201ENST00000303450 MBD3L4A6NDZ8 208 aaPredicted RBP21.91■■□□□ 1.1
HOXC9-201ENST00000303450 MBD3L3A6NE82 208 aaPredicted RBP21.91■■□□□ 1.1
HOXC9-201ENST00000303450 MBD3L5A6NJ08 208 aaPredicted RBP21.91■■□□□ 1.1
HOXC9-201ENST00000303450 LIPT2A6NK58 231 aa21.91■■□□□ 1.1
HOXC9-201ENST00000303450 KPNA4O00629 521 aaPredicted RBP21.91■■□□□ 1.1
HOXC9-201ENST00000303450 DNPH1O43598 174 aa21.91■■□□□ 1.1
HOXC9-201ENST00000303450 FPR1P21462 350 aa21.91■■□□□ 1.1
HOXC9-201ENST00000303450 FAM69AQ5T7M9 428 aa21.91■■□□□ 1.1
HOXC9-201ENST00000303450 SEM1Q6ZVN7 128 aa21.91■■□□□ 1.1
HOXC9-201ENST00000303450 NCCRP1Q6ZVX7 275 aaPredicted RBP21.91■■□□□ 1.1
HOXC9-201ENST00000303450 MBD3L2Q8NHZ7 208 aaPredicted RBP21.91■■□□□ 1.1
HOXC9-201ENST00000303450 TMEM239Q8WW34 195 aa21.91■■□□□ 1.1
HOXC9-201ENST00000303450 ROBO4Q8WZ75 1007 aa21.91■■□□□ 1.1
HOXC9-201ENST00000303450 TAAR8Q969N4 342 aa21.91■■□□□ 1.1
HOXC9-201ENST00000303450 SLC25A36Q96CQ1 311 aa21.91■■□□□ 1.1
HOXC9-201ENST00000303450 PTDSS2Q9BVG9 487 aa21.91■■□□□ 1.1
HOXC9-201ENST00000303450 SLC19A3Q9BZV2 496 aa21.91■■□□□ 1.1
HOXC9-201ENST00000303450 TESMINQ9Y4I5 508 aa21.91■■□□□ 1.1
HOXC9-201ENST00000303450 IL2RAP01589 272 aa21.9■■□□□ 1.1
HOXC9-201ENST00000303450 NQO1P15559 274 aaKnown RBP21.9■■□□□ 1.1
HOXC9-201ENST00000303450 FUT4P22083 530 aa21.9■■□□□ 1.1
HOXC9-201ENST00000303450 TIMP3P35625 211 aa21.9■■□□□ 1.1
HOXC9-201ENST00000303450 PER3P56645 1201 aa21.9■■□□□ 1.1
HOXC9-201ENST00000303450 SMIM11AP58511 58 aa21.9■■□□□ 1.1
HOXC9-201ENST00000303450 SPIBQ01892 262 aa21.9■■□□□ 1.1
HOXC9-201ENST00000303450 C10orf53Q8N6V4 93 aa21.9■■□□□ 1.1
HOXC9-201ENST00000303450 C9orf106Q8NAJ2 232 aa21.9■■□□□ 1.1
HOXC9-201ENST00000303450 MFSD8Q8NHS3 518 aa21.9■■□□□ 1.1
HOXC9-201ENST00000303450 CHID1Q9BWS9 393 aa21.9■■□□□ 1.1
HOXC9-201ENST00000303450 KLHL4Q9C0H6 718 aa21.9■■□□□ 1.1
HOXC9-201ENST00000303450 ANKRD19PQ9H560 264 aa21.9■■□□□ 1.1
HOXC9-201ENST00000303450 PCNX1Q96RV3 2341 aa21.9■■□□□ 1.1
HOXC9-201ENST00000303450 IGHV3-15A0A0B4J1V0 119 aa21.9■■□□□ 1.1
HOXC9-201ENST00000303450 A0A1W2PRQ8 180 aa21.9■■□□□ 1.1
HOXC9-201ENST00000303450 ERICH4A6NGS2 130 aa21.9■■□□□ 1.1
HOXC9-201ENST00000303450 EIF1BO60739 113 aaKnown RBP21.9■■□□□ 1.1
HOXC9-201ENST00000303450 AQP8O94778 261 aa21.9■■□□□ 1.1
HOXC9-201ENST00000303450 GTF2E2P29084 291 aaKnown RBP21.9■■□□□ 1.1
HOXC9-201ENST00000303450 DGCR6Q14129 220 aa21.9■■□□□ 1.1
HOXC9-201ENST00000303450 FGD3Q5JSP0 725 aa21.9■■□□□ 1.1
HOXC9-201ENST00000303450 FCRLAQ7L513 359 aa21.9■■□□□ 1.1
HOXC9-201ENST00000303450 OR52J3Q8NH60 311 aa21.9■■□□□ 1.1
HOXC9-201ENST00000303450 RND1Q92730 232 aa21.9■■□□□ 1.1
HOXC9-201ENST00000303450 CCDC120Q96HB5 630 aa21.9■■□□□ 1.1
HOXC9-201ENST00000303450 DOCK7Q96N67 2140 aa21.9■■□□□ 1.1
HOXC9-201ENST00000303450 NAA11Q9BSU3 229 aaPredicted RBP21.9■■□□□ 1.1
HOXC9-201ENST00000303450 ERRFI1Q9UJM3 462 aaPredicted RBP21.9■■□□□ 1.1
HOXC9-201ENST00000303450 MED31Q9Y3C7 131 aa21.9■■□□□ 1.1
HOXC9-201ENST00000303450 GADD45GO95257 159 aa21.89■■□□□ 1.09
HOXC9-201ENST00000303450 RRM2P31350 389 aa21.89■■□□□ 1.09
HOXC9-201ENST00000303450 AGFG1P52594 562 aaKnown RBP21.89■■□□□ 1.09
HOXC9-201ENST00000303450 UGT2B15P54855 530 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms