RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 STEAP1Q9UHE8 339 aa7.14□□□□□ -1.27
SF3B3-201ENST00000302516 CBLCQ9ULV8 474 aa7.14□□□□□ -1.27
SF3B3-201ENST00000302516 STRCQ7RTU9 1775 aa7.14□□□□□ -1.27
SF3B3-201ENST00000302516 MCM3APO60318 1980 aa7.14□□□□□ -1.27
SF3B3-201ENST00000302516 LOC100289279A0A1B0GTE1 492 aa7.14□□□□□ -1.27
SF3B3-201ENST00000302516 A0A1W2PQU0 124 aa7.14□□□□□ -1.27
SF3B3-201ENST00000302516 ANTXRLA6NF34 631 aa7.14□□□□□ -1.27
SF3B3-201ENST00000302516 C1orf105O95561 183 aa7.14□□□□□ -1.27
SF3B3-201ENST00000302516 B3GLCTQ6Y288 498 aa7.14□□□□□ -1.27
SF3B3-201ENST00000302516 ZNF765Q7L2R6 523 aa7.14□□□□□ -1.27
SF3B3-201ENST00000302516 CPXM2Q8N436 756 aa7.14□□□□□ -1.27
SF3B3-201ENST00000302516 KHSRPQ92945 711 aaKnown RBP eCLIP7.14□□□□□ -1.276e-7■■■□□ 19
SF3B3-201ENST00000302516 ZCCHC4Q9H5U6 513 aa7.14□□□□□ -1.27
SF3B3-201ENST00000302516 RCE1Q9Y256 329 aa7.14□□□□□ -1.27
SF3B3-201ENST00000302516 NHSQ6T4R5 1651 aa7.14□□□□□ -1.27
SF3B3-201ENST00000302516 RFXAPO00287 272 aa7.14□□□□□ -1.27
SF3B3-201ENST00000302516 TAAR5O14804 337 aa7.14□□□□□ -1.27
SF3B3-201ENST00000302516 MPPED1O15442 326 aa7.14□□□□□ -1.27
SF3B3-201ENST00000302516 NUDT21O43809 227 aaKnown RBP7.14□□□□□ -1.27
SF3B3-201ENST00000302516 SNAI1O95863 264 aaPredicted RBP7.14□□□□□ -1.27
SF3B3-201ENST00000302516 HIST1H1TP22492 207 aaPredicted RBP7.14□□□□□ -1.27
SF3B3-201ENST00000302516 HTR2CP28335 458 aa7.14□□□□□ -1.27
SF3B3-201ENST00000302516 RFX2P48378 723 aa7.14□□□□□ -1.27
SF3B3-201ENST00000302516 SPOCK1Q08629 439 aa7.14□□□□□ -1.27
SF3B3-201ENST00000302516 SOHLH1Q5JUK2 328 aa7.14□□□□□ -1.27
SF3B3-201ENST00000302516 CTSL3PQ5NE16 218 aa7.14□□□□□ -1.27
SF3B3-201ENST00000302516 PLCXD3Q63HM9 321 aa7.14□□□□□ -1.27
SF3B3-201ENST00000302516 FRMPD2BQ6IN97 320 aa7.14□□□□□ -1.27
SF3B3-201ENST00000302516 PXYLP1Q8TE99 480 aa7.14□□□□□ -1.27
SF3B3-201ENST00000302516 SLC41A2Q96JW4 573 aa7.14□□□□□ -1.27
SF3B3-201ENST00000302516 C10orf90Q96M02 699 aa7.14□□□□□ -1.27
SF3B3-201ENST00000302516 SMG9Q9H0W8 520 aaKnown RBP7.14□□□□□ -1.27
SF3B3-201ENST00000302516 EGLN3Q9H6Z9 239 aa7.14□□□□□ -1.27
SF3B3-201ENST00000302516 GNG13Q9P2W3 67 aa7.14□□□□□ -1.27
SF3B3-201ENST00000302516 KLF15Q9UIH9 416 aa7.14□□□□□ -1.27
SF3B3-201ENST00000302516 A8MVM7 634 aa7.14□□□□□ -1.27
SF3B3-201ENST00000302516 FAM155AB1AL88 458 aaPredicted RBP7.14□□□□□ -1.27
SF3B3-201ENST00000302516 SORBS2O94875 1100 aaKnown RBP7.14□□□□□ -1.27
SF3B3-201ENST00000302516 PROS1P07225 676 aa7.14□□□□□ -1.27
SF3B3-201ENST00000302516 ADRA1AP35348 466 aa7.14□□□□□ -1.27
SF3B3-201ENST00000302516 GPLD1P80108 840 aa7.14□□□□□ -1.27
SF3B3-201ENST00000302516 FLI1Q01543 452 aaPredicted RBP7.14□□□□□ -1.27
SF3B3-201ENST00000302516 TGFBR3Q03167 851 aa7.14□□□□□ -1.27
SF3B3-201ENST00000302516 HIST2H3PS2Q5TEC6 136 aa7.14□□□□□ -1.27
SF3B3-201ENST00000302516 SLC46A3Q7Z3Q1 461 aa7.14□□□□□ -1.27
SF3B3-201ENST00000302516 ACOT4Q8N9L9 421 aa7.14□□□□□ -1.27
SF3B3-201ENST00000302516 TMEM102Q8N9M5 508 aaPredicted RBP7.14□□□□□ -1.27
SF3B3-201ENST00000302516 PEX11GQ96HA9 241 aa7.14□□□□□ -1.27
SF3B3-201ENST00000302516 ATOH8Q96SQ7 321 aa7.14□□□□□ -1.27
SF3B3-201ENST00000302516 BOCQ9BWV1 1114 aa7.14□□□□□ -1.27
SF3B3-201ENST00000302516 MCTS1Q9ULC4 181 aaKnown RBP7.14□□□□□ -1.27
SF3B3-201ENST00000302516 PRRC2BQ5JSZ5 2229 aaKnown RBP7.14□□□□□ -1.27
SF3B3-201ENST00000302516 PIKFYVEQ9Y2I7 2098 aa7.14□□□□□ -1.27
SF3B3-201ENST00000302516 RPS10-NUDT3A0A1W2PQS6 291 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 DCDC2BA2VCK2 349 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 C17orf105B2RV13 164 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 PPP1R2P9O14990 202 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 TXNL1O43396 289 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 ZDHHC11BP0C7U3 371 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 RPS10P46783 165 aaKnown RBP7.13□□□□□ -1.27
SF3B3-201ENST00000302516 FOXA1P55317 472 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 HHEXQ03014 270 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 C18orf21Q32NC0 220 aaPredicted RBP7.13□□□□□ -1.27
SF3B3-201ENST00000302516 TMEM41BQ5BJD5 291 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 C1orf87Q8N0U7 546 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 BPIFB2Q8N4F0 458 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 OR5T1Q8NG75 326 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 LPAR4Q99677 370 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 SLC25A32Q9H2D1 315 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 IL17CQ9P0M4 197 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 TMEM129A0AVI4 362 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 ARRDC5A6NEK1 342 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 C1QBP02746 253 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 ALDOCP09972 364 aaKnown RBP7.13□□□□□ -1.27
SF3B3-201ENST00000302516 SSTR2P30874 369 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 GDNFP39905 211 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 SLC1A3P43003 542 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 GLYR1Q49A26 553 aaPredicted RBP7.13□□□□□ -1.27
SF3B3-201ENST00000302516 EXOSC6Q5RKV6 272 aaKnown RBP7.13□□□□□ -1.27
SF3B3-201ENST00000302516 TMPRSS7Q7RTY8 843 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 SERPINA12Q8IW75 414 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 OR5K2Q8NHB8 316 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 BRI3BPQ8WY22 251 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 DTD2Q96FN9 168 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 AMDHD1Q96NU7 426 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 PCDHGA5Q9Y5G8 931 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 RAB11AP62491 216 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 MFSD9Q8NBP5 474 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 CDS1Q92903 461 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 OR5B2Q96R09 309 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 OR7D2Q96RA2 312 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 LYSMD1Q96S90 227 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 CDCA3Q99618 268 aaPredicted RBP7.13□□□□□ -1.27
SF3B3-201ENST00000302516 NDUFB11Q9NX14 153 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 SIDT1Q9NXL6 827 aaKnown RBP7.13□□□□□ -1.27
SF3B3-201ENST00000302516 GDE1Q9NZC3 331 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 TMEM189-UBE2V1I3L0A0 370 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 LCATP04180 440 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 SIRPAP78324 504 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 CATR1Q13166 79 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms