RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 C18orf63Q68DL7 685 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 TSSK4Q6SA08 328 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 ALG12Q9BV10 488 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 NIPAL2Q9H841 368 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 PRDM9Q9NQV7 894 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 SLX4Q8IY92 1834 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 TRIM64CA6NLI5 447 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 B4DXG7 233 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 ARPC5O15511 151 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 SCRG1O75711 98 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 ZNF14P17017 642 aaPredicted RBP11.88□□□□□ -0.51
PTCD1-201ENST00000292478 PTBP1P26599 531 aaKnown RBP eCLIP11.88□□□□□ -0.51
PTCD1-201ENST00000292478 EFNA3P52797 238 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 TAS2R46P59540 309 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 SLC35A1P78382 337 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 BLOC1S1P78537 153 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 FGFBP1Q14512 234 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 COX20Q5RI15 118 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 OR2G6Q5TZ20 316 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 FAM111BQ6SJ93 734 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 GDF7Q7Z4P5 450 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 OR56B4Q8NH76 319 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 MRPL38Q96DV4 380 aaKnown RBP11.88□□□□□ -0.51
PTCD1-201ENST00000292478 KATNB1Q9BVA0 655 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 ST6GALNAC5Q9BVH7 336 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 AMBRA1Q9C0C7 1298 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 MFFQ9GZY8 342 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 GABARAPL1Q9H0R8 117 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 WDR76Q9H967 626 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 A0A0A6YYH2 397 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 A6NJ64 397 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 FZD7O75084 574 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 GAAP10253 952 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 PIPP12273 146 aaPredicted RBP11.88□□□□□ -0.51
PTCD1-201ENST00000292478 DCDP81605 110 aaKnown RBP11.88□□□□□ -0.51
PTCD1-201ENST00000292478 HTRA3P83110 453 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 KLHDC8BQ8IXV7 354 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 FRMD1Q8N878 549 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 ZBTB8AQ96BR9 441 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 GON7Q9BXV9 100 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 ULBP2Q9BZM5 246 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 C1orf198Q9H425 327 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 GLTPQ9NZD2 209 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 EPHA4P54764 986 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 YOD1Q5VVQ6 348 aaPredicted RBP11.88□□□□□ -0.51
PTCD1-201ENST00000292478 SAXO2Q658L1 398 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 FAM83FQ8NEG4 500 aaPredicted RBP11.88□□□□□ -0.51
PTCD1-201ENST00000292478 TNFRSF13CQ96RJ3 184 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 CA5BQ9Y2D0 317 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 TPT1P13693 172 aaKnown RBP11.87□□□□□ -0.51
PTCD1-201ENST00000292478 PRKACBP22694 351 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 SSTR4P31391 388 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 OR1D4P47884 311 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 ARG2P78540 354 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 FOXK2Q01167 660 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 DHRS4L2Q6PKH6 230 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 WDR88Q6ZMY6 472 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 Q6ZPB1 254 aaPredicted RBP11.87□□□□□ -0.51
PTCD1-201ENST00000292478 MKXQ8IYA7 352 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 OR6V1Q8N148 313 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 ZNF740Q8NDX6 193 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 TBC1D15Q8TC07 691 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 CNTNAP3BQ96NU0 1288 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 TXNL4BQ9NX01 149 aaKnown RBP11.87□□□□□ -0.51
PTCD1-201ENST00000292478 HEMK1Q9Y5R4 338 aaPredicted RBP11.87□□□□□ -0.51
PTCD1-201ENST00000292478 ETV7Q9Y603 341 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 TRDV1A0A1B0GX56 115 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 RAD1O60671 282 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 UTS2O95399 124 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 CNOT4O95628 575 aaKnown RBP11.87□□□□□ -0.51
PTCD1-201ENST00000292478 TSPAN15O95858 294 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 SERPINE2P07093 398 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 GIFP27352 417 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 NKX2-5P52952 324 aaPredicted RBP11.87□□□□□ -0.51
PTCD1-201ENST00000292478 RAP2BP61225 183 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 SNRPD2P62316 118 aaKnown RBP11.87□□□□□ -0.51
PTCD1-201ENST00000292478 EEF1A2Q05639 463 aaKnown RBP11.87□□□□□ -0.51
PTCD1-201ENST00000292478 DUSP7Q16829 419 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 Q499Y3 187 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 LILRB2Q8N423 598 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 GLYATL2Q8WU03 294 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 TOMM40LQ969M1 308 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 RHBDD3Q9Y3P4 386 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 ARAP2Q8WZ64 1704 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 LOXHD1Q8IVV2 1947 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 A0A1B0GWA3 101 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 CTDSP2O14595 271 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 ERVK-16P61578 105 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 CXADRP78310 365 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 RAB31Q13636 194 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 ERV3-1Q14264 604 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 DNAAF1Q8NEP3 725 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 RSC1A1Q92681 617 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 ZNF566Q969W8 418 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 ARL5BQ96KC2 179 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 VN1R3Q9BXE9 311 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 DUSP22Q9NRW4 184 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 PRELID1Q9Y255 219 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 EIF1P41567 113 aaKnown RBP11.87□□□□□ -0.51
PTCD1-201ENST00000292478 AFF3P51826 1226 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms