RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 ASGR2P07307 311 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 CPN1P15169 458 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 KIAA1024LP59773 190 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 RPE65Q16518 533 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 MAPK14Q16539 360 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 ZNF613Q6PF04 617 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 FAM111BQ6SJ93 734 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 USP53Q70EK8 1073 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 GRASPQ7Z6J2 395 aaPredicted RBP9.57□□□□□ -0.88
SKA1-201ENST00000285116 HMGN2P46Q86SG4 172 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 SYS1Q8N2H4 156 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 OR7G2Q8NG99 324 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 TMEM239Q8WW34 195 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 SDF2Q99470 211 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 TEAD3Q99594 435 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 PHPT1Q9NRX4 125 aaPredicted RBP9.57□□□□□ -0.88
SKA1-201ENST00000285116 HPF1Q9NWY4 346 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 CA5BQ9Y2D0 317 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 EP300Q09472 2414 aaPredicted RBP9.57□□□□□ -0.88
SKA1-201ENST00000285116 GPR179Q6PRD1 2367 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 LINC01553A4QN01 128 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 ZNF98A6NK75 572 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 PRR23D1E9PI22 279 aaPredicted RBP9.57□□□□□ -0.88
SKA1-201ENST00000285116 GATBO75879 557 aaKnown RBP9.57□□□□□ -0.88
SKA1-201ENST00000285116 NTN1O95631 604 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 FCER2P06734 321 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 SBK2P0C263 348 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 PRR23D2P0DMB1 279 aaPredicted RBP9.57□□□□□ -0.88
SKA1-201ENST00000285116 NID1P14543 1247 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 POU3F2P20265 443 aaPredicted RBP9.57□□□□□ -0.88
SKA1-201ENST00000285116 PSMB1P20618 241 aaKnown RBP9.57□□□□□ -0.88
SKA1-201ENST00000285116 HTR2AP28223 471 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 MAP3K8P41279 467 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 ZNF85Q03923 595 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 ENPP2Q13822 863 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 HLXQ14774 488 aaPredicted RBP9.57□□□□□ -0.88
SKA1-201ENST00000285116 SLC25A35Q3KQZ1 300 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 OVCH1Q7RTY7 1134 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 CEACAM19Q7Z692 300 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 SLC16A11Q8NCK7 471 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 OR11G2Q8NGC1 345 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 RPS4Y2Q8TD47 263 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 SMIM4Q8WVI0 70 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 SUSD6Q92537 303 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 CDS1Q92903 461 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 FAM131CQ96AQ9 280 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 TM4SF19Q96DZ7 209 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 ART5Q96L15 291 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 DUSP22Q9NRW4 184 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 CLDND1Q9NY35 253 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 OBP2AQ9NY56 170 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 ST6GALNAC2Q9UJ37 374 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 C19orf53Q9UNZ5 99 aaPredicted RBP9.57□□□□□ -0.88
SKA1-201ENST00000285116 SIGLEC7Q9Y286 467 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 NTNG1Q9Y2I2 539 aa9.57□□□□□ -0.88
SKA1-201ENST00000285116 A0A1W2PS29 197 aa9.56□□□□□ -0.88
SKA1-201ENST00000285116 DNASE2O00115 360 aaPredicted RBP9.56□□□□□ -0.88
SKA1-201ENST00000285116 GALR3O60755 368 aaPredicted RBP9.56□□□□□ -0.88
SKA1-201ENST00000285116 NAT2P11245 290 aa9.56□□□□□ -0.88
SKA1-201ENST00000285116 BMP7P18075 431 aa9.56□□□□□ -0.88
SKA1-201ENST00000285116 MAKP20794 623 aa9.56□□□□□ -0.88
SKA1-201ENST00000285116 NDUFS1P28331 727 aa9.56□□□□□ -0.88
SKA1-201ENST00000285116 S100A11P31949 105 aa9.56□□□□□ -0.88
SKA1-201ENST00000285116 RBM34P42696 430 aaKnown RBP9.56□□□□□ -0.88
SKA1-201ENST00000285116 DLX2Q07687 328 aaPredicted RBP9.56□□□□□ -0.88
SKA1-201ENST00000285116 IRF4Q15306 451 aa9.56□□□□□ -0.88
SKA1-201ENST00000285116 GPR68Q15743 365 aa9.56□□□□□ -0.88
SKA1-201ENST00000285116 FAM27D1Q5T7N8 215 aa9.56□□□□□ -0.88
SKA1-201ENST00000285116 ARL9Q6T311 187 aa9.56□□□□□ -0.88
SKA1-201ENST00000285116 ALKAL2Q6UX46 152 aa9.56□□□□□ -0.88
SKA1-201ENST00000285116 PDZD9Q8IXQ8 264 aa9.56□□□□□ -0.88
SKA1-201ENST00000285116 OR6V1Q8N148 313 aa9.56□□□□□ -0.88
SKA1-201ENST00000285116 EID2Q8N6I1 236 aa9.56□□□□□ -0.88
SKA1-201ENST00000285116 CNOT9Q92600 299 aaKnown RBP9.56□□□□□ -0.88
SKA1-201ENST00000285116 ATOH1Q92858 354 aaPredicted RBP9.56□□□□□ -0.88
SKA1-201ENST00000285116 SERINC2Q96SA4 455 aa9.56□□□□□ -0.88
SKA1-201ENST00000285116 ZNF426Q9BUY5 554 aa9.56□□□□□ -0.88
SKA1-201ENST00000285116 GSDMCQ9BYG8 508 aa9.56□□□□□ -0.88
SKA1-201ENST00000285116 KLHL1Q9NR64 748 aa9.56□□□□□ -0.88
SKA1-201ENST00000285116 AKAP7Q9P0M2 348 aaPredicted RBP9.56□□□□□ -0.88
SKA1-201ENST00000285116 SERTAD3Q9UJW9 196 aa9.56□□□□□ -0.88
SKA1-201ENST00000285116 FBXL2Q9UKC9 423 aa9.56□□□□□ -0.88
SKA1-201ENST00000285116 TCRBV16S1A1N1A0A5B0 115 aa9.56□□□□□ -0.88
SKA1-201ENST00000285116 CDHR4A6H8M9 788 aa9.56□□□□□ -0.88
SKA1-201ENST00000285116 NAP1L6A6NFF2 107 aa9.56□□□□□ -0.88
SKA1-201ENST00000285116 MID1O15344 667 aa9.56□□□□□ -0.88
SKA1-201ENST00000285116 SELENOFO60613 162 aa9.56□□□□□ -0.88
SKA1-201ENST00000285116 SNRNP200O75643 2136 aaKnown RBP9.56□□□□□ -0.88
SKA1-201ENST00000285116 UCHL1P09936 223 aa9.56□□□□□ -0.88
SKA1-201ENST00000285116 IFNGR1P15260 489 aa9.56□□□□□ -0.88
SKA1-201ENST00000285116 RAB3BP20337 219 aa9.56□□□□□ -0.88
SKA1-201ENST00000285116 GDNFP39905 211 aa9.56□□□□□ -0.88
SKA1-201ENST00000285116 VIPR2P41587 438 aa9.56□□□□□ -0.88
SKA1-201ENST00000285116 VEGFCP49767 419 aa9.56□□□□□ -0.88
SKA1-201ENST00000285116 CCR9P51686 369 aa9.56□□□□□ -0.88
SKA1-201ENST00000285116 MAZP56270 477 aaKnown RBP9.56□□□□□ -0.88
SKA1-201ENST00000285116 S100A12P80511 92 aa9.56□□□□□ -0.88
SKA1-201ENST00000285116 HTR4Q13639 388 aa9.56□□□□□ -0.88
SKA1-201ENST00000285116 NUMA1Q14980 2115 aa9.56□□□□□ -0.88
SKA1-201ENST00000285116 TCEA2Q15560 299 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms