RNA–Protein interactions for RNA: ENST00000272322.8

VPS54-201, Transcript of VPS54, GARP complex subunit, humanhuman

APPRIS P3 TSL 5 BASIC

Gene VPS54, Length 3,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-201ENST00000272322 FBXO45P0C2W1 286 aa15.26■□□□□ 0.03
VPS54-201ENST00000272322 AHCYP23526 432 aa15.26■□□□□ 0.03
VPS54-201ENST00000272322 LTBRP36941 435 aa15.26■□□□□ 0.03
VPS54-201ENST00000272322 GDI2P50395 445 aaKnown RBP15.26■□□□□ 0.03
VPS54-201ENST00000272322 CD226Q15762 336 aa15.26■□□□□ 0.03
VPS54-201ENST00000272322 SMAD2Q15796 467 aaKnown RBP15.26■□□□□ 0.03
VPS54-201ENST00000272322 FAM205BPQ63HN1 556 aa15.26■□□□□ 0.03
VPS54-201ENST00000272322 LEG1Q6P5S2 330 aa15.26■□□□□ 0.03
VPS54-201ENST00000272322 NOXA1Q86UR1 476 aa15.26■□□□□ 0.03
VPS54-201ENST00000272322 MOGAT1Q96PD6 335 aa15.26■□□□□ 0.03
VPS54-201ENST00000272322 ANKRD19PQ9H560 264 aa15.26■□□□□ 0.03
VPS54-201ENST00000272322 UCKL1Q9NWZ5 548 aa15.26■□□□□ 0.03
VPS54-201ENST00000272322 IKZF2Q9UKS7 526 aa15.26■□□□□ 0.03
VPS54-201ENST00000272322 TNFSF14O43557 240 aa15.26■□□□□ 0.03
VPS54-201ENST00000272322 FZD7O75084 574 aa15.26■□□□□ 0.03
VPS54-201ENST00000272322 WISP1O95388 367 aa15.26■□□□□ 0.03
VPS54-201ENST00000272322 MT-ND4P03905 459 aa15.26■□□□□ 0.03
VPS54-201ENST00000272322 POU2F2P09086 479 aa15.26■□□□□ 0.03
VPS54-201ENST00000272322 ATF1P18846 271 aa15.26■□□□□ 0.03
VPS54-201ENST00000272322 PON3Q15166 354 aa15.26■□□□□ 0.03
VPS54-201ENST00000272322 C1QL3Q5VWW1 255 aa15.26■□□□□ 0.03
VPS54-201ENST00000272322 MED25Q71SY5 747 aa15.26■□□□□ 0.03
VPS54-201ENST00000272322 KDM8Q8N371 416 aa15.26■□□□□ 0.03
VPS54-201ENST00000272322 C19orf47Q8N9M1 422 aaKnown RBP15.26■□□□□ 0.03
VPS54-201ENST00000272322 ZNF563Q8TA94 476 aa15.26■□□□□ 0.03
VPS54-201ENST00000272322 LRRC61Q9BV99 259 aa15.26■□□□□ 0.03
VPS54-201ENST00000272322 ULBP3Q9BZM4 244 aa15.26■□□□□ 0.03
VPS54-201ENST00000272322 PRRC2CQ9Y520 2896 aaKnown RBP15.26■□□□□ 0.03
VPS54-201ENST00000272322 FOXS1O43638 330 aa15.26■□□□□ 0.03
VPS54-201ENST00000272322 OR8G3PP0DMU2 310 aa15.26■□□□□ 0.03
VPS54-201ENST00000272322 GIFP27352 417 aa15.26■□□□□ 0.03
VPS54-201ENST00000272322 SLC6A6P31641 620 aa15.26■□□□□ 0.03
VPS54-201ENST00000272322 RNLSQ5VYX0 342 aa15.26■□□□□ 0.03
VPS54-201ENST00000272322 PELI1Q96FA3 418 aa15.26■□□□□ 0.03
VPS54-201ENST00000272322 OR10A5Q9H207 317 aa15.26■□□□□ 0.03
VPS54-201ENST00000272322 MKKSQ9NPJ1 570 aaPredicted RBP15.26■□□□□ 0.03
VPS54-201ENST00000272322 PCOLCE2Q9UKZ9 415 aa15.26■□□□□ 0.03
VPS54-201ENST00000272322 CA14Q9ULX7 337 aa15.26■□□□□ 0.03
VPS54-201ENST00000272322 CACNA1EQ15878 2313 aa15.26■□□□□ 0.03
VPS54-201ENST00000272322 IGHV5-51A0A0C4DH38 117 aa15.25■□□□□ 0.03
VPS54-201ENST00000272322 SPTY2D1-AS1A0A0U1RR47 76 aa15.25■□□□□ 0.03
VPS54-201ENST00000272322 CHP2O43745 196 aa15.25■□□□□ 0.03
VPS54-201ENST00000272322 SLC35E2P0CK97 266 aa15.25■□□□□ 0.03
VPS54-201ENST00000272322 RAB3BP20337 219 aa15.25■□□□□ 0.03
VPS54-201ENST00000272322 AUNIPQ9H7T9 357 aa15.25■□□□□ 0.03
VPS54-201ENST00000272322 LYRM4Q9HD34 91 aa15.25■□□□□ 0.03
VPS54-201ENST00000272322 TMEM72A0PK05 275 aa15.25■□□□□ 0.03
VPS54-201ENST00000272322 RNH1P13489 461 aaKnown RBP15.25■□□□□ 0.03
VPS54-201ENST00000272322 ARSBP15848 533 aa15.25■□□□□ 0.03
VPS54-201ENST00000272322 S1PR1P21453 382 aa15.25■□□□□ 0.03
VPS54-201ENST00000272322 RAB38P57729 211 aa15.25■□□□□ 0.03
VPS54-201ENST00000272322 SQSTM1Q13501 440 aa15.25■□□□□ 0.03
VPS54-201ENST00000272322 VWA2Q5GFL6 755 aa15.25■□□□□ 0.03
VPS54-201ENST00000272322 RFT1Q96AA3 541 aa15.25■□□□□ 0.03
VPS54-201ENST00000272322 SGTBQ96EQ0 304 aa15.25■□□□□ 0.03
VPS54-201ENST00000272322 POT1Q9NUX5 634 aa15.25■□□□□ 0.03
VPS54-201ENST00000272322 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.25■□□□□ 0.03
VPS54-201ENST00000272322 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.25■□□□□ 0.03
VPS54-201ENST00000272322 ELOA3DA6NLF2 546 aaPredicted RBP15.25■□□□□ 0.03
VPS54-201ENST00000272322 C17orf105B2RV13 164 aa15.25■□□□□ 0.03
VPS54-201ENST00000272322 PRAMEF26H0Y7S4 382 aa15.25■□□□□ 0.03
VPS54-201ENST00000272322 DCTN6O00399 190 aa15.25■□□□□ 0.03
VPS54-201ENST00000272322 IFNGP01579 166 aa15.25■□□□□ 0.03
VPS54-201ENST00000272322 CT45A8P0DMV1 189 aa15.25■□□□□ 0.03
VPS54-201ENST00000272322 CT45A9P0DMV2 189 aa15.25■□□□□ 0.03
VPS54-201ENST00000272322 DDOSTP39656 456 aa15.25■□□□□ 0.03
VPS54-201ENST00000272322 NTRK2Q16620 822 aa15.25■□□□□ 0.03
VPS54-201ENST00000272322 ELOA3BQ3SY89 546 aa15.25■□□□□ 0.03
VPS54-201ENST00000272322 CT45A2Q5DJT8 189 aa15.25■□□□□ 0.03
VPS54-201ENST00000272322 APOOLQ6UXV4 268 aa15.25■□□□□ 0.03
VPS54-201ENST00000272322 TMPRSS11FQ6ZWK6 438 aa15.25■□□□□ 0.03
VPS54-201ENST00000272322 BCORP1Q8N888 145 aa15.25■□□□□ 0.03
VPS54-201ENST00000272322 ELOA3Q8NG57 546 aa15.25■□□□□ 0.03
VPS54-201ENST00000272322 OR6C4Q8NGE1 309 aa15.25■□□□□ 0.03
VPS54-201ENST00000272322 OR51Q1Q8NH59 317 aa15.25■□□□□ 0.03
VPS54-201ENST00000272322 MED17Q9NVC6 651 aa15.25■□□□□ 0.03
VPS54-201ENST00000272322 NCOR1O75376 2440 aa15.24■□□□□ 0.03
VPS54-201ENST00000272322 FAM47E-STBD1D6RA91 191 aa15.24■□□□□ 0.03
VPS54-201ENST00000272322 CLDN4O14493 209 aa15.24■□□□□ 0.03
VPS54-201ENST00000272322 HLA-DQA2P01906 255 aa15.24■□□□□ 0.03
VPS54-201ENST00000272322 DRD1P21728 446 aa15.24■□□□□ 0.03
VPS54-201ENST00000272322 BTBD16Q32M84 506 aa15.24■□□□□ 0.03
VPS54-201ENST00000272322 LYPD8Q6UX82 237 aa15.24■□□□□ 0.03
VPS54-201ENST00000272322 MED18Q9BUE0 208 aa15.24■□□□□ 0.03
VPS54-201ENST00000272322 IGHV3-20A0A0C4DH32 117 aa15.24■□□□□ 0.03
VPS54-201ENST00000272322 PTP4A3O75365 173 aa15.24■□□□□ 0.03
VPS54-201ENST00000272322 NKX2-2O95096 273 aa15.24■□□□□ 0.03
VPS54-201ENST00000272322 F8A1P23610 371 aa15.24■□□□□ 0.03
VPS54-201ENST00000272322 RABIFP47224 123 aa15.24■□□□□ 0.03
VPS54-201ENST00000272322 UBE2IP63279 158 aaKnown RBP15.24■□□□□ 0.03
VPS54-201ENST00000272322 GPBAR1Q8TDU6 330 aa15.24■□□□□ 0.03
VPS54-201ENST00000272322 NOX4Q9NPH5 578 aa15.24■□□□□ 0.03
VPS54-201ENST00000272322 MYEF2Q9P2K5 600 aaKnown RBP15.24■□□□□ 0.03
VPS54-201ENST00000272322 TEKT2Q9UIF3 430 aa15.24■□□□□ 0.03
VPS54-201ENST00000272322 NDUFB2O95178 105 aa15.23■□□□□ 0.03
VPS54-201ENST00000272322 MLLT3P42568 568 aaPredicted RBP15.23■□□□□ 0.03
VPS54-201ENST00000272322 PITPNBP48739 271 aa15.23■□□□□ 0.03
VPS54-201ENST00000272322 ZP2Q05996 745 aa15.23■□□□□ 0.03
VPS54-201ENST00000272322 HBMQ6B0K9 141 aa15.23■□□□□ 0.03
VPS54-201ENST00000272322 LINGO2Q7L985 606 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms