RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 FIGNL1Q6PIW4 674 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 GAREM2Q75VX8 874 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 TGIF2LXQ8IUE1 241 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 SLC43A2Q8N370 569 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 ADGRE3Q9BY15 652 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 SLC38A1Q9H2H9 487 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 UNKLQ9H9P5 680 aaKnown RBP8.1□□□□□ -1.11
VAPB-201ENST00000265619 RNF122Q9H9V4 155 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 PDFQ9HBH1 243 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 VPS29Q9UBQ0 182 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 CLEC4EQ9ULY5 219 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 CARHSP1Q9Y2V2 147 aaKnown RBP8.1□□□□□ -1.11
VAPB-201ENST00000265619 PCDHB1Q9Y5F3 818 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 FRMPD3Q5JV73 1810 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 PLXNA3P51805 1871 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 C17orf113A0A1B0GUU1 675 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 KDM4EB2RXH2 506 aaPredicted RBP8.1□□□□□ -1.11
VAPB-201ENST00000265619 KPNA3O00505 521 aaPredicted RBP8.1□□□□□ -1.11
VAPB-201ENST00000265619 PRAF2O60831 178 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 ARAFP10398 606 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 NR2C1P13056 603 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 NME1P15531 152 aaKnown RBP8.1□□□□□ -1.11
VAPB-201ENST00000265619 HSD3B2P26439 372 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 OR2B8PP59922 312 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 RHOAP61586 193 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 PLA2G7Q13093 441 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 NUMA1Q14980 2115 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 TEAD2Q15562 447 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 ELAVL1Q15717 326 aaKnown RBP8.1□□□□□ -1.11
VAPB-201ENST00000265619 ZNF750Q32MQ0 723 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 GPRC6AQ5T6X5 926 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 ZNF546Q86UE3 836 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 APCDD1Q8J025 514 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 RFLNBQ8N5W9 214 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 OR2AK2Q8NG84 335 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 SLC38A5Q8WUX1 472 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 ZNF471Q9BX82 626 aaPredicted RBP8.1□□□□□ -1.11
VAPB-201ENST00000265619 SUCNR1Q9BXA5 334 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 PIGMQ9H3S5 423 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 CHMP1AQ9HD42 196 aaPredicted RBP8.1□□□□□ -1.11
VAPB-201ENST00000265619 TREM1Q9NP99 234 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 METTL1Q9UBP6 276 aaKnown RBP8.1□□□□□ -1.11
VAPB-201ENST00000265619 LSM7Q9UK45 103 aaKnown RBP8.1□□□□□ -1.11
VAPB-201ENST00000265619 INSL6Q9Y581 213 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 FADS1O60427 444 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 PRAMEF11O60813 436 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 SLC34A2O95436 690 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 EPPINO95925 133 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 GAAP10253 952 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 RPA2P15927 270 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 PBX2P40425 430 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 TSTA3Q13630 321 aaPredicted RBP8.1□□□□□ -1.11
VAPB-201ENST00000265619 SSX2Q16385 188 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 GFOD2Q3B7J2 385 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 LY6G6FQ5SQ64 297 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 ZDHHC20Q5W0Z9 365 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 SSX6Q7RTT6 188 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 OR6V1Q8N148 313 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 ZBTB2Q8N680 514 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 ABHD4Q8TB40 342 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 RGP1Q92546 391 aaPredicted RBP8.1□□□□□ -1.11
VAPB-201ENST00000265619 ZNF354BQ96LW1 612 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 HCAR1Q9BXC0 346 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 REEP4Q9H6H4 257 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 WSB2Q9NYS7 404 aaPredicted RBP8.1□□□□□ -1.11
VAPB-201ENST00000265619 HCFC2Q9Y5Z7 792 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 WNT6Q9Y6F9 365 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 A0A087WV48 116 aa8.09□□□□□ -1.11
VAPB-201ENST00000265619 GNG14A0A1W2PPG7 69 aa8.09□□□□□ -1.11
VAPB-201ENST00000265619 PRAMEF27A3QJZ7 478 aa8.09□□□□□ -1.11
VAPB-201ENST00000265619 C2orf74A8MZ97 194 aa8.09□□□□□ -1.11
VAPB-201ENST00000265619 PGRMC2O15173 223 aa8.09□□□□□ -1.11
VAPB-201ENST00000265619 B4GALT2O60909 372 aa8.09□□□□□ -1.11
VAPB-201ENST00000265619 KHDRBS3O75525 346 aaKnown RBP8.09□□□□□ -1.11
VAPB-201ENST00000265619 KLHL18O94889 574 aa8.09□□□□□ -1.11
VAPB-201ENST00000265619 TMIGD3P0DMS9 266 aaPredicted RBP8.09□□□□□ -1.11
VAPB-201ENST00000265619 MGMTP16455 207 aa8.09□□□□□ -1.11
VAPB-201ENST00000265619 AGAP20933 346 aa8.09□□□□□ -1.11
VAPB-201ENST00000265619 PCP4P48539 62 aa8.09□□□□□ -1.11
VAPB-201ENST00000265619 ANXA11P50995 505 aaKnown RBP8.09□□□□□ -1.11
VAPB-201ENST00000265619 ACSM2AQ08AH3 577 aa8.09□□□□□ -1.11
VAPB-201ENST00000265619 AADACL4Q5VUY2 407 aa8.09□□□□□ -1.11
VAPB-201ENST00000265619 HACD4Q5VWC8 232 aa8.09□□□□□ -1.11
VAPB-201ENST00000265619 ACSM2BQ68CK6 577 aa8.09□□□□□ -1.11
VAPB-201ENST00000265619 NDUFAF7Q7L592 441 aa8.09□□□□□ -1.11
VAPB-201ENST00000265619 MORN4Q8NDC4 146 aa8.09□□□□□ -1.11
VAPB-201ENST00000265619 KLK6Q92876 244 aa8.09□□□□□ -1.11
VAPB-201ENST00000265619 PIGQQ9BRB3 760 aa8.09□□□□□ -1.11
VAPB-201ENST00000265619 ATG101Q9BSB4 218 aa8.09□□□□□ -1.11
VAPB-201ENST00000265619 ALX4Q9H161 411 aaPredicted RBP8.09□□□□□ -1.11
VAPB-201ENST00000265619 TMEM38AQ9H6F2 299 aa8.09□□□□□ -1.11
VAPB-201ENST00000265619 MRPS30Q9NP92 439 aaKnown RBP8.09□□□□□ -1.11
VAPB-201ENST00000265619 DNAJB11Q9UBS4 358 aa8.09□□□□□ -1.11
VAPB-201ENST00000265619 ZMIZ1Q9ULJ6 1067 aa8.09□□□□□ -1.11
VAPB-201ENST00000265619 CAMK2AQ9UQM7 478 aa8.09□□□□□ -1.11
VAPB-201ENST00000265619 WDR87Q6ZQQ6 2873 aa8.09□□□□□ -1.11
VAPB-201ENST00000265619 C5orf58C9J3I9 102 aa8.09□□□□□ -1.11
VAPB-201ENST00000265619 CACNB4O00305 520 aaPredicted RBP8.09□□□□□ -1.11
VAPB-201ENST00000265619 FRS3O43559 492 aa8.09□□□□□ -1.11
VAPB-201ENST00000265619 GSTZ1O43708 216 aaPredicted RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms