RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 SGK2Q9HBY8 427 aa3.84□□□□□ -1.79
TRA2B-201ENST00000259043 B3GAT2Q9NPZ5 323 aa3.84□□□□□ -1.79
TRA2B-201ENST00000259043 PRSS16Q9NQE7 514 aa3.84□□□□□ -1.79
TRA2B-201ENST00000259043 NLGN3Q9NZ94 848 aa3.84□□□□□ -1.79
TRA2B-201ENST00000259043 CGNQ9P2M7 1197 aaKnown RBP3.84□□□□□ -1.79
TRA2B-201ENST00000259043 ATXN10Q9UBB4 475 aa3.84□□□□□ -1.79
TRA2B-201ENST00000259043 CHMP2BQ9UQN3 213 aa3.84□□□□□ -1.79
TRA2B-201ENST00000259043 PCNX1Q96RV3 2341 aa3.84□□□□□ -1.79
TRA2B-201ENST00000259043 NIPBLQ6KC79 2804 aaeCLIP3.84□□□□□ -1.85e-6■□□□□ 10.2
TRA2B-201ENST00000259043 LOC105371242A0A075B767 164 aa3.83□□□□□ -1.8
TRA2B-201ENST00000259043 A0A1B0GWJ7 208 aa3.83□□□□□ -1.8
TRA2B-201ENST00000259043 GOLGA8IPA6NC78 632 aa3.83□□□□□ -1.8
TRA2B-201ENST00000259043 GOLGA8JA6NMD2 632 aa3.83□□□□□ -1.8
TRA2B-201ENST00000259043 ANKRD30BLA7E2S9 258 aa3.83□□□□□ -1.8
TRA2B-201ENST00000259043 SRRM5B3KS81 715 aa3.83□□□□□ -1.8
TRA2B-201ENST00000259043 TSPAN2O60636 221 aa3.83□□□□□ -1.8
TRA2B-201ENST00000259043 ANXA9O76027 345 aa3.83□□□□□ -1.8
TRA2B-201ENST00000259043 FCER2P06734 321 aa3.83□□□□□ -1.8
TRA2B-201ENST00000259043 EDNRAP25101 427 aa3.83□□□□□ -1.8
TRA2B-201ENST00000259043 ZFP36L2P47974 494 aaKnown RBP3.83□□□□□ -1.8
TRA2B-201ENST00000259043 TRPC1P48995 793 aa3.83□□□□□ -1.8
TRA2B-201ENST00000259043 NPY2RP49146 381 aa3.83□□□□□ -1.8
TRA2B-201ENST00000259043 NDST1P52848 882 aa3.83□□□□□ -1.8
TRA2B-201ENST00000259043 HERVK_113P63132 956 aa3.83□□□□□ -1.8
TRA2B-201ENST00000259043 ERVK-8P63133 956 aa3.83□□□□□ -1.8
TRA2B-201ENST00000259043 MYL5Q02045 173 aa3.83□□□□□ -1.8
TRA2B-201ENST00000259043 TGIF1Q15583 401 aa3.83□□□□□ -1.8
TRA2B-201ENST00000259043 HAGHQ16775 308 aa3.83□□□□□ -1.8
TRA2B-201ENST00000259043 ISXQ2M1V0 245 aa3.83□□□□□ -1.8
TRA2B-201ENST00000259043 FILIP1LQ4L180 1135 aa3.83□□□□□ -1.8
TRA2B-201ENST00000259043 LRRC8BQ6P9F7 803 aa3.83□□□□□ -1.8
TRA2B-201ENST00000259043 GOLGA7Q7Z5G4 137 aa3.83□□□□□ -1.8
TRA2B-201ENST00000259043 SCD5Q86SK9 330 aa3.83□□□□□ -1.8
TRA2B-201ENST00000259043 AMZ2Q86W34 360 aa3.83□□□□□ -1.8
TRA2B-201ENST00000259043 ZNF573Q86YE8 665 aa3.83□□□□□ -1.8
TRA2B-201ENST00000259043 LINC00518Q8N0U6 118 aa3.83□□□□□ -1.8
TRA2B-201ENST00000259043 OR10G7Q8NGN6 311 aa3.83□□□□□ -1.8
TRA2B-201ENST00000259043 OR4C6Q8NH72 309 aa3.83□□□□□ -1.8
TRA2B-201ENST00000259043 ZNF564Q8TBZ8 553 aaPredicted RBP3.83□□□□□ -1.8
TRA2B-201ENST00000259043 LIPHQ8WWY8 451 aa3.83□□□□□ -1.8
TRA2B-201ENST00000259043 P3H4Q92791 437 aa3.83□□□□□ -1.8
TRA2B-201ENST00000259043 MRPL24Q96A35 216 aaKnown RBP3.83□□□□□ -1.8
TRA2B-201ENST00000259043 ATXN7L3BQ96GX2 97 aa3.83□□□□□ -1.8
TRA2B-201ENST00000259043 GSDMAQ96QA5 445 aa3.83□□□□□ -1.8
TRA2B-201ENST00000259043 BPIFA3Q9BQP9 254 aa3.83□□□□□ -1.8
TRA2B-201ENST00000259043 NDUFAF3Q9BU61 184 aa3.83□□□□□ -1.8
TRA2B-201ENST00000259043 ZNF416Q9BWM5 594 aa3.83□□□□□ -1.8
TRA2B-201ENST00000259043 ERVK-6Q9BXR3 956 aa3.83□□□□□ -1.8
TRA2B-201ENST00000259043 ELOVL4Q9GZR5 314 aa3.83□□□□□ -1.8
TRA2B-201ENST00000259043 NEUROG2Q9H2A3 272 aa3.83□□□□□ -1.8
TRA2B-201ENST00000259043 BLZF1Q9H2G9 400 aa3.83□□□□□ -1.8
TRA2B-201ENST00000259043 ACTR8Q9H981 624 aa3.83□□□□□ -1.8
TRA2B-201ENST00000259043 GNB4Q9HAV0 340 aa3.83□□□□□ -1.8
TRA2B-201ENST00000259043 FARSBQ9NSD9 589 aaKnown RBP3.83□□□□□ -1.8
TRA2B-201ENST00000259043 CENPMQ9NSP4 180 aa3.83□□□□□ -1.8
TRA2B-201ENST00000259043 LSM7Q9UK45 103 aaKnown RBP3.83□□□□□ -1.8
TRA2B-201ENST00000259043 NAV3Q8IVL0 2385 aa3.83□□□□□ -1.8
TRA2B-201ENST00000259043 CCDC168Q8NDH2 2452 aa3.83□□□□□ -1.8
TRA2B-201ENST00000259043 SPG11Q96JI7 2443 aa3.82□□□□□ -1.8
TRA2B-201ENST00000259043 SDK2Q58EX2 2172 aa3.82□□□□□ -1.8
TRA2B-201ENST00000259043 ESPL1Q14674 2120 aa3.82□□□□□ -1.8
TRA2B-201ENST00000259043 SH3PXD2BA1X283 911 aa3.82□□□□□ -1.8
TRA2B-201ENST00000259043 OR5H15A6NDH6 313 aa3.82□□□□□ -1.8
TRA2B-201ENST00000259043 FAM47DPA6NHR8 397 aa3.82□□□□□ -1.8
TRA2B-201ENST00000259043 PES1O00541 588 aaKnown RBP3.82□□□□□ -1.8
TRA2B-201ENST00000259043 SH2D1BO14796 132 aa3.82□□□□□ -1.8
TRA2B-201ENST00000259043 MAPK13O15264 365 aa3.82□□□□□ -1.8
TRA2B-201ENST00000259043 LATO43561 262 aa3.82□□□□□ -1.8
TRA2B-201ENST00000259043 MFN2O95140 757 aa3.82□□□□□ -1.8
TRA2B-201ENST00000259043 KRT8P05787 483 aa3.82□□□□□ -1.8
TRA2B-201ENST00000259043 GP1BAP07359 652 aa3.82□□□□□ -1.8
TRA2B-201ENST00000259043 TPM1P09493 284 aa3.82□□□□□ -1.8
TRA2B-201ENST00000259043 DPP4P27487 766 aa3.82□□□□□ -1.8
TRA2B-201ENST00000259043 FCGR2BP31994 310 aaPredicted RBP3.82□□□□□ -1.8
TRA2B-201ENST00000259043 FCGR2CP31995 323 aa3.82□□□□□ -1.8
TRA2B-201ENST00000259043 PPP1R2P41236 205 aa3.82□□□□□ -1.8
TRA2B-201ENST00000259043 DUSP3P51452 185 aaPredicted RBP3.82□□□□□ -1.8
TRA2B-201ENST00000259043 SGSHP51688 502 aa3.82□□□□□ -1.8
TRA2B-201ENST00000259043 METAP1P53582 386 aa3.82□□□□□ -1.8
TRA2B-201ENST00000259043 CRYBA2P53672 197 aa3.82□□□□□ -1.8
TRA2B-201ENST00000259043 CLPPQ16740 277 aaPredicted RBP3.82□□□□□ -1.8
TRA2B-201ENST00000259043 LIPKQ5VXJ0 399 aa3.82□□□□□ -1.8
TRA2B-201ENST00000259043 DPY19L2P2Q6ZN68 376 aa3.82□□□□□ -1.8
TRA2B-201ENST00000259043 GDPGP1Q6ZNW5 385 aa3.82□□□□□ -1.8
TRA2B-201ENST00000259043 ZNF720Q7Z2F6 126 aa3.82□□□□□ -1.8
TRA2B-201ENST00000259043 LCA5Q86VQ0 697 aa3.82□□□□□ -1.8
TRA2B-201ENST00000259043 GPBP1Q86WP2 473 aa3.82□□□□□ -1.8
TRA2B-201ENST00000259043 WDR49Q8IV35 697 aa3.82□□□□□ -1.8
TRA2B-201ENST00000259043 OR4N5Q8IXE1 308 aa3.82□□□□□ -1.8
TRA2B-201ENST00000259043 CENPLQ8N0S6 344 aaPredicted RBP3.82□□□□□ -1.8
TRA2B-201ENST00000259043 ARL14Q8N4G2 192 aa3.82□□□□□ -1.8
TRA2B-201ENST00000259043 FBXO25Q8TCJ0 367 aa3.82□□□□□ -1.8
TRA2B-201ENST00000259043 WFDC5Q8TCV5 224 aa3.82□□□□□ -1.8
TRA2B-201ENST00000259043 PNPLA2Q96AD5 504 aa3.82□□□□□ -1.8
TRA2B-201ENST00000259043 FAM131CQ96AQ9 280 aa3.82□□□□□ -1.8
TRA2B-201ENST00000259043 CNRIP1Q96F85 164 aaPredicted RBP3.82□□□□□ -1.8
TRA2B-201ENST00000259043 HPDLQ96IR7 371 aa3.82□□□□□ -1.8
TRA2B-201ENST00000259043 ANKRD27Q96NW4 1050 aa3.82□□□□□ -1.8
TRA2B-201ENST00000259043 PARVGQ9HBI0 331 aa3.82□□□□□ -1.8
TRA2B-201ENST00000259043 CSNK1G1Q9HCP0 422 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms