RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 C1QTNF9P0C862 333 aa11.68□□□□□ -0.54
LSM8-201ENST00000249299 SAGP10523 405 aaPredicted RBP11.68□□□□□ -0.54
LSM8-201ENST00000249299 POU2F1P14859 743 aa11.68□□□□□ -0.54
LSM8-201ENST00000249299 FUT1P19526 365 aa11.68□□□□□ -0.54
LSM8-201ENST00000249299 CRISP1P54107 249 aa11.68□□□□□ -0.54
LSM8-201ENST00000249299 GPR85P60893 370 aa11.68□□□□□ -0.54
LSM8-201ENST00000249299 RPS4XP62701 263 aaKnown RBP11.68□□□□□ -0.54
LSM8-201ENST00000249299 ZNF169Q14929 603 aaPredicted RBP11.68□□□□□ -0.54
LSM8-201ENST00000249299 ZBED5Q49AG3 693 aa11.68□□□□□ -0.54
LSM8-201ENST00000249299 ZNF620Q6ZNG0 422 aa11.68□□□□□ -0.54
LSM8-201ENST00000249299 ASB18Q6ZVZ8 466 aa11.68□□□□□ -0.54
LSM8-201ENST00000249299 USP51Q70EK9 711 aa11.68□□□□□ -0.54
LSM8-201ENST00000249299 MAMDC2Q7Z304 686 aaPredicted RBP11.68□□□□□ -0.54
LSM8-201ENST00000249299 OAFQ86UD1 273 aa11.68□□□□□ -0.54
LSM8-201ENST00000249299 SCAIQ8N9R8 606 aa11.68□□□□□ -0.54
LSM8-201ENST00000249299 ADPRHL1Q8NDY3 354 aa11.68□□□□□ -0.54
LSM8-201ENST00000249299 SETD9Q8NE22 299 aa11.68□□□□□ -0.54
LSM8-201ENST00000249299 FAM83FQ8NEG4 500 aaPredicted RBP11.68□□□□□ -0.54
LSM8-201ENST00000249299 PFN4Q8NHR9 129 aa11.68□□□□□ -0.54
LSM8-201ENST00000249299 TRUB1Q8WWH5 349 aaKnown RBP11.68□□□□□ -0.54
LSM8-201ENST00000249299 FAM46AQ96IP4 442 aaKnown RBP11.68□□□□□ -0.54
LSM8-201ENST00000249299 GPA33Q99795 319 aa11.68□□□□□ -0.54
LSM8-201ENST00000249299 PRRG3Q9BZD7 231 aa11.68□□□□□ -0.54
LSM8-201ENST00000249299 ZDHHC11Q9H8X9 412 aa11.68□□□□□ -0.54
LSM8-201ENST00000249299 NANSQ9NR45 359 aa11.68□□□□□ -0.54
LSM8-201ENST00000249299 KLHL1Q9NR64 748 aa11.68□□□□□ -0.54
LSM8-201ENST00000249299 C20orf141Q9NUB4 165 aa11.68□□□□□ -0.54
LSM8-201ENST00000249299 BAIAP2Q9UQB8 552 aa11.68□□□□□ -0.54
LSM8-201ENST00000249299 SIGLEC7Q9Y286 467 aa11.68□□□□□ -0.54
LSM8-201ENST00000249299 MED19A0JLT2 244 aaPredicted RBP11.67□□□□□ -0.54
LSM8-201ENST00000249299 OR2M5A3KFT3 312 aa11.67□□□□□ -0.54
LSM8-201ENST00000249299 PINLYPA6NC86 204 aa11.67□□□□□ -0.54
LSM8-201ENST00000249299 ZAR1LA6NP61 321 aa11.67□□□□□ -0.54
LSM8-201ENST00000249299 CDC42EP2O14613 210 aa11.67□□□□□ -0.54
LSM8-201ENST00000249299 GMFGO60234 142 aa11.67□□□□□ -0.54
LSM8-201ENST00000249299 MPZL2O60487 215 aa11.67□□□□□ -0.54
LSM8-201ENST00000249299 F10P00742 488 aa11.67□□□□□ -0.54
LSM8-201ENST00000249299 HIST1H2ABP04908 130 aa11.67□□□□□ -0.54
LSM8-201ENST00000249299 RFPL3SP0C7P2 107 aa11.67□□□□□ -0.54
LSM8-201ENST00000249299 APEHP13798 732 aaKnown RBP11.67□□□□□ -0.54
LSM8-201ENST00000249299 BMP7P18075 431 aa11.67□□□□□ -0.54
LSM8-201ENST00000249299 MAKP20794 623 aa11.67□□□□□ -0.54
LSM8-201ENST00000249299 GDF1P27539 372 aa11.67□□□□□ -0.54
LSM8-201ENST00000249299 IDUAP35475 653 aa11.67□□□□□ -0.54
LSM8-201ENST00000249299 GIPRP48546 466 aa11.67□□□□□ -0.54
LSM8-201ENST00000249299 ST13P50502 369 aaKnown RBP11.67□□□□□ -0.54
LSM8-201ENST00000249299 SMSP52788 366 aa11.67□□□□□ -0.54
LSM8-201ENST00000249299 GFRA1P56159 465 aa11.67□□□□□ -0.54
LSM8-201ENST00000249299 NUP107P57740 925 aa11.67□□□□□ -0.54
LSM8-201ENST00000249299 B3GALT5-AS1P59052 145 aa11.67□□□□□ -0.54
LSM8-201ENST00000249299 PPIAP62937 165 aaKnown RBP11.67□□□□□ -0.54
LSM8-201ENST00000249299 CDK5Q00535 292 aa11.67□□□□□ -0.54
LSM8-201ENST00000249299 PLGLB1Q02325 96 aa11.67□□□□□ -0.54
LSM8-201ENST00000249299 MED21Q13503 144 aa11.67□□□□□ -0.54
LSM8-201ENST00000249299 SLC10A1Q14973 349 aa11.67□□□□□ -0.54
LSM8-201ENST00000249299 ZNF239Q16600 458 aaKnown RBP11.67□□□□□ -0.54
LSM8-201ENST00000249299 RAET1LQ5VY80 246 aa11.67□□□□□ -0.54
LSM8-201ENST00000249299 SLC27A4Q6P1M0 643 aa11.67□□□□□ -0.54
LSM8-201ENST00000249299 SMARCD3Q6STE5 483 aa11.67□□□□□ -0.54
LSM8-201ENST00000249299 HIST3H2AQ7L7L0 130 aa11.67□□□□□ -0.54
LSM8-201ENST00000249299 SLC46A3Q7Z3Q1 461 aa11.67□□□□□ -0.54
LSM8-201ENST00000249299 GALNT5Q7Z7M9 940 aa11.67□□□□□ -0.54
LSM8-201ENST00000249299 DEPDC4Q8N2C3 294 aa11.67□□□□□ -0.54
LSM8-201ENST00000249299 MARVELD2Q8N4S9 558 aa11.67□□□□□ -0.54
LSM8-201ENST00000249299 TMEM251Q8N6I4 163 aa11.67□□□□□ -0.54
LSM8-201ENST00000249299 OR14L1PQ8NHC6 308 aa11.67□□□□□ -0.54
LSM8-201ENST00000249299 TEX47Q8TBZ9 253 aa11.67□□□□□ -0.54
LSM8-201ENST00000249299 HIST1H2ACQ93077 130 aa11.67□□□□□ -0.54
LSM8-201ENST00000249299 KTI12Q96EK9 354 aaPredicted RBP11.67□□□□□ -0.54
LSM8-201ENST00000249299 GPX7Q96SL4 187 aaPredicted RBP11.67□□□□□ -0.54
LSM8-201ENST00000249299 MBOAT4Q96T53 435 aa11.67□□□□□ -0.54
LSM8-201ENST00000249299 APOL4Q9BPW4 351 aa11.67□□□□□ -0.54
LSM8-201ENST00000249299 PTDSS2Q9BVG9 487 aa11.67□□□□□ -0.54
LSM8-201ENST00000249299 SLC25A19Q9HC21 320 aa11.67□□□□□ -0.54
LSM8-201ENST00000249299 FANCFQ9NPI8 374 aa11.67□□□□□ -0.54
LSM8-201ENST00000249299 MRPL39Q9NYK5 338 aaKnown RBP11.67□□□□□ -0.54
LSM8-201ENST00000249299 B3GNT3Q9Y2A9 372 aa11.67□□□□□ -0.54
LSM8-201ENST00000249299 B3GALT5Q9Y2C3 310 aa11.67□□□□□ -0.54
LSM8-201ENST00000249299 HIF3AQ9Y2N7 669 aa11.67□□□□□ -0.54
LSM8-201ENST00000249299 CNTRLQ7Z7A1 2325 aa11.67□□□□□ -0.54
LSM8-201ENST00000249299 ANKRD11Q6UB99 2663 aaPredicted RBP11.66□□□□□ -0.54
LSM8-201ENST00000249299 HEATR5AQ86XA9 2040 aa11.66□□□□□ -0.54
LSM8-201ENST00000249299 LOC102725191A0A1B0GVB3 256 aa11.66□□□□□ -0.54
LSM8-201ENST00000249299 FTCDNL1E5RQL4 147 aa11.66□□□□□ -0.54
LSM8-201ENST00000249299 KPNA4O00629 521 aaPredicted RBP11.66□□□□□ -0.54
LSM8-201ENST00000249299 IDH3BO43837 385 aa11.66□□□□□ -0.54
LSM8-201ENST00000249299 EFNA2O43921 213 aa11.66□□□□□ -0.54
LSM8-201ENST00000249299 PIP5K1CO60331 668 aa11.66□□□□□ -0.54
LSM8-201ENST00000249299 EIF1BO60739 113 aaKnown RBP11.66□□□□□ -0.54
LSM8-201ENST00000249299 MITFO75030 526 aaPredicted RBP11.66□□□□□ -0.54
LSM8-201ENST00000249299 NDUFB2O95178 105 aa11.66□□□□□ -0.54
LSM8-201ENST00000249299 PMS2P2O95744 297 aa11.66□□□□□ -0.54
LSM8-201ENST00000249299 CH25HO95992 272 aa11.66□□□□□ -0.54
LSM8-201ENST00000249299 ACTL6AO96019 429 aa11.66□□□□□ -0.54
LSM8-201ENST00000249299 BGLAPP02818 100 aa11.66□□□□□ -0.54
LSM8-201ENST00000249299 TP53P04637 393 aaPredicted RBP11.66□□□□□ -0.54
LSM8-201ENST00000249299 HMGN1P05114 100 aa11.66□□□□□ -0.54
LSM8-201ENST00000249299 SFTPCP11686 197 aa11.66□□□□□ -0.54
LSM8-201ENST00000249299 MYF6P23409 242 aa11.66□□□□□ -0.54
LSM8-201ENST00000249299 GPR4P46093 362 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms