RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 ANGPTL4Q9BY76 406 aa12.89□□□□□ -0.35
SDF2-201ENST00000247020 LHPPQ9H008 270 aa12.89□□□□□ -0.35
SDF2-201ENST00000247020 RACGAP1Q9H0H5 632 aa12.89□□□□□ -0.35
SDF2-201ENST00000247020 PTGES2Q9H7Z7 377 aa12.89□□□□□ -0.35
SDF2-201ENST00000247020 HPF1Q9NWY4 346 aa12.89□□□□□ -0.35
SDF2-201ENST00000247020 H2AFY2Q9P0M6 372 aaPredicted RBP12.89□□□□□ -0.35
SDF2-201ENST00000247020 RSL24D1Q9UHA3 163 aaKnown RBP12.89□□□□□ -0.35
SDF2-201ENST00000247020 A0A087WZY1 265 aa12.88□□□□□ -0.35
SDF2-201ENST00000247020 RIIAD1A6NNX1 92 aa12.88□□□□□ -0.35
SDF2-201ENST00000247020 FAM47E-STBD1D6RA91 191 aa12.88□□□□□ -0.35
SDF2-201ENST00000247020 H3BSA7 217 aa12.88□□□□□ -0.35
SDF2-201ENST00000247020 IMPA2O14732 288 aa12.88□□□□□ -0.35
SDF2-201ENST00000247020 SUSD5O60279 629 aa12.88□□□□□ -0.35
SDF2-201ENST00000247020 MAN1A2O60476 641 aa12.88□□□□□ -0.35
SDF2-201ENST00000247020 DXOO77932 396 aaKnown RBP12.88□□□□□ -0.35
SDF2-201ENST00000247020 FADS2O95864 444 aaKnown RBP12.88□□□□□ -0.35
SDF2-201ENST00000247020 BGLAPP02818 100 aa12.88□□□□□ -0.35
SDF2-201ENST00000247020 STSP08842 583 aa12.88□□□□□ -0.35
SDF2-201ENST00000247020 ZNF3P17036 446 aa12.88□□□□□ -0.35
SDF2-201ENST00000247020 ACVR2AP27037 513 aa12.88□□□□□ -0.35
SDF2-201ENST00000247020 UQCRC1P31930 480 aa12.88□□□□□ -0.35
SDF2-201ENST00000247020 MFSD13AQ14CX5 517 aa12.88□□□□□ -0.35
SDF2-201ENST00000247020 FAM69AQ5T7M9 428 aa12.88□□□□□ -0.35
SDF2-201ENST00000247020 SLC22A10Q63ZE4 541 aa12.88□□□□□ -0.35
SDF2-201ENST00000247020 IL20RBQ6UXL0 311 aa12.88□□□□□ -0.35
SDF2-201ENST00000247020 CXXC5Q7LFL8 322 aaKnown RBP12.88□□□□□ -0.35
SDF2-201ENST00000247020 TMPRSS7Q7RTY8 843 aa12.88□□□□□ -0.35
SDF2-201ENST00000247020 KIAA1143Q96AT1 154 aaPredicted RBP12.88□□□□□ -0.35
SDF2-201ENST00000247020 PHOX2BQ99453 314 aa12.88□□□□□ -0.35
SDF2-201ENST00000247020 DOK1Q99704 481 aa12.88□□□□□ -0.35
SDF2-201ENST00000247020 BCL7BQ9BQE9 202 aa12.88□□□□□ -0.35
SDF2-201ENST00000247020 FGF20Q9NP95 211 aaPredicted RBP12.88□□□□□ -0.35
SDF2-201ENST00000247020 NRIP3Q9NQ35 241 aa12.88□□□□□ -0.35
SDF2-201ENST00000247020 MED11Q9P086 117 aa12.88□□□□□ -0.35
SDF2-201ENST00000247020 CHRNA9Q9UGM1 479 aa12.88□□□□□ -0.35
SDF2-201ENST00000247020 DIMT1Q9UNQ2 313 aaKnown RBP12.88□□□□□ -0.35
SDF2-201ENST00000247020 KNTC1P50748 2209 aa12.87□□□□□ -0.35
SDF2-201ENST00000247020 EML6Q6ZMW3 1958 aa12.87□□□□□ -0.35
SDF2-201ENST00000247020 TMEM72A0PK05 275 aa12.87□□□□□ -0.35
SDF2-201ENST00000247020 CCDC160A6NGH7 325 aa12.87□□□□□ -0.35
SDF2-201ENST00000247020 C17orf51A8MQB3 221 aa12.87□□□□□ -0.35
SDF2-201ENST00000247020 RAB36O95755 333 aa12.87□□□□□ -0.35
SDF2-201ENST00000247020 HIST1H2ABP04908 130 aa12.87□□□□□ -0.35
SDF2-201ENST00000247020 PAICSP22234 425 aaKnown RBP12.87□□□□□ -0.35
SDF2-201ENST00000247020 C21orf33P30042 268 aaPredicted RBP12.87□□□□□ -0.35
SDF2-201ENST00000247020 HTR1FP30939 366 aa12.87□□□□□ -0.35
SDF2-201ENST00000247020 MTNR1AP48039 350 aa12.87□□□□□ -0.35
SDF2-201ENST00000247020 ST13P50502 369 aaKnown RBP12.87□□□□□ -0.35
SDF2-201ENST00000247020 TMBIM6P55061 237 aa12.87□□□□□ -0.35
SDF2-201ENST00000247020 CDH11P55287 796 aa12.87□□□□□ -0.35
SDF2-201ENST00000247020 PLPPR5Q32ZL2 321 aa12.87□□□□□ -0.35
SDF2-201ENST00000247020 CNPY1Q3B7I2 92 aa12.87□□□□□ -0.35
SDF2-201ENST00000247020 BICRALQ6AI39 1079 aa12.87□□□□□ -0.35
SDF2-201ENST00000247020 HIST3H2AQ7L7L0 130 aa12.87□□□□□ -0.35
SDF2-201ENST00000247020 MAMDC2Q7Z304 686 aaPredicted RBP12.87□□□□□ -0.35
SDF2-201ENST00000247020 NANOGNBQ7Z5D8 188 aa12.87□□□□□ -0.35
SDF2-201ENST00000247020 CLVS1Q8IUQ0 354 aaPredicted RBP12.87□□□□□ -0.35
SDF2-201ENST00000247020 IL22RA1Q8N6P7 574 aa12.87□□□□□ -0.35
SDF2-201ENST00000247020 OR2M3Q8NG83 312 aa12.87□□□□□ -0.35
SDF2-201ENST00000247020 HIST1H2ACQ93077 130 aa12.87□□□□□ -0.35
SDF2-201ENST00000247020 TAAR8Q969N4 342 aa12.87□□□□□ -0.35
SDF2-201ENST00000247020 ZBTB8AQ96BR9 441 aa12.87□□□□□ -0.35
SDF2-201ENST00000247020 KTI12Q96EK9 354 aaPredicted RBP12.87□□□□□ -0.35
SDF2-201ENST00000247020 FER1L6-AS2Q96M78 137 aa12.87□□□□□ -0.35
SDF2-201ENST00000247020 ENKD1Q9H0I2 346 aa12.87□□□□□ -0.35
SDF2-201ENST00000247020 ASCL3Q9NQ33 180 aa12.87□□□□□ -0.35
SDF2-201ENST00000247020 HINT3Q9NQE9 182 aaKnown RBP12.87□□□□□ -0.35
SDF2-201ENST00000247020 IL20RAQ9UHF4 553 aa12.87□□□□□ -0.35
SDF2-201ENST00000247020 TEKT2Q9UIF3 430 aa12.87□□□□□ -0.35
SDF2-201ENST00000247020 GPR52Q9Y2T5 361 aa12.87□□□□□ -0.35
SDF2-201ENST00000247020 SPIN1Q9Y657 262 aaPredicted RBP12.87□□□□□ -0.35
SDF2-201ENST00000247020 PRR23D1E9PI22 279 aaPredicted RBP12.86□□□□□ -0.35
SDF2-201ENST00000247020 NOL3O60936 208 aaKnown RBP12.86□□□□□ -0.35
SDF2-201ENST00000247020 FZD7O75084 574 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 TRMUO75648 421 aaKnown RBP12.86□□□□□ -0.35
SDF2-201ENST00000247020 SNX4O95219 450 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 AHSA1O95433 338 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 PPP1R3DO95685 299 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 PRR23D2P0DMB1 279 aaPredicted RBP12.86□□□□□ -0.35
SDF2-201ENST00000247020 LIPCP11150 499 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 NOS3P29474 1203 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 EIF1P41567 113 aaKnown RBP12.86□□□□□ -0.35
SDF2-201ENST00000247020 NOVA1P51513 510 aaKnown RBP12.86□□□□□ -0.35
SDF2-201ENST00000247020 GP2P55259 537 aaKnown RBP12.86□□□□□ -0.35
SDF2-201ENST00000247020 SH3BGRP55822 239 aaPredicted RBP12.86□□□□□ -0.35
SDF2-201ENST00000247020 AIMP2Q13155 320 aaKnown RBP12.86□□□□□ -0.35
SDF2-201ENST00000247020 ATP1A4Q13733 1029 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 EMC4Q5J8M3 183 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 ACER2Q5QJU3 275 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 C1orf140Q5VVS0 124 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 CCDC81Q6ZN84 652 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 ZNF367Q7RTV3 350 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 PLCZ1Q86YW0 608 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 LRRC17Q8N6Y2 441 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 OR4K17Q8NGC6 315 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 DDIT4LQ96D03 193 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 C1GALT1C1Q96EU7 318 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 TMEM41AQ96HV5 264 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 PTDSS2Q9BVG9 487 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 JAM3Q9BX67 310 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 150.2 ms