RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 A0A0G2JK05 382 aa14.79□□□□□ -0.04
UBE3D-201ENST00000237186 FRG2CA6NGY1 282 aa14.79□□□□□ -0.04
UBE3D-201ENST00000237186 HMX3A6NHT5 357 aa14.79□□□□□ -0.04
UBE3D-201ENST00000237186 GNB5O14775 395 aa14.79□□□□□ -0.04
UBE3D-201ENST00000237186 ELK1P19419 428 aa14.79□□□□□ -0.04
UBE3D-201ENST00000237186 PYCR1P32322 319 aa14.79□□□□□ -0.04
UBE3D-201ENST00000237186 KIR2DL3P43628 341 aa14.79□□□□□ -0.04
UBE3D-201ENST00000237186 DAB2P98082 770 aa14.79□□□□□ -0.04
UBE3D-201ENST00000237186 IL18Q14116 193 aa14.79□□□□□ -0.04
UBE3D-201ENST00000237186 CD226Q15762 336 aa14.79□□□□□ -0.04
UBE3D-201ENST00000237186 ACSM3Q53FZ2 586 aa14.79□□□□□ -0.04
UBE3D-201ENST00000237186 NCCRP1Q6ZVX7 275 aaPredicted RBP14.79□□□□□ -0.04
UBE3D-201ENST00000237186 LRRC28Q86X40 367 aaPredicted RBP14.79□□□□□ -0.04
UBE3D-201ENST00000237186 C19orf18Q8NEA5 215 aa14.79□□□□□ -0.04
UBE3D-201ENST00000237186 LMF1Q96S06 567 aa14.79□□□□□ -0.04
UBE3D-201ENST00000237186 CTRCQ99895 268 aa14.79□□□□□ -0.04
UBE3D-201ENST00000237186 ZCCHC4Q9H5U6 513 aa14.79□□□□□ -0.04
UBE3D-201ENST00000237186 C12orf10Q9HB07 376 aa14.79□□□□□ -0.04
UBE3D-201ENST00000237186 HIF3AQ9Y2N7 669 aa14.79□□□□□ -0.04
UBE3D-201ENST00000237186 ADAM18Q9Y3Q7 739 aa14.79□□□□□ -0.04
UBE3D-201ENST00000237186 LINC00854A0A1B0GVQ3 168 aa14.78□□□□□ -0.04
UBE3D-201ENST00000237186 RHPN2P1A8MT19 583 aa14.78□□□□□ -0.04
UBE3D-201ENST00000237186 TMEM150CB9EJG8 249 aa14.78□□□□□ -0.04
UBE3D-201ENST00000237186 OR2B3O76000 313 aa14.78□□□□□ -0.04
UBE3D-201ENST00000237186 FAM157BP0CG42 384 aa14.78□□□□□ -0.04
UBE3D-201ENST00000237186 UBL4AP11441 157 aa14.78□□□□□ -0.04
UBE3D-201ENST00000237186 MYL9P24844 172 aa14.78□□□□□ -0.04
UBE3D-201ENST00000237186 RPL4P36578 427 aaKnown RBP14.78□□□□□ -0.04
UBE3D-201ENST00000237186 DDOSTP39656 456 aa14.78□□□□□ -0.04
UBE3D-201ENST00000237186 HSF2Q03933 536 aa14.78□□□□□ -0.04
UBE3D-201ENST00000237186 ZNF74Q16587 644 aa14.78□□□□□ -0.04
UBE3D-201ENST00000237186 CCDC58Q4VC31 144 aa14.78□□□□□ -0.04
UBE3D-201ENST00000237186 IDNKQ5T6J7 187 aa14.78□□□□□ -0.04
UBE3D-201ENST00000237186 NKAIN2Q5VXU1 208 aa14.78□□□□□ -0.04
UBE3D-201ENST00000237186 SFXN4Q6P4A7 337 aa14.78□□□□□ -0.04
UBE3D-201ENST00000237186 TTLL10Q6ZVT0 673 aa14.78□□□□□ -0.04
UBE3D-201ENST00000237186 TMEM151BQ8IW70 566 aa14.78□□□□□ -0.04
UBE3D-201ENST00000237186 SLC35F2Q8IXU6 374 aa14.78□□□□□ -0.04
UBE3D-201ENST00000237186 SMAP2Q8WU79 429 aaPredicted RBP14.78□□□□□ -0.04
UBE3D-201ENST00000237186 ADIPOR1Q96A54 375 aa14.78□□□□□ -0.04
UBE3D-201ENST00000237186 SMIM19Q96E16 107 aa14.78□□□□□ -0.04
UBE3D-201ENST00000237186 PELI1Q96FA3 418 aa14.78□□□□□ -0.04
UBE3D-201ENST00000237186 LCORQ96JN0 433 aaPredicted RBP14.78□□□□□ -0.04
UBE3D-201ENST00000237186 CDX2Q99626 313 aaPredicted RBP14.78□□□□□ -0.04
UBE3D-201ENST00000237186 NXF5Q9H1B4 397 aaKnown RBP14.78□□□□□ -0.04
UBE3D-201ENST00000237186 MMP28Q9H239 520 aa14.78□□□□□ -0.04
UBE3D-201ENST00000237186 B3GAT2Q9NPZ5 323 aa14.78□□□□□ -0.04
UBE3D-201ENST00000237186 MRTO4Q9UKD2 239 aaKnown RBP14.78□□□□□ -0.04
UBE3D-201ENST00000237186 POU2F3Q9UKI9 436 aa14.78□□□□□ -0.04
UBE3D-201ENST00000237186 RNF215Q9Y6U7 377 aa14.78□□□□□ -0.04
UBE3D-201ENST00000237186 MAU2Q9Y6X3 613 aa14.78□□□□□ -0.04
UBE3D-201ENST00000237186 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.78□□□□□ -0.04
UBE3D-201ENST00000237186 OR6C68A6NDL8 312 aa14.78□□□□□ -0.04
UBE3D-201ENST00000237186 ELOA3DA6NLF2 546 aaPredicted RBP14.78□□□□□ -0.04
UBE3D-201ENST00000237186 SCDO00767 359 aa14.78□□□□□ -0.04
UBE3D-201ENST00000237186 IMPA2O14732 288 aa14.78□□□□□ -0.04
UBE3D-201ENST00000237186 PIAS2O75928 621 aa14.78□□□□□ -0.04
UBE3D-201ENST00000237186 UTS2O95399 124 aa14.78□□□□□ -0.04
UBE3D-201ENST00000237186 SPI1P17947 270 aa14.78□□□□□ -0.04
UBE3D-201ENST00000237186 MAP2K3P46734 347 aa14.78□□□□□ -0.04
UBE3D-201ENST00000237186 GBX2P52951 348 aaPredicted RBP14.78□□□□□ -0.04
UBE3D-201ENST00000237186 DCAF7P61962 342 aa14.78□□□□□ -0.04
UBE3D-201ENST00000237186 SIRPAP78324 504 aa14.78□□□□□ -0.04
UBE3D-201ENST00000237186 HSD11B2P80365 405 aa14.78□□□□□ -0.04
UBE3D-201ENST00000237186 CDK5R1Q15078 307 aa14.78□□□□□ -0.04
UBE3D-201ENST00000237186 ELOA3BQ3SY89 546 aa14.78□□□□□ -0.04
UBE3D-201ENST00000237186 RPL22L1Q6P5R6 122 aaKnown RBP14.78□□□□□ -0.04
UBE3D-201ENST00000237186 APOOLQ6UXV4 268 aa14.78□□□□□ -0.04
UBE3D-201ENST00000237186 RPTNQ6XPR3 784 aa14.78□□□□□ -0.04
UBE3D-201ENST00000237186 ZNF321PQ8N8H1 164 aa14.78□□□□□ -0.04
UBE3D-201ENST00000237186 LRRC75AQ8NAA5 344 aa14.78□□□□□ -0.04
UBE3D-201ENST00000237186 ELOA3Q8NG57 546 aa14.78□□□□□ -0.04
UBE3D-201ENST00000237186 MRPL48Q96GC5 212 aaKnown RBP14.78□□□□□ -0.04
UBE3D-201ENST00000237186 FRMD6Q96NE9 622 aa14.78□□□□□ -0.04
UBE3D-201ENST00000237186 NMNAT3Q96T66 252 aa14.78□□□□□ -0.04
UBE3D-201ENST00000237186 RNF121Q9H920 327 aa14.78□□□□□ -0.04
UBE3D-201ENST00000237186 PNO1Q9NRX1 252 aaKnown RBP14.78□□□□□ -0.04
UBE3D-201ENST00000237186 SLC6A5Q9Y345 797 aa14.78□□□□□ -0.04
UBE3D-201ENST00000237186 IGHV1OR21-1A0A087WYE8 117 aa14.77□□□□□ -0.05
UBE3D-201ENST00000237186 ZNF264O43296 627 aa14.77□□□□□ -0.05
UBE3D-201ENST00000237186 OIP5O43482 229 aa14.77□□□□□ -0.05
UBE3D-201ENST00000237186 DDAH2O95865 285 aa14.77□□□□□ -0.05
UBE3D-201ENST00000237186 KRT8P05787 483 aa14.77□□□□□ -0.05
UBE3D-201ENST00000237186 HPGDP15428 266 aa14.77□□□□□ -0.05
UBE3D-201ENST00000237186 NPR2P20594 1047 aa14.77□□□□□ -0.05
UBE3D-201ENST00000237186 ACVR1BP36896 505 aa14.77□□□□□ -0.05
UBE3D-201ENST00000237186 GRK6P43250 576 aa14.77□□□□□ -0.05
UBE3D-201ENST00000237186 SLC25A1P53007 311 aa14.77□□□□□ -0.05
UBE3D-201ENST00000237186 RPL6Q02878 288 aaKnown RBP14.77□□□□□ -0.05
UBE3D-201ENST00000237186 ELAVL1Q15717 326 aaKnown RBP14.77□□□□□ -0.05
UBE3D-201ENST00000237186 FAM27D1Q5T7N8 215 aa14.77□□□□□ -0.05
UBE3D-201ENST00000237186 LINC01590Q5TEZ4 76 aa14.77□□□□□ -0.05
UBE3D-201ENST00000237186 RSBN1Q5VWQ0 802 aaPredicted RBP14.77□□□□□ -0.05
UBE3D-201ENST00000237186 MZT2BQ6NZ67 158 aa14.77□□□□□ -0.05
UBE3D-201ENST00000237186 CBLN3Q6UW01 205 aa14.77□□□□□ -0.05
UBE3D-201ENST00000237186 Q7L0L9 218 aa14.77□□□□□ -0.05
UBE3D-201ENST00000237186 D2HGDHQ8N465 521 aa14.77□□□□□ -0.05
UBE3D-201ENST00000237186 RFLNBQ8N5W9 214 aa14.77□□□□□ -0.05
UBE3D-201ENST00000237186 SCAIQ8N9R8 606 aa14.77□□□□□ -0.05
UBE3D-201ENST00000237186 PHOSPHO1Q8TCT1 267 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms