RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 SRSF4Q08170 494 aaKnown RBP12.03□□□□□ -0.48
MSH2-201ENST00000233146 KIAA0141Q14154 515 aaPredicted RBP12.03□□□□□ -0.48
MSH2-201ENST00000233146 TBC1D3CQ6IPX1 549 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 C1orf94Q6P1W5 598 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 ZNF574Q6ZN55 896 aaPredicted RBP12.03□□□□□ -0.48
MSH2-201ENST00000233146 GLT6D1Q7Z4J2 308 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 TBC1D3Q8IZP1 549 aaPredicted RBP12.03□□□□□ -0.48
MSH2-201ENST00000233146 LRRC18Q8N456 261 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 LCN9Q8WX39 176 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 MYEOVQ96EZ4 313 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 GULP1Q9UBP9 304 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 GOLT1BQ9Y3E0 138 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 ZNF337Q9Y3M9 751 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 MOXD2PA6NHM9 499 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 HHLA1C9JL84 531 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 H7C1Q1 480 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 IRAK2O43187 625 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 MPIP34949 423 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 DLSTP36957 453 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 GSK3AP49840 483 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 ZNF750Q32MQ0 723 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 FRG2Q64ET8 278 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 FAM199XQ6PEV8 388 aaPredicted RBP12.03□□□□□ -0.48
MSH2-201ENST00000233146 OR10R2Q8NGX6 335 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 LINC01599Q8WXQ3 324 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 PPCDCQ96CD2 204 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 FRG2BQ96QU4 278 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 RUVBL1Q9Y265 456 aaKnown RBP12.03□□□□□ -0.48
MSH2-201ENST00000233146 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.03□□□□□ -0.48
MSH2-201ENST00000233146 A0A1W2PPC1 479 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 FAM157AC9JC47 383 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 CRTAPO75718 401 aaPredicted RBP12.03□□□□□ -0.48
MSH2-201ENST00000233146 ZNF25P17030 456 aaPredicted RBP12.03□□□□□ -0.48
MSH2-201ENST00000233146 P2RX1P51575 399 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 LSM11P83369 360 aaKnown RBP eCLIP12.03□□□□□ -0.482e-11■■■■□ 20.2
MSH2-201ENST00000233146 SMAD4Q13485 552 aaKnown RBP12.03□□□□□ -0.48
MSH2-201ENST00000233146 DDX39BQ13838 428 aaKnown RBP12.03□□□□□ -0.48
MSH2-201ENST00000233146 ARHGAP40Q5TG30 622 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 FAM83HQ6ZRV2 1179 aaPredicted RBP12.03□□□□□ -0.48
MSH2-201ENST00000233146 SYT9Q86SS6 491 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 FAM24BQ8N5W8 94 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 SLC30A7Q8NEW0 376 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 OR4K5Q8NGD3 323 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 OR4D11Q8NGI4 311 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 NUDCD2Q8WVJ2 157 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 HSPA12BQ96MM6 686 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 ADGRE3Q9BY15 652 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 ADAM19Q9H013 955 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 TRIM36Q9NQ86 728 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 TMEM248Q9NWD8 314 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 LCTP09848 1927 aa12.02□□□□□ -0.48
MSH2-201ENST00000233146 C7orf77A4D0Y5 90 aa12.02□□□□□ -0.49
MSH2-201ENST00000233146 F8VVB4 439 aa12.02□□□□□ -0.49
MSH2-201ENST00000233146 F8VWA3 439 aa12.02□□□□□ -0.49
MSH2-201ENST00000233146 RPL36A-HNRNPH2H7BZ11 118 aa12.02□□□□□ -0.49
MSH2-201ENST00000233146 EREGO14944 169 aa12.02□□□□□ -0.49
MSH2-201ENST00000233146 NDUFS1P28331 727 aa12.02□□□□□ -0.49
MSH2-201ENST00000233146 HTR1FP30939 366 aa12.02□□□□□ -0.49
MSH2-201ENST00000233146 ACSM3Q53FZ2 586 aa12.02□□□□□ -0.49
MSH2-201ENST00000233146 HENMT1Q5T8I9 393 aaKnown RBP12.02□□□□□ -0.49
MSH2-201ENST00000233146 DRAM2Q6UX65 266 aa12.02□□□□□ -0.49
MSH2-201ENST00000233146 UNQ6126/PRO20091Q6UXV3 157 aa12.02□□□□□ -0.49
MSH2-201ENST00000233146 SIRT6Q8N6T7 355 aa12.02□□□□□ -0.49
MSH2-201ENST00000233146 PNLDC1Q8NA58 520 aaKnown RBP12.02□□□□□ -0.49
MSH2-201ENST00000233146 IL21RQ9HBE5 538 aa12.02□□□□□ -0.49
MSH2-201ENST00000233146 MBD1Q9UIS9 605 aaPredicted RBP12.02□□□□□ -0.49
MSH2-201ENST00000233146 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.02□□□□□ -0.49
MSH2-201ENST00000233146 SEC14L6B5MCN3 397 aa12.02□□□□□ -0.49
MSH2-201ENST00000233146 ATP6V1E1P36543 226 aa12.02□□□□□ -0.49
MSH2-201ENST00000233146 CBFBQ13951 182 aa12.02□□□□□ -0.49
MSH2-201ENST00000233146 GRB14Q14449 540 aa12.02□□□□□ -0.49
MSH2-201ENST00000233146 VWA2Q5GFL6 755 aa12.02□□□□□ -0.49
MSH2-201ENST00000233146 DHRS11Q6UWP2 260 aa12.02□□□□□ -0.49
MSH2-201ENST00000233146 FBXO16Q8IX29 292 aaPredicted RBP12.02□□□□□ -0.49
MSH2-201ENST00000233146 ZNF671Q8TAW3 534 aa12.02□□□□□ -0.49
MSH2-201ENST00000233146 BSCL2Q96G97 398 aaPredicted RBP12.02□□□□□ -0.49
MSH2-201ENST00000233146 WFDC6Q9BQY6 131 aa12.02□□□□□ -0.49
MSH2-201ENST00000233146 KRCC1Q9NPI7 259 aaPredicted RBP12.02□□□□□ -0.49
MSH2-201ENST00000233146 A4GNTQ9UNA3 340 aa12.02□□□□□ -0.49
MSH2-201ENST00000233146 HS3ST4Q9Y661 456 aa12.02□□□□□ -0.49
MSH2-201ENST00000233146 PIKFYVEQ9Y2I7 2098 aa12.02□□□□□ -0.49
MSH2-201ENST00000233146 C9JQL5 133 aa12.01□□□□□ -0.49
MSH2-201ENST00000233146 DPEP1P16444 411 aa12.01□□□□□ -0.49
MSH2-201ENST00000233146 GJA5P36382 358 aa12.01□□□□□ -0.49
MSH2-201ENST00000233146 COL13A1Q5TAT6 717 aaPredicted RBP12.01□□□□□ -0.49
MSH2-201ENST00000233146 PIK3IP1Q96FE7 263 aa12.01□□□□□ -0.49
MSH2-201ENST00000233146 FCRL4Q96PJ5 515 aa12.01□□□□□ -0.49
MSH2-201ENST00000233146 TEX12Q9BXU0 123 aa12.01□□□□□ -0.49
MSH2-201ENST00000233146 CIPCQ9C0C6 399 aa12.01□□□□□ -0.49
MSH2-201ENST00000233146 DOK5Q9P104 306 aa12.01□□□□□ -0.49
MSH2-201ENST00000233146 SLC27A6Q9Y2P4 619 aa12.01□□□□□ -0.49
MSH2-201ENST00000233146 PLXNA4Q9HCM2 1894 aa12.01□□□□□ -0.49
MSH2-201ENST00000233146 DLEU1O43261 78 aa12.01□□□□□ -0.49
MSH2-201ENST00000233146 SFTPBP07988 381 aa12.01□□□□□ -0.49
MSH2-201ENST00000233146 LINC00614P0C842 121 aa12.01□□□□□ -0.49
MSH2-201ENST00000233146 GSTM3P21266 225 aa12.01□□□□□ -0.49
MSH2-201ENST00000233146 NDUFA6P56556 154 aa12.01□□□□□ -0.49
MSH2-201ENST00000233146 ZNF385BQ569K4 471 aa12.01□□□□□ -0.49
MSH2-201ENST00000233146 NKAIN2Q5VXU1 208 aa12.01□□□□□ -0.49
MSH2-201ENST00000233146 REEP3Q6NUK4 255 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms