RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 NFYBP25208 207 aa13.09□□□□□ -0.31
PCDHB3-201ENST00000231130 PPT1P50897 306 aa13.09□□□□□ -0.31
PCDHB3-201ENST00000231130 LUMP51884 338 aaPredicted RBP13.09□□□□□ -0.31
PCDHB3-201ENST00000231130 STX4Q12846 297 aa13.09□□□□□ -0.31
PCDHB3-201ENST00000231130 GPNMBQ14956 572 aa13.09□□□□□ -0.31
PCDHB3-201ENST00000231130 KLHL26Q53HC5 615 aa13.09□□□□□ -0.31
PCDHB3-201ENST00000231130 CYB5R2Q6BCY4 276 aa13.09□□□□□ -0.31
PCDHB3-201ENST00000231130 OR4C11Q6IEV9 310 aa13.09□□□□□ -0.31
PCDHB3-201ENST00000231130 KIAA1211LQ6NV74 962 aa13.09□□□□□ -0.31
PCDHB3-201ENST00000231130 CD300LDQ6UXZ3 194 aa13.09□□□□□ -0.31
PCDHB3-201ENST00000231130 ZNF620Q6ZNG0 422 aa13.09□□□□□ -0.31
PCDHB3-201ENST00000231130 SLC16A11Q8NCK7 471 aa13.09□□□□□ -0.31
PCDHB3-201ENST00000231130 NUP43Q8NFH3 380 aa13.09□□□□□ -0.31
PCDHB3-201ENST00000231130 CA5BP1Q8WTZ4 195 aa13.09□□□□□ -0.31
PCDHB3-201ENST00000231130 ZMYND19Q96E35 227 aaPredicted RBP13.09□□□□□ -0.31
PCDHB3-201ENST00000231130 CNRIP1Q96F85 164 aaPredicted RBP13.09□□□□□ -0.31
PCDHB3-201ENST00000231130 TRMT2BQ96GJ1 504 aaKnown RBP13.09□□□□□ -0.31
PCDHB3-201ENST00000231130 OR14A2Q96R54 314 aa13.09□□□□□ -0.31
PCDHB3-201ENST00000231130 GAL3ST1Q99999 423 aa13.09□□□□□ -0.31
PCDHB3-201ENST00000231130 ZNF559Q9BR84 538 aa13.09□□□□□ -0.31
PCDHB3-201ENST00000231130 MRPS18AQ9NVS2 196 aaKnown RBP13.09□□□□□ -0.31
PCDHB3-201ENST00000231130 MED9Q9NWA0 146 aa13.09□□□□□ -0.31
PCDHB3-201ENST00000231130 PIPOXQ9P0Z9 390 aa13.09□□□□□ -0.31
PCDHB3-201ENST00000231130 CA5BQ9Y2D0 317 aa13.09□□□□□ -0.31
PCDHB3-201ENST00000231130 ATG2BQ96BY7 2078 aa13.09□□□□□ -0.31
PCDHB3-201ENST00000231130 C1orf196B1AJZ1 125 aa13.08□□□□□ -0.32
PCDHB3-201ENST00000231130 OLFM2O95897 454 aa13.08□□□□□ -0.32
PCDHB3-201ENST00000231130 HPP00738 406 aa13.08□□□□□ -0.32
PCDHB3-201ENST00000231130 GIPP09681 153 aaPredicted RBP13.08□□□□□ -0.32
PCDHB3-201ENST00000231130 SELLP14151 372 aa13.08□□□□□ -0.32
PCDHB3-201ENST00000231130 CSF2RBP32927 897 aa13.08□□□□□ -0.32
PCDHB3-201ENST00000231130 LINC00471Q8N535 108 aa13.08□□□□□ -0.32
PCDHB3-201ENST00000231130 ACOT11Q8WXI4 607 aaPredicted RBP13.08□□□□□ -0.32
PCDHB3-201ENST00000231130 SLC38A1Q9H2H9 487 aa13.08□□□□□ -0.32
PCDHB3-201ENST00000231130 MAFFQ9ULX9 164 aa13.08□□□□□ -0.32
PCDHB3-201ENST00000231130 CENPVL1A0A0U1RR11 272 aa13.08□□□□□ -0.32
PCDHB3-201ENST00000231130 A0A1B0GV90 55 aa13.08□□□□□ -0.32
PCDHB3-201ENST00000231130 ZNF3P17036 446 aa13.08□□□□□ -0.32
PCDHB3-201ENST00000231130 CERS1P27544 350 aa13.08□□□□□ -0.32
PCDHB3-201ENST00000231130 STAT5AP42229 794 aa13.08□□□□□ -0.32
PCDHB3-201ENST00000231130 AKR1C3P42330 323 aa13.08□□□□□ -0.32
PCDHB3-201ENST00000231130 SLC9A5Q14940 896 aa13.08□□□□□ -0.32
PCDHB3-201ENST00000231130 SSX9Q7RTT3 188 aa13.08□□□□□ -0.32
PCDHB3-201ENST00000231130 SLC44A3Q8N4M1 653 aa13.08□□□□□ -0.32
PCDHB3-201ENST00000231130 OR51Q1Q8NH59 317 aa13.08□□□□□ -0.32
PCDHB3-201ENST00000231130 DIO2Q92813 273 aa13.08□□□□□ -0.32
PCDHB3-201ENST00000231130 LRIG1Q96JA1 1093 aa13.08□□□□□ -0.32
PCDHB3-201ENST00000231130 A0A1W2PQ45 241 aaPredicted RBP13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 A0A1W2PQY0 241 aa13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 OR14I1A6ND48 311 aa13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 GATCO43716 136 aaKnown RBP13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 THY1P04216 161 aa13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 UGT2B7P16662 529 aa13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 SSTP61278 116 aa13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 ZNF805Q5CZA5 627 aa13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 MEPCEQ7L2J0 689 aaKnown RBP13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 UBE3DQ7Z6J8 389 aa13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 ADIPOR2Q86V24 386 aa13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 LRRC56Q8IYG6 542 aaPredicted RBP13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 OR11G2Q8NGC1 345 aa13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 OR13C2Q8NGS9 318 aa13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 OR52I2Q8NH67 350 aa13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 OTUB2Q96DC9 234 aa13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 CACYBPQ9HB71 228 aaKnown RBP13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 RRAGCQ9HB90 399 aa13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 RNF186Q9NXI6 227 aa13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 ACOD1A6NK06 481 aa13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 FLRT2O43155 660 aa13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 PRICKLE3O43900 615 aaPredicted RBP13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 ODF4Q2M2E3 257 aa13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 EIF2S3LQ2VIR3 472 aaKnown RBP13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 SEZ6L2Q6UXD5 910 aa13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 THSD4Q6ZMP0 1018 aa13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 MAMSTRQ6ZN01 415 aa13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 CAMK1GQ96NX5 476 aa13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 JAM3Q9BX67 310 aa13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 HRASLSQ9HDD0 168 aa13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 DCAF16Q9NXF7 216 aa13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 MARK1Q9P0L2 795 aa13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 HCFC2Q9Y5Z7 792 aa13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 MEIS3P1A6NDR6 274 aa13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 FAM171A2A8MVW0 826 aa13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 WASH3PC4AMC7 463 aa13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 UBL3O95164 117 aa13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 LATS1O95835 1130 aa13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 HIST1H2ABP04908 130 aa13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 KLK3P07288 261 aaPredicted RBP13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 SMIM6P0DI80 62 aa13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 ZNF14P17017 642 aaPredicted RBP13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 CCR9P51686 369 aa13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 FABP9Q0Z7S8 132 aa13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 C4orf46Q504U0 113 aa13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 TPGS2Q68CL5 300 aa13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 HIST3H2AQ7L7L0 130 aa13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 HIST1H2ACQ93077 130 aa13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 C3orf49Q96BT1 292 aa13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 CD180Q99467 661 aa13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 RHBGQ9H310 441 aa13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 ZNF275Q9NSD4 429 aaPredicted RBP13.07□□□□□ -0.32
PCDHB3-201ENST00000231130 KCNK7Q9Y2U2 307 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms