RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 ELP4Q96EB1 424 aa18.92■□□□□ 0.62
SNX3-201ENST00000230085 SAMD8Q96LT4 415 aa18.92■□□□□ 0.62
SNX3-201ENST00000230085 ZNF681Q96N22 645 aa18.92■□□□□ 0.62
SNX3-201ENST00000230085 LRFN5Q96NI6 719 aa18.92■□□□□ 0.62
SNX3-201ENST00000230085 PRAP1Q96NZ9 151 aa18.92■□□□□ 0.62
SNX3-201ENST00000230085 TIMM29Q9BSF4 260 aa18.92■□□□□ 0.62
SNX3-201ENST00000230085 ACAT2Q9BWD1 397 aa18.92■□□□□ 0.62
SNX3-201ENST00000230085 MTHFD2LQ9H903 347 aaPredicted RBP18.92■□□□□ 0.62
SNX3-201ENST00000230085 PRDM7Q9NQW5 492 aa18.92■□□□□ 0.62
SNX3-201ENST00000230085 CTPS2Q9NRF8 586 aa18.92■□□□□ 0.62
SNX3-201ENST00000230085 ZMIZ1Q9ULJ6 1067 aa18.92■□□□□ 0.62
SNX3-201ENST00000230085 PLAGL1Q9UM63 463 aa18.92■□□□□ 0.62
SNX3-201ENST00000230085 SPATA2Q9UM82 520 aa18.92■□□□□ 0.62
SNX3-201ENST00000230085 BAIAP2Q9UQB8 552 aa18.92■□□□□ 0.62
SNX3-201ENST00000230085 KCNE3Q9Y6H6 103 aa18.92■□□□□ 0.62
SNX3-201ENST00000230085 GOLGA4Q13439 2230 aaKnown RBP18.92■□□□□ 0.62
SNX3-201ENST00000230085 A0A1W2PR48 441 aa18.91■□□□□ 0.62
SNX3-201ENST00000230085 UNC119BA6NIH7 251 aa18.91■□□□□ 0.62
SNX3-201ENST00000230085 ZNF593O00488 134 aaPredicted RBP18.91■□□□□ 0.62
SNX3-201ENST00000230085 TSC22D2O75157 780 aa18.91■□□□□ 0.62
SNX3-201ENST00000230085 PEX14O75381 377 aa18.91■□□□□ 0.62
SNX3-201ENST00000230085 F3P13726 295 aa18.91■□□□□ 0.62
SNX3-201ENST00000230085 RAB3BP20337 219 aa18.91■□□□□ 0.62
SNX3-201ENST00000230085 HIST1H1TP22492 207 aaPredicted RBP18.91■□□□□ 0.62
SNX3-201ENST00000230085 SLC2A5P22732 501 aa18.91■□□□□ 0.62
SNX3-201ENST00000230085 GIFP27352 417 aa18.91■□□□□ 0.62
SNX3-201ENST00000230085 MPIP34949 423 aa18.91■□□□□ 0.62
SNX3-201ENST00000230085 GPR4P46093 362 aa18.91■□□□□ 0.62
SNX3-201ENST00000230085 MECP2P51608 486 aaKnown RBP18.91■□□□□ 0.62
SNX3-201ENST00000230085 RAB14P61106 215 aa18.91■□□□□ 0.62
SNX3-201ENST00000230085 FOXK2Q01167 660 aa18.91■□□□□ 0.62
SNX3-201ENST00000230085 DBX2Q6ZNG2 339 aa18.91■□□□□ 0.62
SNX3-201ENST00000230085 GKN2Q86XP6 184 aa18.91■□□□□ 0.62
SNX3-201ENST00000230085 SFTPA2Q8IWL1 248 aa18.91■□□□□ 0.62
SNX3-201ENST00000230085 RAB42Q8N4Z0 105 aa18.91■□□□□ 0.62
SNX3-201ENST00000230085 SRFBP1Q8NEF9 429 aaKnown RBP18.91■□□□□ 0.62
SNX3-201ENST00000230085 OR52L1Q8NGH7 329 aa18.91■□□□□ 0.62
SNX3-201ENST00000230085 ERMAPQ96PL5 475 aaPredicted RBP18.91■□□□□ 0.62
SNX3-201ENST00000230085 ARPC5LQ9BPX5 153 aa18.91■□□□□ 0.62
SNX3-201ENST00000230085 ZNF436Q9C0F3 470 aaPredicted RBP18.91■□□□□ 0.62
SNX3-201ENST00000230085 OR52D1Q9H346 318 aa18.91■□□□□ 0.62
SNX3-201ENST00000230085 NPDC1Q9NQX5 325 aaPredicted RBP18.91■□□□□ 0.62
SNX3-201ENST00000230085 TMEM5Q9Y2B1 443 aa18.91■□□□□ 0.62
SNX3-201ENST00000230085 A0A1B0GUH1 482 aa18.91■□□□□ 0.62
SNX3-201ENST00000230085 FEZF1A0PJY2 475 aa18.91■□□□□ 0.62
SNX3-201ENST00000230085 TRIM77I1YAP6 450 aa18.91■□□□□ 0.62
SNX3-201ENST00000230085 CDC42EP2O14613 210 aa18.91■□□□□ 0.62
SNX3-201ENST00000230085 OGG1O15527 345 aa18.91■□□□□ 0.62
SNX3-201ENST00000230085 LCMT2O60294 686 aaKnown RBP18.91■□□□□ 0.62
SNX3-201ENST00000230085 GATBO75879 557 aaKnown RBP18.91■□□□□ 0.62
SNX3-201ENST00000230085 SLC2A10O95528 541 aa18.91■□□□□ 0.62
SNX3-201ENST00000230085 CD59P13987 128 aa18.91■□□□□ 0.62
SNX3-201ENST00000230085 CPN1P15169 458 aa18.91■□□□□ 0.62
SNX3-201ENST00000230085 TBXA2RP21731 343 aa18.91■□□□□ 0.62
SNX3-201ENST00000230085 ENPP1P22413 925 aa18.91■□□□□ 0.62
SNX3-201ENST00000230085 FXYD6P3P58550 94 aa18.91■□□□□ 0.62
SNX3-201ENST00000230085 PLBD1Q6P4A8 553 aa18.91■□□□□ 0.62
SNX3-201ENST00000230085 ABHD17CQ6PCB6 329 aa18.91■□□□□ 0.62
SNX3-201ENST00000230085 FRRS1Q6ZNA5 592 aa18.91■□□□□ 0.62
SNX3-201ENST00000230085 TMPRSS11FQ6ZWK6 438 aa18.91■□□□□ 0.62
SNX3-201ENST00000230085 KRT74Q7RTS7 529 aa18.91■□□□□ 0.62
SNX3-201ENST00000230085 OLIG3Q7RTU3 272 aa18.91■□□□□ 0.62
SNX3-201ENST00000230085 OVCH1Q7RTY7 1134 aa18.91■□□□□ 0.62
SNX3-201ENST00000230085 SZRD1Q7Z422 152 aa18.91■□□□□ 0.62
SNX3-201ENST00000230085 CEACAM19Q7Z692 300 aa18.91■□□□□ 0.62
SNX3-201ENST00000230085 MEX3DQ86XN8 651 aaKnown RBP18.91■□□□□ 0.62
SNX3-201ENST00000230085 GALNT11Q8NCW6 608 aa18.91■□□□□ 0.62
SNX3-201ENST00000230085 GIMAP1Q8WWP7 306 aa18.91■□□□□ 0.62
SNX3-201ENST00000230085 MS4A6EQ96DS6 147 aa18.91■□□□□ 0.62
SNX3-201ENST00000230085 C16orf58Q96GQ5 468 aa18.91■□□□□ 0.62
SNX3-201ENST00000230085 PRSS27Q9BQR3 290 aa18.91■□□□□ 0.62
SNX3-201ENST00000230085 PRDM9Q9NQV7 894 aa18.91■□□□□ 0.62
SNX3-201ENST00000230085 TBC1D29Q9UFV1 150 aa18.91■□□□□ 0.62
SNX3-201ENST00000230085 ZNF443Q9Y2A4 671 aaPredicted RBP18.91■□□□□ 0.62
SNX3-201ENST00000230085 PRR19A6NJB7 356 aa18.9■□□□□ 0.62
SNX3-201ENST00000230085 RCBTB2O95199 551 aa18.9■□□□□ 0.62
SNX3-201ENST00000230085 ZIC2O95409 532 aaPredicted RBP18.9■□□□□ 0.62
SNX3-201ENST00000230085 EML2O95834 649 aa18.9■□□□□ 0.62
SNX3-201ENST00000230085 SBK2P0C263 348 aa18.9■□□□□ 0.62
SNX3-201ENST00000230085 ZP1P60852 638 aa18.9■□□□□ 0.62
SNX3-201ENST00000230085 DUSP8Q13202 625 aa18.9■□□□□ 0.62
SNX3-201ENST00000230085 FGFBP1Q14512 234 aa18.9■□□□□ 0.62
SNX3-201ENST00000230085 SUZ12Q15022 739 aaKnown RBP18.9■□□□□ 0.62
SNX3-201ENST00000230085 GARNL3Q5VVW2 1013 aa18.9■□□□□ 0.62
SNX3-201ENST00000230085 PRSS42Q7Z5A4 293 aa18.9■□□□□ 0.62
SNX3-201ENST00000230085 GRAMD2AQ8IUY3 354 aa18.9■□□□□ 0.62
SNX3-201ENST00000230085 SYS1Q8N2H4 156 aa18.9■□□□□ 0.62
SNX3-201ENST00000230085 SDR16C5Q8N3Y7 309 aa18.9■□□□□ 0.62
SNX3-201ENST00000230085 NUP43Q8NFH3 380 aa18.9■□□□□ 0.62
SNX3-201ENST00000230085 OR2T4Q8NH00 348 aa18.9■□□□□ 0.62
SNX3-201ENST00000230085 HS6ST2Q96MM7 605 aa18.9■□□□□ 0.62
SNX3-201ENST00000230085 RAB11FIP5Q9BXF6 653 aa18.9■□□□□ 0.62
SNX3-201ENST00000230085 QRSL1Q9H0R6 528 aaKnown RBP18.9■□□□□ 0.62
SNX3-201ENST00000230085 PPA2Q9H2U2 334 aa18.9■□□□□ 0.62
SNX3-201ENST00000230085 POMT2Q9UKY4 750 aa18.9■□□□□ 0.62
SNX3-201ENST00000230085 SLC35A3Q9Y2D2 325 aa18.9■□□□□ 0.62
SNX3-201ENST00000230085 IGKV1-8A0A0C4DH67 115 aa18.89■□□□□ 0.61
SNX3-201ENST00000230085 TRABD2BA6NFA1 517 aa18.89■□□□□ 0.61
SNX3-201ENST00000230085 PGRMC2O15173 223 aa18.89■□□□□ 0.61
SNX3-201ENST00000230085 ARL6IP5O75915 188 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms