RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 UCHL1P09936 223 aa20.15■□□□□ 0.82
SMARCD2-201ENST00000225742 PNMTP11086 282 aa20.15■□□□□ 0.82
SMARCD2-201ENST00000225742 CAPZBP47756 277 aa20.15■□□□□ 0.82
SMARCD2-201ENST00000225742 RPS4XP62701 263 aaKnown RBP20.15■□□□□ 0.82
SMARCD2-201ENST00000225742 TP53I3Q53FA7 332 aa20.15■□□□□ 0.82
SMARCD2-201ENST00000225742 RPTNQ6XPR3 784 aa20.15■□□□□ 0.82
SMARCD2-201ENST00000225742 SMRP1Q8NCR6 262 aa20.15■□□□□ 0.82
SMARCD2-201ENST00000225742 NPEPL1Q8NDH3 523 aa20.15■□□□□ 0.82
SMARCD2-201ENST00000225742 FAM71CQ8NEG0 241 aa20.15■□□□□ 0.82
SMARCD2-201ENST00000225742 SNX33Q8WV41 574 aa20.15■□□□□ 0.82
SMARCD2-201ENST00000225742 C3orf49Q96BT1 292 aa20.15■□□□□ 0.82
SMARCD2-201ENST00000225742 FYTTD1Q96QD9 318 aaKnown RBP20.15■□□□□ 0.82
SMARCD2-201ENST00000225742 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.15■□□□□ 0.82
SMARCD2-201ENST00000225742 CHRNA10Q9GZZ6 450 aa20.15■□□□□ 0.82
SMARCD2-201ENST00000225742 ERVK-19Q9WJR5 959 aa20.15■□□□□ 0.82
SMARCD2-201ENST00000225742 SLC6A5Q9Y345 797 aa20.15■□□□□ 0.82
SMARCD2-201ENST00000225742 PROS1P07225 676 aa20.14■□□□□ 0.81
SMARCD2-201ENST00000225742 RRAS2P62070 204 aaPredicted RBP20.14■□□□□ 0.81
SMARCD2-201ENST00000225742 CD83Q01151 205 aa20.14■□□□□ 0.81
SMARCD2-201ENST00000225742 TCTE1Q5JU00 501 aa20.14■□□□□ 0.81
SMARCD2-201ENST00000225742 WBP2NLQ6ICG8 309 aa20.14■□□□□ 0.81
SMARCD2-201ENST00000225742 UNQ9370/PRO34162Q6UXP9 181 aa20.14■□□□□ 0.81
SMARCD2-201ENST00000225742 LIPHQ8WWY8 451 aa20.14■□□□□ 0.81
SMARCD2-201ENST00000225742 GAS2L1Q99501 681 aaPredicted RBP20.14■□□□□ 0.81
SMARCD2-201ENST00000225742 GPR174Q9BXC1 333 aa20.14■□□□□ 0.81
SMARCD2-201ENST00000225742 KLHL1Q9NR64 748 aa20.14■□□□□ 0.81
SMARCD2-201ENST00000225742 NCDNQ9UBB6 729 aa20.14■□□□□ 0.81
SMARCD2-201ENST00000225742 TEKT2Q9UIF3 430 aa20.14■□□□□ 0.81
SMARCD2-201ENST00000225742 A0A1B0GTQ1 180 aa20.13■□□□□ 0.81
SMARCD2-201ENST00000225742 H0YIG0 161 aa20.13■□□□□ 0.81
SMARCD2-201ENST00000225742 FLRT2O43155 660 aa20.13■□□□□ 0.81
SMARCD2-201ENST00000225742 HYAL3O43820 417 aaPredicted RBP20.13■□□□□ 0.81
SMARCD2-201ENST00000225742 APEHP13798 732 aaKnown RBP20.13■□□□□ 0.81
SMARCD2-201ENST00000225742 ARSBP15848 533 aa20.13■□□□□ 0.81
SMARCD2-201ENST00000225742 GABRA4P48169 554 aa20.13■□□□□ 0.81
SMARCD2-201ENST00000225742 BTG2P78543 158 aa20.13■□□□□ 0.81
SMARCD2-201ENST00000225742 PLA1AQ53H76 456 aa20.13■□□□□ 0.81
SMARCD2-201ENST00000225742 GPR135Q8IZ08 494 aa20.13■□□□□ 0.81
SMARCD2-201ENST00000225742 MAP3K3Q99759 626 aa20.13■□□□□ 0.81
SMARCD2-201ENST00000225742 EXOSC3Q9NQT5 275 aaKnown RBP20.13■□□□□ 0.81
SMARCD2-201ENST00000225742 PAQR5Q9NXK6 330 aaPredicted RBP20.13■□□□□ 0.81
SMARCD2-201ENST00000225742 CACNG2Q9Y698 323 aa20.13■□□□□ 0.81
SMARCD2-201ENST00000225742 A0A1W2PRG6 482 aa20.13■□□□□ 0.81
SMARCD2-201ENST00000225742 SHISA7A6NL88 538 aa20.13■□□□□ 0.81
SMARCD2-201ENST00000225742 UBL3O95164 117 aa20.13■□□□□ 0.81
SMARCD2-201ENST00000225742 C1QBP02746 253 aa20.13■□□□□ 0.81
SMARCD2-201ENST00000225742 SLC25A1P53007 311 aa20.13■□□□□ 0.81
SMARCD2-201ENST00000225742 MAZP56270 477 aaKnown RBP20.13■□□□□ 0.81
SMARCD2-201ENST00000225742 ELOCQ15369 112 aa20.13■□□□□ 0.81
SMARCD2-201ENST00000225742 SLC25A35Q3KQZ1 300 aa20.13■□□□□ 0.81
SMARCD2-201ENST00000225742 IL20RBQ6UXL0 311 aa20.13■□□□□ 0.81
SMARCD2-201ENST00000225742 GLCCI1Q86VQ1 547 aa20.13■□□□□ 0.81
SMARCD2-201ENST00000225742 ARL14Q8N4G2 192 aa20.13■□□□□ 0.81
SMARCD2-201ENST00000225742 FRMD1Q8N878 549 aa20.13■□□□□ 0.81
SMARCD2-201ENST00000225742 YIPF7Q8N8F6 280 aa20.13■□□□□ 0.81
SMARCD2-201ENST00000225742 ZNF527Q8NB42 609 aa20.13■□□□□ 0.81
SMARCD2-201ENST00000225742 OR4C3Q8NH37 302 aa20.13■□□□□ 0.81
SMARCD2-201ENST00000225742 SMAP2Q8WU79 429 aaPredicted RBP20.13■□□□□ 0.81
SMARCD2-201ENST00000225742 ORAI3Q9BRQ5 295 aa20.13■□□□□ 0.81
SMARCD2-201ENST00000225742 TMEM246Q9BRR3 403 aa20.13■□□□□ 0.81
SMARCD2-201ENST00000225742 IMPA2O14732 288 aa20.12■□□□□ 0.81
SMARCD2-201ENST00000225742 GLCEO94923 617 aa20.12■□□□□ 0.81
SMARCD2-201ENST00000225742 SPI1P17947 270 aa20.12■□□□□ 0.81
SMARCD2-201ENST00000225742 MAT1AQ00266 395 aaKnown RBP20.12■□□□□ 0.81
SMARCD2-201ENST00000225742 YIF1BQ5BJH7 314 aa20.12■□□□□ 0.81
SMARCD2-201ENST00000225742 LILRB4Q8NHJ6 448 aa20.12■□□□□ 0.81
SMARCD2-201ENST00000225742 RPS4Y2Q8TD47 263 aa20.12■□□□□ 0.81
SMARCD2-201ENST00000225742 HAVCR2Q8TDQ0 301 aa20.12■□□□□ 0.81
SMARCD2-201ENST00000225742 AKAP1Q92667 903 aaKnown RBP eCLIP20.12■□□□□ 0.81
SMARCD2-201ENST00000225742 C7orf50Q9BRJ6 194 aaKnown RBP20.12■□□□□ 0.81
SMARCD2-201ENST00000225742 UBQLN4Q9NRR5 601 aa20.12■□□□□ 0.81
SMARCD2-201ENST00000225742 TRBV2A0A0J9YWF9 115 aa20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 FITM1A5D6W6 292 aa20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 OR6C70A6NIJ9 312 aa20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 ELOA3DA6NLF2 546 aaPredicted RBP20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 ZNF879B4DU55 563 aa20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 GNB5O14775 395 aa20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 SCO2O43819 266 aa20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 CDC123O75794 336 aaPredicted RBP20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 CLPSP04118 112 aa20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 IFNA16P05015 189 aa20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 EPXP11678 715 aa20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 GRK6P43250 576 aa20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 MMP15P51511 669 aa20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 PGDP52209 483 aa20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 ELOA3BQ3SY89 546 aa20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 FNDC7Q5VTL7 733 aa20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 GKN2Q86XP6 184 aa20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 PLCZ1Q86YW0 608 aa20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 LRRC17Q8N6Y2 441 aa20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 ELOA3Q8NG57 546 aa20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 ZFAND1Q8TCF1 268 aa20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 MMABQ96EY8 250 aaPredicted RBP20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 NDEL1Q9GZM8 345 aa20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 ABCG5Q9H222 651 aa20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 EPHA6Q9UF33 1036 aa20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 CAMK2AQ9UQM7 478 aa20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 PDCD5O14737 125 aa20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 EEF1E1O43324 174 aaKnown RBP20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 MAOAP21397 527 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms