RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 TMEM27Q9HBJ8 222 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 PDE7BQ9NP56 450 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 ZNF346Q9UL40 294 aaKnown RBP9.16□□□□□ -0.94
USP11-201ENST00000218348 SSR3Q9UNL2 185 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 ADAM18Q9Y3Q7 739 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 RTTNQ86VV8 2226 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 PRRC2CQ9Y520 2896 aaKnown RBP9.16□□□□□ -0.94
USP11-201ENST00000218348 A0A1B0GVC2 190 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 A6NIN4 97 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 C17orf105B2RV13 164 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 CLDN4O14493 209 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 PRODHO43272 600 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 SCG5P05408 212 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 SLC35E2P0CK97 266 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 NME1P15531 152 aaKnown RBP9.16□□□□□ -0.94
USP11-201ENST00000218348 CD1CP29017 333 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 CD40LGP29965 261 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 FXYD6P3P58550 94 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 HNRNPA0Q13151 305 aaKnown RBP9.16□□□□□ -0.94
USP11-201ENST00000218348 GALEQ14376 348 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 NCF4Q15080 339 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 PLK5Q496M5 336 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 LYPD4Q6UWN0 246 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 RPTNQ6XPR3 784 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 RASSF6Q6ZTQ3 369 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 CXXC5Q7LFL8 322 aaKnown RBP9.16□□□□□ -0.94
USP11-201ENST00000218348 OAFQ86UD1 273 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 LAX1Q8IWV1 398 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 PARP16Q8N5Y8 322 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 SIRT6Q8N6T7 355 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 OR52L1Q8NGH7 329 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 OR4K13Q8NH42 304 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 C9orf43Q8TAL5 461 aaPredicted RBP9.16□□□□□ -0.94
USP11-201ENST00000218348 LRFN3Q9BTN0 628 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 AHCTF1Q8WYP5 2266 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 SURF4O15260 269 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 BRINP1O60477 761 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 TSC22D2O75157 780 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 CSTAP01040 98 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 SOX6P35712 828 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 RPL4P36578 427 aaKnown RBP9.16□□□□□ -0.94
USP11-201ENST00000218348 TALDO1P37837 337 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 NAA10P41227 235 aaPredicted RBP9.16□□□□□ -0.94
USP11-201ENST00000218348 CASP6P55212 293 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 DECR1Q16698 335 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 NDUFA9Q16795 377 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 OR5M10Q6IEU7 315 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 KIRREL2Q6UWL6 708 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 CDK20Q8IZL9 346 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 TMEM99Q8N816 258 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 SDR9C7Q8NEX9 313 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 SPRYD4Q8WW59 207 aaPredicted RBP9.16□□□□□ -0.94
USP11-201ENST00000218348 OSTF1Q92882 214 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 MOGAT1Q96PD6 335 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 ADOQ96SZ5 270 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 TAPBPLQ9BX59 468 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 OR10A5Q9H207 317 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 KLHL1Q9NR64 748 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 RPS6KB2Q9UBS0 482 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 MRPS33Q9Y291 106 aaKnown RBP9.16□□□□□ -0.94
USP11-201ENST00000218348 MED31Q9Y3C7 131 aa9.16□□□□□ -0.94
USP11-201ENST00000218348 C2orf72A6NCS6 295 aa9.15□□□□□ -0.94
USP11-201ENST00000218348 OIP5O43482 229 aa9.15□□□□□ -0.94
USP11-201ENST00000218348 NUDT14O95848 222 aa9.15□□□□□ -0.94
USP11-201ENST00000218348 AGR2O95994 175 aa9.15□□□□□ -0.94
USP11-201ENST00000218348 LIMS3P0CW19 117 aa9.15□□□□□ -0.94
USP11-201ENST00000218348 LIMS4P0CW20 117 aa9.15□□□□□ -0.94
USP11-201ENST00000218348 S1PR1P21453 382 aa9.15□□□□□ -0.94
USP11-201ENST00000218348 PAICSP22234 425 aaKnown RBP9.15□□□□□ -0.94
USP11-201ENST00000218348 EIPR1Q53HC9 387 aa9.15□□□□□ -0.94
USP11-201ENST00000218348 FAM27D1Q5T7N8 215 aa9.15□□□□□ -0.94
USP11-201ENST00000218348 STEAP3Q658P3 488 aa9.15□□□□□ -0.94
USP11-201ENST00000218348 CBLN3Q6UW01 205 aa9.15□□□□□ -0.94
USP11-201ENST00000218348 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.15□□□□□ -0.94
USP11-201ENST00000218348 PHOSPHO1Q8TCT1 267 aa9.15□□□□□ -0.94
USP11-201ENST00000218348 NUDT22Q9BRQ3 303 aa9.15□□□□□ -0.94
USP11-201ENST00000218348 DUSP22Q9NRW4 184 aa9.15□□□□□ -0.94
USP11-201ENST00000218348 COMMD3Q9UBI1 195 aa9.15□□□□□ -0.94
USP11-201ENST00000218348 PILRBQ9UKJ0 227 aa9.15□□□□□ -0.94
USP11-201ENST00000218348 CLEC4AQ9UMR7 237 aa9.15□□□□□ -0.94
USP11-201ENST00000218348 LSM2Q9Y333 95 aaKnown RBP9.15□□□□□ -0.94
USP11-201ENST00000218348 A0A1W2PRG6 482 aa9.15□□□□□ -0.94
USP11-201ENST00000218348 LOC110117498-PIK3R3F6TDL0 507 aa9.15□□□□□ -0.94
USP11-201ENST00000218348 F8W036 122 aa9.15□□□□□ -0.94
USP11-201ENST00000218348 FOLR1P15328 257 aa9.15□□□□□ -0.94
USP11-201ENST00000218348 CRYBB2P43320 205 aa9.15□□□□□ -0.94
USP11-201ENST00000218348 DHPSP49366 369 aaPredicted RBP9.15□□□□□ -0.94
USP11-201ENST00000218348 CRMP1Q14194 572 aa9.15□□□□□ -0.94
USP11-201ENST00000218348 SHBQ15464 509 aa9.15□□□□□ -0.94
USP11-201ENST00000218348 OCLNQ16625 522 aa9.15□□□□□ -0.94
USP11-201ENST00000218348 SPANXN2Q5MJ10 180 aa9.15□□□□□ -0.94
USP11-201ENST00000218348 PLA2G2CQ5R387 149 aa9.15□□□□□ -0.94
USP11-201ENST00000218348 KANSL1Q7Z3B3 1105 aa9.15□□□□□ -0.94
USP11-201ENST00000218348 ZMYND19Q96E35 227 aaPredicted RBP9.15□□□□□ -0.94
USP11-201ENST00000218348 SENP5Q96HI0 755 aaPredicted RBP9.15□□□□□ -0.94
USP11-201ENST00000218348 SNX18Q96RF0 628 aa9.15□□□□□ -0.94
USP11-201ENST00000218348 DPYSL5Q9BPU6 564 aa9.15□□□□□ -0.94
USP11-201ENST00000218348 IFT46Q9NQC8 304 aa9.15□□□□□ -0.94
USP11-201ENST00000218348 TXNL4BQ9NX01 149 aaKnown RBP9.15□□□□□ -0.94
USP11-201ENST00000218348 TNFRSF10DQ9UBN6 386 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms