RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 LMF2Q9BU23 707 aaKnown RBP13.71□□□□□ -0.21
SPTLC2-201ENST00000216484 OPN1LWP04000 364 aa13.71□□□□□ -0.21
SPTLC2-201ENST00000216484 VWA1Q6PCB0 445 aa13.71□□□□□ -0.21
SPTLC2-201ENST00000216484 SERINC5Q86VE9 423 aa13.71□□□□□ -0.21
SPTLC2-201ENST00000216484 ZCCHC4Q9H5U6 513 aa13.71□□□□□ -0.21
SPTLC2-201ENST00000216484 NRXN1Q9ULB1 1477 aa13.71□□□□□ -0.21
SPTLC2-201ENST00000216484 OR5K4A6NMS3 321 aa13.71□□□□□ -0.21
SPTLC2-201ENST00000216484 RAP2BP61225 183 aa13.71□□□□□ -0.21
SPTLC2-201ENST00000216484 GLYR1Q49A26 553 aaPredicted RBP13.71□□□□□ -0.21
SPTLC2-201ENST00000216484 SEC22AQ96IW7 307 aa13.71□□□□□ -0.21
SPTLC2-201ENST00000216484 SHARPINQ9H0F6 387 aa13.71□□□□□ -0.21
SPTLC2-201ENST00000216484 NOCTQ9UK39 431 aaKnown RBP13.71□□□□□ -0.21
SPTLC2-201ENST00000216484 NACAE9PAV3 2078 aa13.71□□□□□ -0.21
SPTLC2-201ENST00000216484 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.71□□□□□ -0.22
SPTLC2-201ENST00000216484 AQP7P3A6NL99 342 aa13.71□□□□□ -0.22
SPTLC2-201ENST00000216484 SBK2P0C263 348 aa13.71□□□□□ -0.22
SPTLC2-201ENST00000216484 THNSL2Q86YJ6 484 aa13.71□□□□□ -0.22
SPTLC2-201ENST00000216484 TMEM139Q8IV31 216 aa13.71□□□□□ -0.22
SPTLC2-201ENST00000216484 SCCPDHQ8NBX0 429 aa13.71□□□□□ -0.22
SPTLC2-201ENST00000216484 MS4A4EQ96PG1 132 aa13.71□□□□□ -0.22
SPTLC2-201ENST00000216484 POFUT1Q9H488 388 aa13.71□□□□□ -0.22
SPTLC2-201ENST00000216484 STYXL1Q9Y6J8 313 aa13.71□□□□□ -0.22
SPTLC2-201ENST00000216484 IL1RNP18510 177 aa13.71□□□□□ -0.22
SPTLC2-201ENST00000216484 C6orf89Q6UWU4 347 aa13.71□□□□□ -0.22
SPTLC2-201ENST00000216484 Q6ZRG5 221 aa13.71□□□□□ -0.22
SPTLC2-201ENST00000216484 CATSPERDQ86XM0 798 aa13.71□□□□□ -0.22
SPTLC2-201ENST00000216484 C2CD4CQ8TF44 421 aa13.71□□□□□ -0.22
SPTLC2-201ENST00000216484 ZNF689Q96CS4 500 aaPredicted RBP13.71□□□□□ -0.22
SPTLC2-201ENST00000216484 ZNF845Q96IR2 970 aaPredicted RBP13.71□□□□□ -0.22
SPTLC2-201ENST00000216484 AHCTF1Q8WYP5 2266 aa13.71□□□□□ -0.22
SPTLC2-201ENST00000216484 M0R3H8 397 aa13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 PHF1O43189 567 aaPredicted RBP13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 UBE2IP63279 158 aaKnown RBP13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 MSS51Q4VC12 460 aa13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 ZDHHC24Q6UX98 284 aa13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 MFSD6LQ8IWD5 586 aa13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 NMNAT1Q9HAN9 279 aaPredicted RBP13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 ZNF17P17021 662 aa13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 ERVFC1P60507 584 aa13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 PCBD1P61457 104 aa13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 LYPD4Q6UWN0 246 aa13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 SMAP2Q8WU79 429 aaPredicted RBP13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 ZNF317Q96PQ6 595 aaPredicted RBP13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 EGFP01133 1207 aa13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 HLCSP50747 726 aa13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 ATP1B3P54709 279 aa13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 RNF141Q8WVD5 230 aa13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 ANKRD19PQ9H560 264 aa13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 NGBQ9NPG2 151 aa13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 MT-ND4LP03901 98 aa13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 GM2AP17900 193 aa13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 FOLR3P41439 243 aa13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 RPS5P46782 204 aaKnown RBP13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 ELLP55199 621 aaPredicted RBP13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 ILKQ13418 452 aa13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 ZNF468Q5VIY5 522 aaPredicted RBP13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 KCNJ15Q99712 375 aa13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 DISP1Q96F81 1524 aa13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 FER1L4A9Z1Z3 1794 aa13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 ARHGAP33O14559 1287 aa13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 HEXAP06865 529 aa13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 SMPD1P17405 629 aa13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 P2RX3P56373 397 aa13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 LY6G5CQ5SRR4 150 aa13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 OR5H6Q8NGV6 325 aa13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 YIPF5Q969M3 257 aa13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 MUL1Q969V5 352 aa13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 AMDHD1Q96NU7 426 aa13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 VWDEQ8N2E2 1590 aa13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 PMP2P02689 132 aa13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 CNR1P21554 472 aa13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 HNRNPA3P51991 378 aaKnown RBP13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 ZNF266Q14584 549 aa13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 FAM110CQ1W6H9 321 aa13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 SLC35G3Q8N808 338 aa13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 NOL4LQ96MY1 436 aaPredicted RBP13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 LPAR4Q99677 370 aa13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 C1orf198Q9H425 327 aa13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 WIF1Q9Y5W5 379 aa13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 OR6C76A6NM76 312 aa13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 RPA2P15927 270 aa13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 CPOXP36551 454 aa13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 CEP170BQ9Y4F5 1589 aaPredicted RBP13.7□□□□□ -0.22
SPTLC2-201ENST00000216484 SIX6O95475 246 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 MEOX1P50221 254 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 CDK5R2Q13319 367 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 PLAG1Q6DJT9 500 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 TRNP1Q6NT89 227 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 UBAC2Q8NBM4 344 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 WDR92Q96MX6 357 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 SLC29A1Q99808 456 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 RTP3Q9BQQ7 232 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 LEFTY2O00292 366 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 GIPRP48546 466 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 RAB33AQ14088 237 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 KCTD11Q693B1 232 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 Q6ZVL8 140 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 OR11L1Q8NGX0 322 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 MOCOSQ96EN8 888 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 SUSD3Q96L08 255 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms