RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 PPIL3Q9H2H8 161 aaKnown RBP5.7□□□□□ -1.5
VPS13D-201ENST00000011700 TMEM72A0PK05 275 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 TMEM221A6NGB7 291 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 PRAMEF26H0Y7S4 382 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 AIFM1O95831 613 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 COL13A1Q5TAT6 717 aaPredicted RBP5.7□□□□□ -1.5
VPS13D-201ENST00000011700 CES4AQ5XG92 561 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 FEVQ99581 238 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 PLEKHF2Q9H8W4 249 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 OSER1Q9NX31 292 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 DNAJB11Q9UBS4 358 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 KCND3Q9UK17 655 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 OR12D1P0DN82 309 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 PIPP12273 146 aaPredicted RBP5.7□□□□□ -1.5
VPS13D-201ENST00000011700 HCCSP53701 268 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 RAET1LQ5VY80 246 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 ELP2Q6IA86 826 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 RHOXF1Q8NHV9 184 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 DVL3Q92997 716 aaPredicted RBP5.7□□□□□ -1.5
VPS13D-201ENST00000011700 ZBTB8AQ96BR9 441 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 LIN7CQ9NUP9 197 aaKnown RBP5.7□□□□□ -1.5
VPS13D-201ENST00000011700 RAB22AQ9UL26 194 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 MYBPHLA2RUH7 354 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 CCL16O15467 120 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 FAM155BO75949 473 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 GLCEO94923 617 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 ABCD3P28288 659 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 S100A11P31949 105 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 CDKN1CP49918 316 aaPredicted RBP5.7□□□□□ -1.5
VPS13D-201ENST00000011700 MEP1AQ16819 746 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 FUNDC1Q8IVP5 155 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 ZNF679Q8IYX0 411 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 CMTM8Q8IZV2 173 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 OR2A14Q96R47 310 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 TMEM59Q9BXS4 323 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 DPH1Q9BZG8 443 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 EXOSC3Q9NQT5 275 aaKnown RBP5.7□□□□□ -1.5
VPS13D-201ENST00000011700 MED13LQ71F56 2210 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 SCGB1D1O95968 90 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 GNB3P16520 340 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 IQCJQ1A5X6 159 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 OR6K2Q8NGY2 324 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 NETO1Q8TDF5 533 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 ARNT2Q9HBZ2 717 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 ZNF160Q9HCG1 818 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 SLC2A6Q9UGQ3 507 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 LOC730098B7Z3J9 87 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 SPINT2O43291 252 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 PLATP00750 562 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 CALCBP10092 127 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 ADRA2CP18825 462 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 MAGP20916 626 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 SPINT3P49223 89 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 UBE2KP61086 200 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 ILKQ13418 452 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 LRIT3Q3SXY7 679 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 LRRC73Q5JTD7 316 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 ABI3BPQ7Z7G0 1075 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 ADGRE4PQ86SQ3 457 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 LSRQ86X29 649 aaPredicted RBP5.69□□□□□ -1.5
VPS13D-201ENST00000011700 TMEM185AQ8NFB2 350 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 NXPE3Q969Y0 559 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 ELF4Q99607 663 aaPredicted RBP5.69□□□□□ -1.5
VPS13D-201ENST00000011700 TMEM38AQ9H6F2 299 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 METTL15A6NJ78 407 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 H3BMQ9 156 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 FGF3P11487 239 aaPredicted RBP5.69□□□□□ -1.5
VPS13D-201ENST00000011700 GSK3AP49840 483 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 RAG2P55895 527 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 IRF9Q00978 393 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 Q499Y3 187 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 NXNL2Q5VZ03 156 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 AADACL2Q6P093 401 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 SSX9Q7RTT3 188 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 KLBQ86Z14 1044 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 ENTHD1Q8IYW4 607 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 PINX1Q96BK5 328 aaKnown RBP5.69□□□□□ -1.5
VPS13D-201ENST00000011700 ZNF300Q96RE9 604 aaPredicted RBP5.69□□□□□ -1.5
VPS13D-201ENST00000011700 TMEM43Q9BTV4 400 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 BARHL1Q9BZE3 327 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 OR8D2Q9GZM6 311 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 NRIP3Q9NQ35 241 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 OLAHQ9NV23 265 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 FKBP11Q9NYL4 201 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 GALPQ9UBC7 116 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 POLDIP2Q9Y2S7 368 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 FCF1Q9Y324 198 aaKnown RBP5.69□□□□□ -1.5
VPS13D-201ENST00000011700 SIAH2O43255 324 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 ADAM11O75078 769 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 TMEM225BP0DP42 221 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 SFTPDP35247 375 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 TNFRSF4P43489 277 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 SLC35F2Q8IXU6 374 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 PLPP6Q8IY26 295 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 OR4K5Q8NGD3 323 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 OR13C8Q8NGS7 320 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 FIBINQ8TAL6 211 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 SYNPRQ8TBG9 265 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 FAM122AQ96E09 287 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 C20orf85Q9H1P6 137 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms