RNA–Protein interactions for RNA: ENST00000642089.1

SAMMSON-226, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,582 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-226ENST00000642089 TMEM200AQ86VY9 491 aa4.4□□□□□ -1.7
SAMMSON-226ENST00000642089 MRPL41Q8IXM3 137 aaKnown RBP4.4□□□□□ -1.7
SAMMSON-226ENST00000642089 ZZZ3Q8IYH5 903 aa4.4□□□□□ -1.7
SAMMSON-226ENST00000642089 LRRC34Q8IZ02 419 aa4.4□□□□□ -1.7
SAMMSON-226ENST00000642089 LILRA2Q8N149 483 aa4.4□□□□□ -1.7
SAMMSON-226ENST00000642089 TRIML2Q8N7C3 387 aa4.4□□□□□ -1.7
SAMMSON-226ENST00000642089 ATG16L2Q8NAA4 619 aa4.4□□□□□ -1.7
SAMMSON-226ENST00000642089 SMYD1Q8NB12 490 aa4.4□□□□□ -1.7
SAMMSON-226ENST00000642089 POC1BQ8TC44 478 aa4.4□□□□□ -1.7
SAMMSON-226ENST00000642089 ZPLD1Q8TCW7 415 aa4.4□□□□□ -1.7
SAMMSON-226ENST00000642089 NEURL3Q96EH8 262 aa4.4□□□□□ -1.7
SAMMSON-226ENST00000642089 ITCHQ96J02 903 aa4.4□□□□□ -1.7
SAMMSON-226ENST00000642089 MAGEB18Q96M61 343 aa4.4□□□□□ -1.7
SAMMSON-226ENST00000642089 HOXD1Q9GZZ0 328 aa4.4□□□□□ -1.7
SAMMSON-226ENST00000642089 RMND5AQ9H871 391 aa4.4□□□□□ -1.7
SAMMSON-226ENST00000642089 CALHM2Q9HA72 323 aa4.4□□□□□ -1.7
SAMMSON-226ENST00000642089 SDR39U1Q9NRG7 319 aaPredicted RBP4.4□□□□□ -1.7
SAMMSON-226ENST00000642089 DNAJB12Q9NXW2 375 aaKnown RBP4.4□□□□□ -1.7
SAMMSON-226ENST00000642089 FRRS1LQ9P0K9 344 aa4.4□□□□□ -1.7
SAMMSON-226ENST00000642089 SLAMF8Q9P0V8 285 aa4.4□□□□□ -1.7
SAMMSON-226ENST00000642089 ICAM5Q9UMF0 924 aa4.4□□□□□ -1.7
SAMMSON-226ENST00000642089 TRIM33Q9UPN9 1127 aa4.4□□□□□ -1.7
SAMMSON-226ENST00000642089 HIF3AQ9Y2N7 669 aa4.4□□□□□ -1.7
SAMMSON-226ENST00000642089 L3MBTL1Q9Y468 752 aa4.4□□□□□ -1.7
SAMMSON-226ENST00000642089 POLQO75417 2590 aa4.4□□□□□ -1.7
SAMMSON-226ENST00000642089 NBPF19A0A087WUL8 3843 aa4.4□□□□□ -1.7
SAMMSON-226ENST00000642089 PKDREJQ9NTG1 2253 aa4.4□□□□□ -1.7
SAMMSON-226ENST00000642089 IGLV3-32A0A0A0MS00 114 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 IGHV3-15A0A0B4J1V0 119 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 A0A0J9YW62 118 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 A0A1W2PQD3 144 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 MBD3L4A6NDZ8 208 aaPredicted RBP4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 MBD3L3A6NE82 208 aaPredicted RBP4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 MBD3L5A6NJ08 208 aaPredicted RBP4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 ANKRD65E5RJM6 399 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 NPIPB9F8W1W9 429 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 AP3D1O14617 1153 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 GSC2O15499 205 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 EFNA2O43921 213 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 KIAA0513O60268 411 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 EDF1O60869 148 aaKnown RBP4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 RGS9O75916 674 aaPredicted RBP4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 AQP8O94778 261 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 NTN1O95631 604 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 PLGP00747 810 aaPredicted RBP4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 BCHEP06276 602 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 CHRM4P08173 479 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 LINGO3P0C6S8 592 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 OSMP13725 252 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 CTSSP25774 331 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 TIMP3P35625 211 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 RANBP1P43487 201 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 SLC6A8P48029 635 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 KCNJ5P48544 419 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 MTNR1BP49286 362 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 ASCL1P50553 236 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 P2RX1P51575 399 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 RPS3AP61247 264 aaKnown RBP4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 MERTKQ12866 999 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 SKP2Q13309 424 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 QPRTQ15274 297 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 EXOC3L2Q2M3D2 409 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 SLC25A35Q3KQZ1 300 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 TMEM176BQ3YBM2 270 aaPredicted RBP4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 HBMQ6B0K9 141 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 HEPHL1Q6MZM0 1159 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 FRRS1Q6ZNA5 592 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 EIF3MQ7L2H7 374 aaKnown RBP4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 GDF7Q7Z4P5 450 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 GGNQ86UU5 652 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 FUNDC1Q8IVP5 155 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 ZNF619Q8N2I2 560 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 GTPBP8Q8N3Z3 284 aaPredicted RBP4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 GLB1L3Q8NCI6 653 aaPredicted RBP4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 CHDHQ8NE62 594 aaPredicted RBP4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 TOR1AIP2Q8NFQ8 470 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 OR10D3Q8NH80 312 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 GOT1L1Q8NHS2 421 aaPredicted RBP4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 MBD3L2Q8NHZ7 208 aaPredicted RBP4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 ZNF563Q8TA94 476 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 LINC01560Q8TB33 94 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 GPR119Q8TDV5 335 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 ZFP90Q8TF47 636 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 IPCEF1Q8WWN9 437 aaPredicted RBP4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 ROBO4Q8WZ75 1007 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 CNOT9Q92600 299 aaKnown RBP4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 NRGNQ92686 78 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 MAL2Q969L2 176 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 FBXW5Q969U6 566 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 ZBTB8AQ96BR9 441 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 DOCK7Q96N67 2140 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 ZNF559Q9BR84 538 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 NMUR2Q9GZQ4 415 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 FAM192AQ9GZU8 254 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 ZNF350Q9GZX5 532 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 ENKD1Q9H0I2 346 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 OPN3Q9H1Y3 402 aaPredicted RBP4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 VCX3BQ9H321 246 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 TPT1P8Q9HAU6 139 aa4.4□□□□□ -1.71
SAMMSON-226ENST00000642089 VCX3AQ9NNX9 186 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms