RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 ARL2BPQ9Y2Y0 163 aa19.43■□□□□ 0.7
SCN1B-206ENST00000638536 PRORSD1PA6NEY8 169 aa19.42■□□□□ 0.7
SCN1B-206ENST00000638536 M0R3H8 397 aa19.42■□□□□ 0.7
SCN1B-206ENST00000638536 RAMP1O60894 148 aa19.42■□□□□ 0.7
SCN1B-206ENST00000638536 PLGP00747 810 aaPredicted RBP19.42■□□□□ 0.7
SCN1B-206ENST00000638536 FESP07332 822 aa19.42■□□□□ 0.7
SCN1B-206ENST00000638536 KCNJ5P48544 419 aa19.42■□□□□ 0.7
SCN1B-206ENST00000638536 CCDC80Q76M96 950 aa19.42■□□□□ 0.7
SCN1B-206ENST00000638536 ATG4DQ86TL0 474 aaPredicted RBP19.42■□□□□ 0.7
SCN1B-206ENST00000638536 RBM45Q8IUH3 476 aaKnown RBP19.42■□□□□ 0.7
SCN1B-206ENST00000638536 TUSC5Q8IXB3 177 aa19.42■□□□□ 0.7
SCN1B-206ENST00000638536 ZNF610Q8N9Z0 462 aa19.42■□□□□ 0.7
SCN1B-206ENST00000638536 SLC35B4Q969S0 331 aa19.42■□□□□ 0.7
SCN1B-206ENST00000638536 ZNF775Q96BV0 537 aaPredicted RBP19.42■□□□□ 0.7
SCN1B-206ENST00000638536 PIGMQ9H3S5 423 aa19.42■□□□□ 0.7
SCN1B-206ENST00000638536 EFCAB1Q9HAE3 211 aa19.42■□□□□ 0.7
SCN1B-206ENST00000638536 SPIN1Q9Y657 262 aaPredicted RBP19.42■□□□□ 0.7
SCN1B-206ENST00000638536 NME4O00746 187 aa19.41■□□□□ 0.7
SCN1B-206ENST00000638536 ZNF208O43345 1280 aa19.41■□□□□ 0.7
SCN1B-206ENST00000638536 LGI1O95970 557 aa19.41■□□□□ 0.7
SCN1B-206ENST00000638536 CXCR1P25024 350 aa19.41■□□□□ 0.7
SCN1B-206ENST00000638536 NUDT2P50583 147 aa19.41■□□□□ 0.7
SCN1B-206ENST00000638536 NPTX1Q15818 432 aa19.41■□□□□ 0.7
SCN1B-206ENST00000638536 NUFIP2Q7Z417 695 aaKnown RBP19.41■□□□□ 0.7
SCN1B-206ENST00000638536 HDGFL3Q9Y3E1 203 aa19.41■□□□□ 0.7
SCN1B-206ENST00000638536 ALPK2Q86TB3 2170 aa19.41■□□□□ 0.7
SCN1B-206ENST00000638536 A0A1B0GWA3 101 aa19.4■□□□□ 0.7
SCN1B-206ENST00000638536 TMEM229AB2RXF0 380 aa19.4■□□□□ 0.7
SCN1B-206ENST00000638536 MSTNO14793 375 aa19.4■□□□□ 0.7
SCN1B-206ENST00000638536 AGTR1P30556 359 aa19.4■□□□□ 0.7
SCN1B-206ENST00000638536 SLC7A2P52569 658 aa19.4■□□□□ 0.7
SCN1B-206ENST00000638536 FAM27E3Q08E93 113 aa19.4■□□□□ 0.7
SCN1B-206ENST00000638536 PATL1Q86TB9 770 aaKnown RBP19.4■□□□□ 0.7
SCN1B-206ENST00000638536 TSPYL5Q86VY4 417 aaPredicted RBP19.4■□□□□ 0.7
SCN1B-206ENST00000638536 LSMEM1Q8N8F7 131 aa19.4■□□□□ 0.7
SCN1B-206ENST00000638536 CMTM5Q96DZ9 223 aa19.4■□□□□ 0.7
SCN1B-206ENST00000638536 ZNF300Q96RE9 604 aaPredicted RBP19.4■□□□□ 0.7
SCN1B-206ENST00000638536 PSD2Q9BQI7 771 aa19.4■□□□□ 0.7
SCN1B-206ENST00000638536 C12orf49Q9H741 205 aa19.4■□□□□ 0.7
SCN1B-206ENST00000638536 ARL8BQ9NVJ2 186 aa19.4■□□□□ 0.7
SCN1B-206ENST00000638536 FAM220BPB1ANY3 271 aa19.4■□□□□ 0.7
SCN1B-206ENST00000638536 PRKD3O94806 890 aa19.4■□□□□ 0.7
SCN1B-206ENST00000638536 PMS2P2O95744 297 aa19.4■□□□□ 0.7
SCN1B-206ENST00000638536 CLK1P49759 484 aaKnown RBP19.4■□□□□ 0.7
SCN1B-206ENST00000638536 CTBP2P56545 445 aa19.4■□□□□ 0.7
SCN1B-206ENST00000638536 RGS8P57771 180 aaPredicted RBP19.4■□□□□ 0.7
SCN1B-206ENST00000638536 EGR4Q05215 589 aa19.4■□□□□ 0.7
SCN1B-206ENST00000638536 CCDC103Q8IW40 242 aa19.4■□□□□ 0.7
SCN1B-206ENST00000638536 SLC30A8Q8IWU4 369 aa19.4■□□□□ 0.7
SCN1B-206ENST00000638536 OR2T12Q8NG77 320 aa19.4■□□□□ 0.7
SCN1B-206ENST00000638536 OR52E4Q8NGH9 312 aa19.4■□□□□ 0.7
SCN1B-206ENST00000638536 OR6T1Q8NGN1 323 aa19.4■□□□□ 0.7
SCN1B-206ENST00000638536 DDIT4LQ96D03 193 aa19.4■□□□□ 0.7
SCN1B-206ENST00000638536 ARHGDIGQ99819 225 aa19.4■□□□□ 0.7
SCN1B-206ENST00000638536 PLSCR4Q9NRQ2 329 aa19.4■□□□□ 0.7
SCN1B-206ENST00000638536 TMEM181Q9P2C4 612 aa19.4■□□□□ 0.7
SCN1B-206ENST00000638536 ADAM21Q9UKJ8 722 aa19.4■□□□□ 0.7
SCN1B-206ENST00000638536 EMC9Q9Y3B6 208 aa19.4■□□□□ 0.7
SCN1B-206ENST00000638536 CYTIPO60759 359 aa19.39■□□□□ 0.69
SCN1B-206ENST00000638536 CD8BP10966 210 aa19.39■□□□□ 0.69
SCN1B-206ENST00000638536 TNFRSF1BP20333 461 aa19.39■□□□□ 0.69
SCN1B-206ENST00000638536 EDNRAP25101 427 aa19.39■□□□□ 0.69
SCN1B-206ENST00000638536 PRDX6P30041 224 aa19.39■□□□□ 0.69
SCN1B-206ENST00000638536 CPOXP36551 454 aa19.39■□□□□ 0.69
SCN1B-206ENST00000638536 OR2B6P58173 313 aa19.39■□□□□ 0.69
SCN1B-206ENST00000638536 CSNK2A1P68400 391 aaPredicted RBP19.39■□□□□ 0.69
SCN1B-206ENST00000638536 LIPEQ05469 1076 aa19.39■□□□□ 0.69
SCN1B-206ENST00000638536 VEZF1Q14119 521 aa19.39■□□□□ 0.69
SCN1B-206ENST00000638536 OR1Q1Q15612 314 aa19.39■□□□□ 0.69
SCN1B-206ENST00000638536 NRF1Q16656 503 aa19.39■□□□□ 0.69
SCN1B-206ENST00000638536 INTS11Q5TA45 600 aaKnown RBP19.39■□□□□ 0.69
SCN1B-206ENST00000638536 HACD2Q6Y1H2 254 aa19.39■□□□□ 0.69
SCN1B-206ENST00000638536 OR6K3Q8NGY3 331 aa19.39■□□□□ 0.69
SCN1B-206ENST00000638536 LINC01560Q8TB33 94 aa19.39■□□□□ 0.69
SCN1B-206ENST00000638536 GLRX2Q9NS18 164 aa19.39■□□□□ 0.69
SCN1B-206ENST00000638536 CRIM1Q9NZV1 1036 aa19.39■□□□□ 0.69
SCN1B-206ENST00000638536 KLHL13Q9P2N7 655 aa19.39■□□□□ 0.69
SCN1B-206ENST00000638536 PROCRQ9UNN8 238 aa19.39■□□□□ 0.69
SCN1B-206ENST00000638536 PDZD2O15018 2839 aa19.38■□□□□ 0.69
SCN1B-206ENST00000638536 SHOX2O60902 331 aaPredicted RBP19.38■□□□□ 0.69
SCN1B-206ENST00000638536 NPIPB7O75200 414 aa19.38■□□□□ 0.69
SCN1B-206ENST00000638536 PTNP21246 168 aa19.38■□□□□ 0.69
SCN1B-206ENST00000638536 FPR1P21462 350 aa19.38■□□□□ 0.69
SCN1B-206ENST00000638536 FKBP2P26885 142 aaKnown RBP19.38■□□□□ 0.69
SCN1B-206ENST00000638536 H3F3AP84243 136 aa19.38■□□□□ 0.69
SCN1B-206ENST00000638536 RASGEF1BQ0VAM2 473 aa19.38■□□□□ 0.69
SCN1B-206ENST00000638536 RNPS1Q15287 305 aaKnown RBP19.38■□□□□ 0.69
SCN1B-206ENST00000638536 EEF1A1P5Q5VTE0 462 aa19.38■□□□□ 0.69
SCN1B-206ENST00000638536 GTF2IRD2BQ6EKJ0 949 aa19.38■□□□□ 0.69
SCN1B-206ENST00000638536 GTF2IRD2Q86UP8 949 aa19.38■□□□□ 0.69
SCN1B-206ENST00000638536 P3H2Q8IVL5 708 aa19.38■□□□□ 0.69
SCN1B-206ENST00000638536 MICU2Q8IYU8 434 aa19.38■□□□□ 0.69
SCN1B-206ENST00000638536 BHLHE22Q8NFJ8 381 aaPredicted RBP19.38■□□□□ 0.69
SCN1B-206ENST00000638536 VANGL1Q8TAA9 524 aaPredicted RBP19.38■□□□□ 0.69
SCN1B-206ENST00000638536 LRRC37BQ96QE4 947 aa19.38■□□□□ 0.69
SCN1B-206ENST00000638536 HOPXQ9BPY8 73 aaPredicted RBP19.38■□□□□ 0.69
SCN1B-206ENST00000638536 KLHL28Q9NXS3 571 aa19.38■□□□□ 0.69
SCN1B-206ENST00000638536 TRAPPC4Q9Y296 219 aa19.38■□□□□ 0.69
SCN1B-206ENST00000638536 FAM107AO95990 144 aa19.37■□□□□ 0.69
SCN1B-206ENST00000638536 NTF4P34130 210 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms