RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 WBP2NLQ6ICG8 309 aa19.69■□□□□ 0.74
CLN6-224ENST00000638076 XKRXQ6PP77 449 aa19.69■□□□□ 0.74
CLN6-224ENST00000638076 ARL9Q6T311 187 aa19.69■□□□□ 0.74
CLN6-224ENST00000638076 SLITRK4Q8IW52 837 aa19.69■□□□□ 0.74
CLN6-224ENST00000638076 GPALPP1Q8IXQ4 340 aa19.69■□□□□ 0.74
CLN6-224ENST00000638076 CARFQ8N187 725 aa19.69■□□□□ 0.74
CLN6-224ENST00000638076 ZNF721Q8TF20 911 aa19.69■□□□□ 0.74
CLN6-224ENST00000638076 ITPKCQ96DU7 683 aa19.69■□□□□ 0.74
CLN6-224ENST00000638076 ZMYND19Q96E35 227 aaPredicted RBP19.69■□□□□ 0.74
CLN6-224ENST00000638076 LCORQ96JN0 433 aaPredicted RBP19.69■□□□□ 0.74
CLN6-224ENST00000638076 GAL3ST4Q96RP7 486 aa19.69■□□□□ 0.74
CLN6-224ENST00000638076 ATF6BQ99941 703 aa19.69■□□□□ 0.74
CLN6-224ENST00000638076 KCNN2Q9H2S1 579 aa19.69■□□□□ 0.74
CLN6-224ENST00000638076 KLHL21Q9UJP4 597 aa19.69■□□□□ 0.74
CLN6-224ENST00000638076 IGKV1D-42A0A075B6H8 117 aa19.69■□□□□ 0.74
CLN6-224ENST00000638076 FRG2CA6NGY1 282 aa19.69■□□□□ 0.74
CLN6-224ENST00000638076 ELOA3DA6NLF2 546 aaPredicted RBP19.69■□□□□ 0.74
CLN6-224ENST00000638076 SNPHO15079 494 aa19.69■□□□□ 0.74
CLN6-224ENST00000638076 OR7A10O76100 309 aa19.69■□□□□ 0.74
CLN6-224ENST00000638076 DDAH2O95865 285 aa19.69■□□□□ 0.74
CLN6-224ENST00000638076 OR12D2P58182 307 aa19.69■□□□□ 0.74
CLN6-224ENST00000638076 CARTPTQ16568 116 aa19.69■□□□□ 0.74
CLN6-224ENST00000638076 ELOA3BQ3SY89 546 aa19.69■□□□□ 0.74
CLN6-224ENST00000638076 ELOA3Q8NG57 546 aa19.69■□□□□ 0.74
CLN6-224ENST00000638076 OR51L1Q8NGJ5 315 aa19.69■□□□□ 0.74
CLN6-224ENST00000638076 SETD6Q8TBK2 473 aa19.69■□□□□ 0.74
CLN6-224ENST00000638076 LRFN5Q96NI6 719 aa19.69■□□□□ 0.74
CLN6-224ENST00000638076 ERVMER34-1Q9H9K5 563 aa19.69■□□□□ 0.74
CLN6-224ENST00000638076 ENAMQ9NRM1 1142 aa19.69■□□□□ 0.74
CLN6-224ENST00000638076 SACM1LQ9NTJ5 587 aa19.69■□□□□ 0.74
CLN6-224ENST00000638076 WDR70Q9NW82 654 aa19.69■□□□□ 0.74
CLN6-224ENST00000638076 ACTC1P68032 377 aa19.68■□□□□ 0.74
CLN6-224ENST00000638076 ACTA1P68133 377 aa19.68■□□□□ 0.74
CLN6-224ENST00000638076 DPY19L2P2Q6ZN68 376 aa19.68■□□□□ 0.74
CLN6-224ENST00000638076 SPATC1Q76KD6 591 aa19.68■□□□□ 0.74
CLN6-224ENST00000638076 VASH1Q7L8A9 365 aaPredicted RBP19.68■□□□□ 0.74
CLN6-224ENST00000638076 SSX6Q7RTT6 188 aa19.68■□□□□ 0.74
CLN6-224ENST00000638076 PRR22Q8IZ63 422 aa19.68■□□□□ 0.74
CLN6-224ENST00000638076 ADIPOR1Q96A54 375 aa19.68■□□□□ 0.74
CLN6-224ENST00000638076 ADOQ96SZ5 270 aa19.68■□□□□ 0.74
CLN6-224ENST00000638076 SLC19A3Q9BZV2 496 aa19.68■□□□□ 0.74
CLN6-224ENST00000638076 ZNF304Q9HCX3 659 aa19.68■□□□□ 0.74
CLN6-224ENST00000638076 TMCC2O75069 709 aa19.68■□□□□ 0.74
CLN6-224ENST00000638076 FBLP22087 321 aaKnown RBP19.68■□□□□ 0.74
CLN6-224ENST00000638076 HCCSP53701 268 aa19.68■□□□□ 0.74
CLN6-224ENST00000638076 PPP3R1P63098 170 aa19.68■□□□□ 0.74
CLN6-224ENST00000638076 E2F1Q01094 437 aa19.68■□□□□ 0.74
CLN6-224ENST00000638076 MADCAM1Q13477 382 aa19.68■□□□□ 0.74
CLN6-224ENST00000638076 PRSS58Q8IYP2 241 aa19.68■□□□□ 0.74
CLN6-224ENST00000638076 A0A1W2PQ09 198 aa19.67■□□□□ 0.74
CLN6-224ENST00000638076 ZNF264O43296 627 aa19.67■□□□□ 0.74
CLN6-224ENST00000638076 PLPP2O43688 288 aa19.67■□□□□ 0.74
CLN6-224ENST00000638076 GIMD1P0DJR0 217 aa19.67■□□□□ 0.74
CLN6-224ENST00000638076 EIF2B2P49770 351 aaKnown RBP19.67■□□□□ 0.74
CLN6-224ENST00000638076 ZP2Q05996 745 aa19.67■□□□□ 0.74
CLN6-224ENST00000638076 ELAVL1Q15717 326 aaKnown RBP19.67■□□□□ 0.74
CLN6-224ENST00000638076 C1orf189Q5VU69 101 aa19.67■□□□□ 0.74
CLN6-224ENST00000638076 NRARPQ7Z6K4 114 aa19.67■□□□□ 0.74
CLN6-224ENST00000638076 ATG4DQ86TL0 474 aaPredicted RBP19.67■□□□□ 0.74
CLN6-224ENST00000638076 GHDCQ8N2G8 530 aa19.67■□□□□ 0.74
CLN6-224ENST00000638076 RFLNBQ8N5W9 214 aa19.67■□□□□ 0.74
CLN6-224ENST00000638076 CELF2-AS1Q8N7Q2 184 aa19.67■□□□□ 0.74
CLN6-224ENST00000638076 SLC41A2Q96JW4 573 aa19.67■□□□□ 0.74
CLN6-224ENST00000638076 NMNAT3Q96T66 252 aa19.67■□□□□ 0.74
CLN6-224ENST00000638076 NUDT9Q9BW91 350 aa19.67■□□□□ 0.74
CLN6-224ENST00000638076 TTTY10Q9BZA0 68 aa19.67■□□□□ 0.74
CLN6-224ENST00000638076 NRSN2Q9GZP1 204 aa19.67■□□□□ 0.74
CLN6-224ENST00000638076 RNF32Q9H0A6 362 aa19.67■□□□□ 0.74
CLN6-224ENST00000638076 SDK1Q7Z5N4 2213 aa19.67■□□□□ 0.74
CLN6-224ENST00000638076 TCRBV16S1A1N1A0A5B0 115 aa19.67■□□□□ 0.74
CLN6-224ENST00000638076 HPGDSO60760 199 aa19.67■□□□□ 0.74
CLN6-224ENST00000638076 PNMTP11086 282 aa19.67■□□□□ 0.74
CLN6-224ENST00000638076 RPS4XP62701 263 aaKnown RBP19.67■□□□□ 0.74
CLN6-224ENST00000638076 GPLD1P80108 840 aa19.67■□□□□ 0.74
CLN6-224ENST00000638076 SLC3A1Q07837 685 aa19.67■□□□□ 0.74
CLN6-224ENST00000638076 DMWDQ09019 674 aa19.67■□□□□ 0.74
CLN6-224ENST00000638076 NSDHLQ15738 373 aa19.67■□□□□ 0.74
CLN6-224ENST00000638076 WDR45BQ5MNZ6 344 aa19.67■□□□□ 0.74
CLN6-224ENST00000638076 RPTNQ6XPR3 784 aa19.67■□□□□ 0.74
CLN6-224ENST00000638076 OIT3Q8WWZ8 545 aa19.67■□□□□ 0.74
CLN6-224ENST00000638076 NRIP3Q9NQ35 241 aa19.67■□□□□ 0.74
CLN6-224ENST00000638076 EXOSC3Q9NQT5 275 aaKnown RBP19.67■□□□□ 0.74
CLN6-224ENST00000638076 KLHL1Q9NR64 748 aa19.67■□□□□ 0.74
CLN6-224ENST00000638076 MRTO4Q9UKD2 239 aaKnown RBP19.67■□□□□ 0.74
CLN6-224ENST00000638076 CDC14CA4D256 554 aa19.66■□□□□ 0.74
CLN6-224ENST00000638076 K7ESF4 209 aa19.66■□□□□ 0.74
CLN6-224ENST00000638076 TFP02787 698 aa19.66■□□□□ 0.74
CLN6-224ENST00000638076 DCNP07585 359 aaKnown RBP19.66■□□□□ 0.74
CLN6-224ENST00000638076 F8A1P23610 371 aa19.66■□□□□ 0.74
CLN6-224ENST00000638076 CXCL12P48061 93 aa19.66■□□□□ 0.74
CLN6-224ENST00000638076 TAS2R43P59537 309 aa19.66■□□□□ 0.74
CLN6-224ENST00000638076 ERVK-25P63136 954 aa19.66■□□□□ 0.74
CLN6-224ENST00000638076 TAB1Q15750 504 aa19.66■□□□□ 0.74
CLN6-224ENST00000638076 C17orf47Q8NEP4 570 aa19.66■□□□□ 0.74
CLN6-224ENST00000638076 OR5J2Q8NH18 312 aa19.66■□□□□ 0.74
CLN6-224ENST00000638076 ZNF524Q96C55 264 aa19.66■□□□□ 0.74
CLN6-224ENST00000638076 RNF31Q96EP0 1072 aa19.66■□□□□ 0.74
CLN6-224ENST00000638076 DPYSL5Q9BPU6 564 aa19.66■□□□□ 0.74
CLN6-224ENST00000638076 PCDHGB2Q9Y5G2 931 aa19.66■□□□□ 0.74
CLN6-224ENST00000638076 ASXL3Q9C0F0 2248 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms