RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 MCIDASD6RGH6 385 aa18.04■□□□□ 0.48
PCDHB11-202ENST00000624887 LRRN3E7EW58 273 aa18.04■□□□□ 0.48
PCDHB11-202ENST00000624887 ZNF264O43296 627 aa18.04■□□□□ 0.48
PCDHB11-202ENST00000624887 OR7A10O76100 309 aa18.04■□□□□ 0.48
PCDHB11-202ENST00000624887 LCN1P31025 176 aa18.04■□□□□ 0.48
PCDHB11-202ENST00000624887 HOXA6P31267 233 aa18.04■□□□□ 0.48
PCDHB11-202ENST00000624887 CDC20Q12834 499 aa18.04■□□□□ 0.48
PCDHB11-202ENST00000624887 POU4F2Q12837 409 aa18.04■□□□□ 0.48
PCDHB11-202ENST00000624887 EBPQ15125 230 aaKnown RBP18.04■□□□□ 0.48
PCDHB11-202ENST00000624887 C1orf189Q5VU69 101 aa18.04■□□□□ 0.48
PCDHB11-202ENST00000624887 CBLN3Q6UW01 205 aa18.04■□□□□ 0.48
PCDHB11-202ENST00000624887 ATG4DQ86TL0 474 aaPredicted RBP18.04■□□□□ 0.48
PCDHB11-202ENST00000624887 LAX1Q8IWV1 398 aa18.04■□□□□ 0.48
PCDHB11-202ENST00000624887 DCLRE1CQ96SD1 692 aaKnown RBP18.04■□□□□ 0.48
PCDHB11-202ENST00000624887 HDHD5Q9BXW7 423 aa18.04■□□□□ 0.48
PCDHB11-202ENST00000624887 LRRN3Q9H3W5 708 aa18.04■□□□□ 0.48
PCDHB11-202ENST00000624887 KLHL21Q9UJP4 597 aa18.04■□□□□ 0.48
PCDHB11-202ENST00000624887 CACNA1EQ15878 2313 aa18.04■□□□□ 0.48
PCDHB11-202ENST00000624887 CCDC163A0A0D9SF12 145 aa18.04■□□□□ 0.48
PCDHB11-202ENST00000624887 ELOA3DA6NLF2 546 aaPredicted RBP18.04■□□□□ 0.48
PCDHB11-202ENST00000624887 GTPBP1O00178 669 aaKnown RBP18.04■□□□□ 0.48
PCDHB11-202ENST00000624887 GABRPO00591 440 aa18.04■□□□□ 0.48
PCDHB11-202ENST00000624887 TOX3O15405 576 aaPredicted RBP18.04■□□□□ 0.48
PCDHB11-202ENST00000624887 HIST1H1CP16403 213 aaKnown RBP18.04■□□□□ 0.48
PCDHB11-202ENST00000624887 ELOA3BQ3SY89 546 aa18.04■□□□□ 0.48
PCDHB11-202ENST00000624887 LYSMD4Q5XG99 296 aa18.04■□□□□ 0.48
PCDHB11-202ENST00000624887 TSSK4Q6SA08 328 aa18.04■□□□□ 0.48
PCDHB11-202ENST00000624887 DPY19L2P2Q6ZN68 376 aa18.04■□□□□ 0.48
PCDHB11-202ENST00000624887 C9orf40Q8IXQ3 194 aa18.04■□□□□ 0.48
PCDHB11-202ENST00000624887 POC5Q8NA72 575 aa18.04■□□□□ 0.48
PCDHB11-202ENST00000624887 ELOA3Q8NG57 546 aa18.04■□□□□ 0.48
PCDHB11-202ENST00000624887 OR52E2Q8NGJ4 325 aa18.04■□□□□ 0.48
PCDHB11-202ENST00000624887 GAL3ST4Q96RP7 486 aa18.04■□□□□ 0.48
PCDHB11-202ENST00000624887 ADOQ96SZ5 270 aa18.04■□□□□ 0.48
PCDHB11-202ENST00000624887 VN1R1Q9GZP7 353 aa18.04■□□□□ 0.48
PCDHB11-202ENST00000624887 POLHQ9Y253 713 aa18.04■□□□□ 0.48
PCDHB11-202ENST00000624887 IER3IP1Q9Y5U9 82 aa18.04■□□□□ 0.48
PCDHB11-202ENST00000624887 FER1L5A0AVI2 2057 aa18.03■□□□□ 0.48
PCDHB11-202ENST00000624887 MRPL3P09001 348 aaKnown RBP18.03■□□□□ 0.48
PCDHB11-202ENST00000624887 RPS4XP62701 263 aaKnown RBP18.03■□□□□ 0.48
PCDHB11-202ENST00000624887 SIGLEC14Q08ET2 396 aa18.03■□□□□ 0.48
PCDHB11-202ENST00000624887 TMEM43Q9BTV4 400 aa18.03■□□□□ 0.48
PCDHB11-202ENST00000624887 CPNE5Q9HCH3 593 aa18.03■□□□□ 0.48
PCDHB11-202ENST00000624887 TRIM36Q9NQ86 728 aa18.03■□□□□ 0.48
PCDHB11-202ENST00000624887 MKL2Q9ULH7 1088 aa18.03■□□□□ 0.48
PCDHB11-202ENST00000624887 V9GYH0 126 aa18.03■□□□□ 0.48
PCDHB11-202ENST00000624887 TO15178 435 aa18.02■□□□□ 0.48
PCDHB11-202ENST00000624887 RNF13O43567 381 aa18.02■□□□□ 0.48
PCDHB11-202ENST00000624887 MT-ND5P03915 603 aa18.02■□□□□ 0.48
PCDHB11-202ENST00000624887 GYPBP06028 91 aa18.02■□□□□ 0.48
PCDHB11-202ENST00000624887 PNLIPP16233 465 aa18.02■□□□□ 0.48
PCDHB11-202ENST00000624887 CCR4P51679 360 aa18.02■□□□□ 0.48
PCDHB11-202ENST00000624887 AGAP7PQ5VUJ5 663 aa18.02■□□□□ 0.48
PCDHB11-202ENST00000624887 TMEM71Q6P5X7 295 aa18.02■□□□□ 0.48
PCDHB11-202ENST00000624887 MARCH9Q86YJ5 346 aa18.02■□□□□ 0.48
PCDHB11-202ENST00000624887 GPALPP1Q8IXQ4 340 aa18.02■□□□□ 0.48
PCDHB11-202ENST00000624887 PRSS58Q8IYP2 241 aa18.02■□□□□ 0.48
PCDHB11-202ENST00000624887 FAM98AQ8NCA5 519 aaKnown RBP18.02■□□□□ 0.48
PCDHB11-202ENST00000624887 SDR9C7Q8NEX9 313 aa18.02■□□□□ 0.48
PCDHB11-202ENST00000624887 OR4K13Q8NH42 304 aa18.02■□□□□ 0.48
PCDHB11-202ENST00000624887 SMPDL3BQ92485 455 aa18.02■□□□□ 0.48
PCDHB11-202ENST00000624887 AP3S1Q92572 193 aa18.02■□□□□ 0.48
PCDHB11-202ENST00000624887 DUSP23Q9BVJ7 150 aa18.02■□□□□ 0.48
PCDHB11-202ENST00000624887 NRIP3Q9NQ35 241 aa18.02■□□□□ 0.48
PCDHB11-202ENST00000624887 ZNF229Q9UJW7 825 aa18.02■□□□□ 0.48
PCDHB11-202ENST00000624887 SIRT4Q9Y6E7 314 aaPredicted RBP18.02■□□□□ 0.48
PCDHB11-202ENST00000624887 CASKO14936 926 aa18.02■□□□□ 0.47
PCDHB11-202ENST00000624887 ARPC3O15145 178 aa18.02■□□□□ 0.47
PCDHB11-202ENST00000624887 ICOSLGO75144 302 aa18.02■□□□□ 0.47
PCDHB11-202ENST00000624887 PTTG1O95997 202 aa18.02■□□□□ 0.47
PCDHB11-202ENST00000624887 EPHA8P29322 1005 aaPredicted RBP18.02■□□□□ 0.47
PCDHB11-202ENST00000624887 RPL4P36578 427 aaKnown RBP18.02■□□□□ 0.47
PCDHB11-202ENST00000624887 DHPSP49366 369 aaPredicted RBP18.02■□□□□ 0.47
PCDHB11-202ENST00000624887 PRPS1P60891 318 aa18.02■□□□□ 0.47
PCDHB11-202ENST00000624887 ACTC1P68032 377 aa18.02■□□□□ 0.47
PCDHB11-202ENST00000624887 ACTA1P68133 377 aa18.02■□□□□ 0.47
PCDHB11-202ENST00000624887 ISXQ2M1V0 245 aa18.02■□□□□ 0.47
PCDHB11-202ENST00000624887 HLA-DQA1Q5Y7H0 255 aa18.02■□□□□ 0.47
PCDHB11-202ENST00000624887 KANSL1Q7Z3B3 1105 aa18.02■□□□□ 0.47
PCDHB11-202ENST00000624887 PRR22Q8IZ63 422 aa18.02■□□□□ 0.47
PCDHB11-202ENST00000624887 OR1N1Q8NGS0 311 aa18.02■□□□□ 0.47
PCDHB11-202ENST00000624887 LIPHQ8WWY8 451 aa18.02■□□□□ 0.47
PCDHB11-202ENST00000624887 LAT2Q9GZY6 243 aa18.02■□□□□ 0.47
PCDHB11-202ENST00000624887 COPS7AQ9UBW8 275 aa18.02■□□□□ 0.47
PCDHB11-202ENST00000624887 SRPK3Q9UPE1 567 aa18.02■□□□□ 0.47
PCDHB11-202ENST00000624887 MST1P26927 711 aa18.01■□□□□ 0.47
PCDHB11-202ENST00000624887 IL12BP29460 328 aa18.01■□□□□ 0.47
PCDHB11-202ENST00000624887 ZNF85Q03923 595 aa18.01■□□□□ 0.47
PCDHB11-202ENST00000624887 SQSTM1Q13501 440 aa18.01■□□□□ 0.47
PCDHB11-202ENST00000624887 TMEM91Q6ZNR0 172 aa18.01■□□□□ 0.47
PCDHB11-202ENST00000624887 TMPRSS9Q7Z410 1059 aa18.01■□□□□ 0.47
PCDHB11-202ENST00000624887 PLPP5Q8NEB5 264 aa18.01■□□□□ 0.47
PCDHB11-202ENST00000624887 NEIL3Q8TAT5 605 aa18.01■□□□□ 0.47
PCDHB11-202ENST00000624887 GPX7Q96SL4 187 aaPredicted RBP18.01■□□□□ 0.47
PCDHB11-202ENST00000624887 NRSN2Q9GZP1 204 aa18.01■□□□□ 0.47
PCDHB11-202ENST00000624887 WWTR1Q9GZV5 400 aa18.01■□□□□ 0.47
PCDHB11-202ENST00000624887 MIXL1Q9H2W2 232 aa18.01■□□□□ 0.47
PCDHB11-202ENST00000624887 ABCB9Q9NP78 766 aa18.01■□□□□ 0.47
PCDHB11-202ENST00000624887 ADAM18Q9Y3Q7 739 aa18.01■□□□□ 0.47
PCDHB11-202ENST00000624887 VCANP13611 3396 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms