RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 KRT73Q86Y46 540 aa11.07□□□□□ -0.64
LINC00963-217ENST00000624009 GABRG1Q8N1C3 465 aa11.07□□□□□ -0.64
LINC00963-217ENST00000624009 ATP6V1C2Q8NEY4 427 aa11.07□□□□□ -0.64
LINC00963-217ENST00000624009 STEAP2Q8NFT2 490 aa11.07□□□□□ -0.64
LINC00963-217ENST00000624009 WFIKKN1Q96NZ8 548 aa11.07□□□□□ -0.64
LINC00963-217ENST00000624009 FOXC2Q99958 501 aa11.07□□□□□ -0.64
LINC00963-217ENST00000624009 CXXC4Q9H2H0 198 aa11.07□□□□□ -0.64
LINC00963-217ENST00000624009 PLEKHF2Q9H8W4 249 aa11.07□□□□□ -0.64
LINC00963-217ENST00000624009 C12orf10Q9HB07 376 aa11.07□□□□□ -0.64
LINC00963-217ENST00000624009 NPHS2Q9NP85 383 aa11.07□□□□□ -0.64
LINC00963-217ENST00000624009 SLAMF8Q9P0V8 285 aa11.07□□□□□ -0.64
LINC00963-217ENST00000624009 DCTN4Q9UJW0 460 aa11.07□□□□□ -0.64
LINC00963-217ENST00000624009 TMED7Q9Y3B3 224 aa11.07□□□□□ -0.64
LINC00963-217ENST00000624009 ZNF469Q96JG9 3925 aaPredicted RBP11.07□□□□□ -0.64
LINC00963-217ENST00000624009 NIPBLQ6KC79 2804 aaeCLIP11.07□□□□□ -0.64
LINC00963-217ENST00000624009 VPS13CQ709C8 3753 aa11.06□□□□□ -0.64
LINC00963-217ENST00000624009 PRORSD1PA6NEY8 169 aa11.06□□□□□ -0.64
LINC00963-217ENST00000624009 ANGPT2O15123 496 aa11.06□□□□□ -0.64
LINC00963-217ENST00000624009 GCM2O75603 506 aaPredicted RBP11.06□□□□□ -0.64
LINC00963-217ENST00000624009 FESP07332 822 aa11.06□□□□□ -0.64
LINC00963-217ENST00000624009 SLC6A2P23975 617 aa11.06□□□□□ -0.64
LINC00963-217ENST00000624009 TACR3P29371 465 aa11.06□□□□□ -0.64
LINC00963-217ENST00000624009 OR3A2P47893 321 aa11.06□□□□□ -0.64
LINC00963-217ENST00000624009 CDK6Q00534 326 aa11.06□□□□□ -0.64
LINC00963-217ENST00000624009 RUNDC3AQ59EK9 446 aa11.06□□□□□ -0.64
LINC00963-217ENST00000624009 ZNF311Q5JNZ3 666 aa11.06□□□□□ -0.64
LINC00963-217ENST00000624009 DHRS4L2Q6PKH6 230 aa11.06□□□□□ -0.64
LINC00963-217ENST00000624009 PAQR6Q6TCH4 344 aa11.06□□□□□ -0.64
LINC00963-217ENST00000624009 C5orf46Q6UWT4 87 aa11.06□□□□□ -0.64
LINC00963-217ENST00000624009 PAMR1Q6UXH9 720 aa11.06□□□□□ -0.64
LINC00963-217ENST00000624009 Q6ZT83 130 aa11.06□□□□□ -0.64
LINC00963-217ENST00000624009 GALNT5Q7Z7M9 940 aa11.06□□□□□ -0.64
LINC00963-217ENST00000624009 VRK2Q86Y07 508 aa11.06□□□□□ -0.64
LINC00963-217ENST00000624009 SLC30A8Q8IWU4 369 aa11.06□□□□□ -0.64
LINC00963-217ENST00000624009 LSMEM1Q8N8F7 131 aa11.06□□□□□ -0.64
LINC00963-217ENST00000624009 ARL5BQ96KC2 179 aa11.06□□□□□ -0.64
LINC00963-217ENST00000624009 ANKRD27Q96NW4 1050 aa11.06□□□□□ -0.64
LINC00963-217ENST00000624009 ALPK1Q96QP1 1244 aa11.06□□□□□ -0.64
LINC00963-217ENST00000624009 ZNF607Q96SK3 696 aa11.06□□□□□ -0.64
LINC00963-217ENST00000624009 RLIMQ9NVW2 624 aa11.06□□□□□ -0.64
LINC00963-217ENST00000624009 CLEC4AQ9UMR7 237 aa11.06□□□□□ -0.64
LINC00963-217ENST00000624009 CHST2Q9Y4C5 530 aa11.06□□□□□ -0.64
LINC00963-217ENST00000624009 ZFHX3Q15911 3703 aa11.05□□□□□ -0.64
LINC00963-217ENST00000624009 ZNF716A6NP11 495 aa11.05□□□□□ -0.64
LINC00963-217ENST00000624009 A8MVM7 634 aa11.05□□□□□ -0.64
LINC00963-217ENST00000624009 DEFB108AA8MXU0 73 aa11.05□□□□□ -0.64
LINC00963-217ENST00000624009 AP3D1O14617 1153 aa11.05□□□□□ -0.64
LINC00963-217ENST00000624009 SLC22A2O15244 555 aa11.05□□□□□ -0.64
LINC00963-217ENST00000624009 FZD7O75084 574 aa11.05□□□□□ -0.64
LINC00963-217ENST00000624009 SERPINB7O75635 380 aa11.05□□□□□ -0.64
LINC00963-217ENST00000624009 GPIP06744 558 aa11.05□□□□□ -0.64
LINC00963-217ENST00000624009 NUDT7P0C024 238 aa11.05□□□□□ -0.64
LINC00963-217ENST00000624009 TFPIP10646 304 aa11.05□□□□□ -0.64
LINC00963-217ENST00000624009 DNASE1P24855 282 aa11.05□□□□□ -0.64
LINC00963-217ENST00000624009 CXCR1P25024 350 aa11.05□□□□□ -0.64
LINC00963-217ENST00000624009 NR1H2P55055 460 aa11.05□□□□□ -0.64
LINC00963-217ENST00000624009 ITGADQ13349 1161 aa11.05□□□□□ -0.64
LINC00963-217ENST00000624009 ADRM1Q16186 407 aa11.05□□□□□ -0.64
LINC00963-217ENST00000624009 BEX5Q5H9J7 111 aa11.05□□□□□ -0.64
LINC00963-217ENST00000624009 FBXW10Q5XX13 1052 aa11.05□□□□□ -0.64
LINC00963-217ENST00000624009 C6orf89Q6UWU4 347 aa11.05□□□□□ -0.64
LINC00963-217ENST00000624009 HMGN2P46Q86SG4 172 aa11.05□□□□□ -0.64
LINC00963-217ENST00000624009 DHDDSQ86SQ9 333 aa11.05□□□□□ -0.64
LINC00963-217ENST00000624009 CLIP4Q8N3C7 705 aa11.05□□□□□ -0.64
LINC00963-217ENST00000624009 HIPK4Q8NE63 616 aa11.05□□□□□ -0.64
LINC00963-217ENST00000624009 STK35Q8TDR2 534 aa11.05□□□□□ -0.64
LINC00963-217ENST00000624009 MAL2Q969L2 176 aa11.05□□□□□ -0.64
LINC00963-217ENST00000624009 CGREF1Q99674 301 aa11.05□□□□□ -0.64
LINC00963-217ENST00000624009 CPPED1Q9BRF8 314 aaPredicted RBP11.05□□□□□ -0.64
LINC00963-217ENST00000624009 SF3B5Q9BWJ5 86 aaKnown RBP11.05□□□□□ -0.64
LINC00963-217ENST00000624009 KLHL28Q9NXS3 571 aa11.05□□□□□ -0.64
LINC00963-217ENST00000624009 NAV3Q8IVL0 2385 aa11.05□□□□□ -0.64
LINC00963-217ENST00000624009 TMEM72A0PK05 275 aa11.04□□□□□ -0.64
LINC00963-217ENST00000624009 BBIP1A8MTZ0 92 aa11.04□□□□□ -0.64
LINC00963-217ENST00000624009 TMCC2O75069 709 aa11.04□□□□□ -0.64
LINC00963-217ENST00000624009 NPIPB7O75200 414 aa11.04□□□□□ -0.64
LINC00963-217ENST00000624009 VAMP5O95183 116 aa11.04□□□□□ -0.64
LINC00963-217ENST00000624009 RAF1P04049 648 aa11.04□□□□□ -0.64
LINC00963-217ENST00000624009 IST1P53990 364 aa11.04□□□□□ -0.64
LINC00963-217ENST00000624009 SCARB2Q14108 478 aa11.04□□□□□ -0.64
LINC00963-217ENST00000624009 MAPRE2Q15555 327 aa11.04□□□□□ -0.64
LINC00963-217ENST00000624009 EXOC3L2Q2M3D2 409 aa11.04□□□□□ -0.64
LINC00963-217ENST00000624009 RPS26P11Q5JNZ5 115 aaPredicted RBP11.04□□□□□ -0.64
LINC00963-217ENST00000624009 SFRP5Q5T4F7 317 aa11.04□□□□□ -0.64
LINC00963-217ENST00000624009 FAM91A1Q658Y4 838 aa11.04□□□□□ -0.64
LINC00963-217ENST00000624009 NUFIP2Q7Z417 695 aaKnown RBP11.04□□□□□ -0.64
LINC00963-217ENST00000624009 NET1Q7Z628 596 aaPredicted RBP11.04□□□□□ -0.64
LINC00963-217ENST00000624009 SERPINA11Q86U17 422 aa11.04□□□□□ -0.64
LINC00963-217ENST00000624009 P2RY8Q86VZ1 359 aa11.04□□□□□ -0.64
LINC00963-217ENST00000624009 C11orf65Q8NCR3 313 aa11.04□□□□□ -0.64
LINC00963-217ENST00000624009 DNAJA4Q8WW22 397 aaPredicted RBP11.04□□□□□ -0.64
LINC00963-217ENST00000624009 HSD17B8Q92506 261 aa11.04□□□□□ -0.64
LINC00963-217ENST00000624009 C3orf49Q96BT1 292 aa11.04□□□□□ -0.64
LINC00963-217ENST00000624009 SH3GL1Q99961 368 aa11.04□□□□□ -0.64
LINC00963-217ENST00000624009 NAA11Q9BSU3 229 aaPredicted RBP11.04□□□□□ -0.64
LINC00963-217ENST00000624009 TMEM120AQ9BXJ8 343 aa11.04□□□□□ -0.64
LINC00963-217ENST00000624009 KLHL4Q9C0H6 718 aa11.04□□□□□ -0.64
LINC00963-217ENST00000624009 ACTR6Q9GZN1 396 aa11.04□□□□□ -0.64
LINC00963-217ENST00000624009 IKZF5Q9H5V7 419 aa11.04□□□□□ -0.64
LINC00963-217ENST00000624009 C12orf49Q9H741 205 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms