RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 MRPS2Q9Y399 296 aaKnown RBP14.54□□□□□ -0.08
NPHP4-211ENST00000622020 CMPK1P30085 196 aa14.54□□□□□ -0.08
NPHP4-211ENST00000622020 RPE65Q16518 533 aa14.54□□□□□ -0.08
NPHP4-211ENST00000622020 PRAMEF8Q5VWM4 474 aa14.54□□□□□ -0.08
NPHP4-211ENST00000622020 PRAMEF7Q5VXH5 474 aa14.54□□□□□ -0.08
NPHP4-211ENST00000622020 VITQ6UXI7 678 aa14.54□□□□□ -0.08
NPHP4-211ENST00000622020 NHLRC1Q6VVB1 395 aa14.54□□□□□ -0.08
NPHP4-211ENST00000622020 DNAAF1Q8NEP3 725 aa14.54□□□□□ -0.08
NPHP4-211ENST00000622020 SMARCD2Q92925 531 aa14.54□□□□□ -0.08
NPHP4-211ENST00000622020 KCMF1Q9P0J7 381 aa14.54□□□□□ -0.08
NPHP4-211ENST00000622020 ST6GALNAC2Q9UJ37 374 aa14.54□□□□□ -0.08
NPHP4-211ENST00000622020 IER3IP1Q9Y5U9 82 aa14.54□□□□□ -0.08
NPHP4-211ENST00000622020 A0A1W2PPL8 197 aa14.53□□□□□ -0.08
NPHP4-211ENST00000622020 STX11O75558 287 aa14.53□□□□□ -0.08
NPHP4-211ENST00000622020 CPMP14384 443 aa14.53□□□□□ -0.08
NPHP4-211ENST00000622020 RPL4P36578 427 aaKnown RBP14.53□□□□□ -0.08
NPHP4-211ENST00000622020 BTN1A1Q13410 526 aa14.53□□□□□ -0.08
NPHP4-211ENST00000622020 KLF9Q13886 244 aaPredicted RBP14.53□□□□□ -0.08
NPHP4-211ENST00000622020 ZMYND11Q15326 602 aa14.53□□□□□ -0.08
NPHP4-211ENST00000622020 ARHGAP11BQ3KRB8 267 aa14.53□□□□□ -0.08
NPHP4-211ENST00000622020 AMZ1Q400G9 498 aa14.53□□□□□ -0.08
NPHP4-211ENST00000622020 ESX1Q8N693 406 aa14.53□□□□□ -0.08
NPHP4-211ENST00000622020 TMEM52Q8NDY8 209 aa14.53□□□□□ -0.08
NPHP4-211ENST00000622020 OR4N2Q8NGD1 307 aa14.53□□□□□ -0.08
NPHP4-211ENST00000622020 OR8K3Q8NH51 312 aa14.53□□□□□ -0.08
NPHP4-211ENST00000622020 OR56B4Q8NH76 319 aa14.53□□□□□ -0.08
NPHP4-211ENST00000622020 ZPLD1Q8TCW7 415 aa14.53□□□□□ -0.08
NPHP4-211ENST00000622020 NMNAT3Q96T66 252 aa14.53□□□□□ -0.08
NPHP4-211ENST00000622020 MS4A7Q9GZW8 240 aaPredicted RBP14.53□□□□□ -0.08
NPHP4-211ENST00000622020 TSPAN10Q9H1Z9 355 aaPredicted RBP14.53□□□□□ -0.08
NPHP4-211ENST00000622020 HRASLSQ9HDD0 168 aa14.53□□□□□ -0.08
NPHP4-211ENST00000622020 TBC1D3KA0A087X1G2 549 aa14.53□□□□□ -0.08
NPHP4-211ENST00000622020 TBC1D3FA6NER0 549 aaPredicted RBP14.53□□□□□ -0.08
NPHP4-211ENST00000622020 G3V3Q6 166 aa14.53□□□□□ -0.08
NPHP4-211ENST00000622020 LGALS8O00214 317 aa14.53□□□□□ -0.08
NPHP4-211ENST00000622020 FMO6PO60774 539 aa14.53□□□□□ -0.08
NPHP4-211ENST00000622020 RNGTTO60942 597 aaKnown RBP14.53□□□□□ -0.08
NPHP4-211ENST00000622020 PEX14O75381 377 aa14.53□□□□□ -0.08
NPHP4-211ENST00000622020 LINC00271P0C7V0 271 aa14.53□□□□□ -0.08
NPHP4-211ENST00000622020 DCTDP32321 178 aa14.53□□□□□ -0.08
NPHP4-211ENST00000622020 SEC13P55735 322 aa14.53□□□□□ -0.08
NPHP4-211ENST00000622020 KIAA1024LP59773 190 aa14.53□□□□□ -0.08
NPHP4-211ENST00000622020 PITPNAQ00169 270 aa14.53□□□□□ -0.08
NPHP4-211ENST00000622020 HSD17B12Q53GQ0 312 aa14.53□□□□□ -0.08
NPHP4-211ENST00000622020 TBC1D3GQ6DHY5 549 aa14.53□□□□□ -0.08
NPHP4-211ENST00000622020 ALKAL2Q6UX46 152 aa14.53□□□□□ -0.08
NPHP4-211ENST00000622020 OR14C36Q8NHC7 312 aa14.53□□□□□ -0.08
NPHP4-211ENST00000622020 COQ8AQ8NI60 647 aa14.53□□□□□ -0.08
NPHP4-211ENST00000622020 NR4A3Q92570 626 aa14.53□□□□□ -0.08
NPHP4-211ENST00000622020 PITHD1Q9GZP4 211 aaPredicted RBP14.53□□□□□ -0.08
NPHP4-211ENST00000622020 SCP2D1Q9UJQ7 156 aa14.53□□□□□ -0.08
NPHP4-211ENST00000622020 COPS3Q9UNS2 423 aa14.53□□□□□ -0.08
NPHP4-211ENST00000622020 SLC27A6Q9Y2P4 619 aa14.53□□□□□ -0.08
NPHP4-211ENST00000622020 GRXCR1A8MXD5 290 aa14.52□□□□□ -0.08
NPHP4-211ENST00000622020 CHURC1-FNTBB4DL54 471 aa14.52□□□□□ -0.08
NPHP4-211ENST00000622020 SMAD9O15198 467 aaKnown RBP14.52□□□□□ -0.08
NPHP4-211ENST00000622020 SC5DO75845 299 aa14.52□□□□□ -0.08
NPHP4-211ENST00000622020 CEACAM5P06731 702 aa14.52□□□□□ -0.08
NPHP4-211ENST00000622020 UCHL1P09936 223 aa14.52□□□□□ -0.08
NPHP4-211ENST00000622020 GAAP10253 952 aa14.52□□□□□ -0.08
NPHP4-211ENST00000622020 PVRP15151 417 aa14.52□□□□□ -0.08
NPHP4-211ENST00000622020 CCR9P51686 369 aa14.52□□□□□ -0.08
NPHP4-211ENST00000622020 MAP2K6P52564 334 aa14.52□□□□□ -0.08
NPHP4-211ENST00000622020 SIRPAP78324 504 aa14.52□□□□□ -0.08
NPHP4-211ENST00000622020 DUSP8Q13202 625 aa14.52□□□□□ -0.08
NPHP4-211ENST00000622020 SGCGQ13326 291 aa14.52□□□□□ -0.08
NPHP4-211ENST00000622020 FAM78AQ5JUQ0 283 aa14.52□□□□□ -0.08
NPHP4-211ENST00000622020 AGBL4Q5VU57 503 aa14.52□□□□□ -0.08
NPHP4-211ENST00000622020 ZNF619Q8N2I2 560 aa14.52□□□□□ -0.08
NPHP4-211ENST00000622020 SRFBP1Q8NEF9 429 aaKnown RBP14.52□□□□□ -0.08
NPHP4-211ENST00000622020 SFXN2Q96NB2 322 aa14.52□□□□□ -0.08
NPHP4-211ENST00000622020 TRAF4Q9BUZ4 470 aaPredicted RBP14.52□□□□□ -0.08
NPHP4-211ENST00000622020 PHPT1Q9NRX4 125 aaPredicted RBP14.52□□□□□ -0.08
NPHP4-211ENST00000622020 RABL2AQ9UBK7 228 aaPredicted RBP14.52□□□□□ -0.08
NPHP4-211ENST00000622020 MAB21L2Q9Y586 359 aa14.52□□□□□ -0.08
NPHP4-211ENST00000622020 MEIS3P1A6NDR6 274 aa14.52□□□□□ -0.08
NPHP4-211ENST00000622020 OR2W5A6NFC9 320 aa14.52□□□□□ -0.08
NPHP4-211ENST00000622020 CT62P0C5K7 136 aa14.52□□□□□ -0.08
NPHP4-211ENST00000622020 GALP22466 123 aa14.52□□□□□ -0.08
NPHP4-211ENST00000622020 RPS27P42677 84 aaKnown RBP14.52□□□□□ -0.08
NPHP4-211ENST00000622020 PLAURQ03405 335 aa14.52□□□□□ -0.08
NPHP4-211ENST00000622020 MFSD13AQ14CX5 517 aa14.52□□□□□ -0.08
NPHP4-211ENST00000622020 MEIOBQ8N635 442 aa14.52□□□□□ -0.08
NPHP4-211ENST00000622020 TSSK2Q96PF2 358 aa14.52□□□□□ -0.08
NPHP4-211ENST00000622020 MRPL39Q9NYK5 338 aaKnown RBP14.52□□□□□ -0.08
NPHP4-211ENST00000622020 FLRT3Q9NZU0 649 aa14.52□□□□□ -0.08
NPHP4-211ENST00000622020 TBC1D29Q9UFV1 150 aa14.52□□□□□ -0.08
NPHP4-211ENST00000622020 A0A1B0GTH9 108 aa14.52□□□□□ -0.09
NPHP4-211ENST00000622020 FGF17O60258 216 aa14.52□□□□□ -0.09
NPHP4-211ENST00000622020 CTSVO60911 334 aa14.52□□□□□ -0.09
NPHP4-211ENST00000622020 TMIGD3P0DMS9 266 aaPredicted RBP14.52□□□□□ -0.09
NPHP4-211ENST00000622020 NID1P14543 1247 aa14.52□□□□□ -0.09
NPHP4-211ENST00000622020 GBX2P52951 348 aaPredicted RBP14.52□□□□□ -0.09
NPHP4-211ENST00000622020 SHC2P98077 582 aa14.52□□□□□ -0.09
NPHP4-211ENST00000622020 GAB4Q2WGN9 574 aa14.52□□□□□ -0.09
NPHP4-211ENST00000622020 GARNL3Q5VVW2 1013 aa14.52□□□□□ -0.09
NPHP4-211ENST00000622020 OR5M10Q6IEU7 315 aa14.52□□□□□ -0.09
NPHP4-211ENST00000622020 MFSD9Q8NBP5 474 aa14.52□□□□□ -0.09
NPHP4-211ENST00000622020 MOSPD2Q8NHP6 518 aa14.52□□□□□ -0.09
NPHP4-211ENST00000622020 C1orf216Q8TAB5 229 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms