RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 A0A1W2PQM1 296 aa16.05■□□□□ 0.16
FAM3A-222ENST00000621967 ZC3H12DA2A288 527 aaKnown RBP16.05■□□□□ 0.16
FAM3A-222ENST00000621967 TLCD2A6NGC4 264 aa16.05■□□□□ 0.16
FAM3A-222ENST00000621967 NPIPA7E9PJI5 369 aa16.05■□□□□ 0.16
FAM3A-222ENST00000621967 BRINP1O60477 761 aa16.05■□□□□ 0.16
FAM3A-222ENST00000621967 NPIPA8P0DM63 369 aa16.05■□□□□ 0.16
FAM3A-222ENST00000621967 MADCAM1Q13477 382 aa16.05■□□□□ 0.16
FAM3A-222ENST00000621967 IL18Q14116 193 aa16.05■□□□□ 0.16
FAM3A-222ENST00000621967 TRIP6Q15654 476 aaKnown RBP16.05■□□□□ 0.16
FAM3A-222ENST00000621967 ZNF613Q6PF04 617 aa16.05■□□□□ 0.16
FAM3A-222ENST00000621967 RNF44Q7L0R7 432 aa16.05■□□□□ 0.16
FAM3A-222ENST00000621967 LSRQ86X29 649 aaPredicted RBP16.05■□□□□ 0.16
FAM3A-222ENST00000621967 SHISA5Q8N114 240 aa16.05■□□□□ 0.16
FAM3A-222ENST00000621967 SLC37A3Q8NCC5 494 aa16.05■□□□□ 0.16
FAM3A-222ENST00000621967 PTP4A1Q93096 173 aa16.05■□□□□ 0.16
FAM3A-222ENST00000621967 OTULINQ96BN8 352 aa16.05■□□□□ 0.16
FAM3A-222ENST00000621967 CTHRC1Q96CG8 243 aa16.05■□□□□ 0.16
FAM3A-222ENST00000621967 BPIFA2Q96DR5 249 aa16.05■□□□□ 0.16
FAM3A-222ENST00000621967 GFM1Q96RP9 751 aaKnown RBP16.05■□□□□ 0.16
FAM3A-222ENST00000621967 C14orf105Q9NVL8 296 aa16.05■□□□□ 0.16
FAM3A-222ENST00000621967 MALT1Q9UDY8 824 aa16.05■□□□□ 0.16
FAM3A-222ENST00000621967 NUFIP1Q9UHK0 495 aaKnown RBP16.05■□□□□ 0.16
FAM3A-222ENST00000621967 SPACA6W5XKT8 324 aa16.05■□□□□ 0.16
FAM3A-222ENST00000621967 PTPRZ1P23471 2315 aaPredicted RBP16.04■□□□□ 0.16
FAM3A-222ENST00000621967 SLC22A31A6NKX4 558 aa16.04■□□□□ 0.16
FAM3A-222ENST00000621967 NT5EP21589 574 aa16.04■□□□□ 0.16
FAM3A-222ENST00000621967 FOXK2Q01167 660 aa16.04■□□□□ 0.16
FAM3A-222ENST00000621967 CDK10Q15131 360 aa16.04■□□□□ 0.16
FAM3A-222ENST00000621967 SNAP47Q5SQN1 464 aa16.04■□□□□ 0.16
FAM3A-222ENST00000621967 HBMQ6B0K9 141 aa16.04■□□□□ 0.16
FAM3A-222ENST00000621967 MZT2BQ6NZ67 158 aa16.04■□□□□ 0.16
FAM3A-222ENST00000621967 PLET1Q6UQ28 207 aa16.04■□□□□ 0.16
FAM3A-222ENST00000621967 OR13C2Q8NGS9 318 aa16.04■□□□□ 0.16
FAM3A-222ENST00000621967 DOK4Q8TEW6 326 aa16.04■□□□□ 0.16
FAM3A-222ENST00000621967 RERGQ96A58 199 aaPredicted RBP16.04■□□□□ 0.16
FAM3A-222ENST00000621967 MAP3K3Q99759 626 aa16.04■□□□□ 0.16
FAM3A-222ENST00000621967 DPYSL5Q9BPU6 564 aa16.04■□□□□ 0.16
FAM3A-222ENST00000621967 TRIM36Q9NQ86 728 aa16.04■□□□□ 0.16
FAM3A-222ENST00000621967 MED31Q9Y3C7 131 aa16.04■□□□□ 0.16
FAM3A-222ENST00000621967 PRR23D1E9PI22 279 aaPredicted RBP16.04■□□□□ 0.16
FAM3A-222ENST00000621967 LYRM1O43325 122 aa16.04■□□□□ 0.16
FAM3A-222ENST00000621967 PTP4A3O75365 173 aa16.04■□□□□ 0.16
FAM3A-222ENST00000621967 RFPL3O75679 317 aa16.04■□□□□ 0.16
FAM3A-222ENST00000621967 CT62P0C5K7 136 aa16.04■□□□□ 0.16
FAM3A-222ENST00000621967 PRR23D2P0DMB1 279 aaPredicted RBP16.04■□□□□ 0.16
FAM3A-222ENST00000621967 PRKAR1AP10644 381 aa16.04■□□□□ 0.16
FAM3A-222ENST00000621967 PVRP15151 417 aa16.04■□□□□ 0.16
FAM3A-222ENST00000621967 DRD5P21918 477 aa16.04■□□□□ 0.16
FAM3A-222ENST00000621967 SLC2A5P22732 501 aa16.04■□□□□ 0.16
FAM3A-222ENST00000621967 LSSP48449 732 aa16.04■□□□□ 0.16
FAM3A-222ENST00000621967 POU6F2P78424 691 aaPredicted RBP16.04■□□□□ 0.16
FAM3A-222ENST00000621967 CFHR1Q03591 330 aa16.04■□□□□ 0.16
FAM3A-222ENST00000621967 SQSTM1Q13501 440 aa16.04■□□□□ 0.16
FAM3A-222ENST00000621967 CLPPQ16740 277 aaPredicted RBP16.04■□□□□ 0.16
FAM3A-222ENST00000621967 MANEAQ5SRI9 462 aa16.04■□□□□ 0.16
FAM3A-222ENST00000621967 TMEM71Q6P5X7 295 aa16.04■□□□□ 0.16
FAM3A-222ENST00000621967 CDK20Q8IZL9 346 aa16.04■□□□□ 0.16
FAM3A-222ENST00000621967 ZNF655Q8N720 491 aaPredicted RBP16.04■□□□□ 0.16
FAM3A-222ENST00000621967 NACC2Q96BF6 587 aa16.04■□□□□ 0.16
FAM3A-222ENST00000621967 DMRTB1Q96MA1 342 aa16.04■□□□□ 0.16
FAM3A-222ENST00000621967 ZNF559Q9BR84 538 aa16.04■□□□□ 0.16
FAM3A-222ENST00000621967 SEMA6CQ9H3T2 930 aa16.04■□□□□ 0.16
FAM3A-222ENST00000621967 MEPEQ9NQ76 525 aaPredicted RBP16.04■□□□□ 0.16
FAM3A-222ENST00000621967 SLC35A3Q9Y2D2 325 aa16.04■□□□□ 0.16
FAM3A-222ENST00000621967 DAPL1A0PJW8 107 aa16.03■□□□□ 0.16
FAM3A-222ENST00000621967 PLPP2O43688 288 aa16.03■□□□□ 0.16
FAM3A-222ENST00000621967 GALR3O60755 368 aaPredicted RBP16.03■□□□□ 0.16
FAM3A-222ENST00000621967 TRIM3O75382 744 aaPredicted RBP16.03■□□□□ 0.16
FAM3A-222ENST00000621967 NKX2-2O95096 273 aa16.03■□□□□ 0.16
FAM3A-222ENST00000621967 F8A1P23610 371 aa16.03■□□□□ 0.16
FAM3A-222ENST00000621967 SHC2P98077 582 aa16.03■□□□□ 0.16
FAM3A-222ENST00000621967 EXOSC7Q15024 291 aaKnown RBP16.03■□□□□ 0.16
FAM3A-222ENST00000621967 TRAM1Q15629 374 aa16.03■□□□□ 0.16
FAM3A-222ENST00000621967 FIGNL1Q6PIW4 674 aa16.03■□□□□ 0.16
FAM3A-222ENST00000621967 CA13Q8N1Q1 262 aa16.03■□□□□ 0.16
FAM3A-222ENST00000621967 UBE2J2Q8N2K1 259 aa16.03■□□□□ 0.16
FAM3A-222ENST00000621967 NLGN4YQ8NFZ3 816 aaPredicted RBP16.03■□□□□ 0.16
FAM3A-222ENST00000621967 OR5T3Q8NGG3 340 aa16.03■□□□□ 0.16
FAM3A-222ENST00000621967 OR5W2Q8NH69 310 aa16.03■□□□□ 0.16
FAM3A-222ENST00000621967 KCTD12Q96CX2 325 aaKnown RBP16.03■□□□□ 0.16
FAM3A-222ENST00000621967 TEAD3Q99594 435 aa16.03■□□□□ 0.16
FAM3A-222ENST00000621967 ZNF426Q9BUY5 554 aa16.03■□□□□ 0.16
FAM3A-222ENST00000621967 IFT27Q9BW83 186 aa16.03■□□□□ 0.16
FAM3A-222ENST00000621967 RANGRFQ9HD47 186 aaPredicted RBP16.03■□□□□ 0.16
FAM3A-222ENST00000621967 A0A0B4J2E0 115 aa16.02■□□□□ 0.16
FAM3A-222ENST00000621967 A0A1B0GX12 115 aa16.02■□□□□ 0.16
FAM3A-222ENST00000621967 GXYLT2A0PJZ3 443 aa16.02■□□□□ 0.16
FAM3A-222ENST00000621967 D6RAR5 112 aa16.02■□□□□ 0.16
FAM3A-222ENST00000621967 ST6GAL1P15907 406 aa16.02■□□□□ 0.16
FAM3A-222ENST00000621967 ELK1P19419 428 aa16.02■□□□□ 0.16
FAM3A-222ENST00000621967 ALAS2P22557 587 aa16.02■□□□□ 0.16
FAM3A-222ENST00000621967 CLDN20P56880 219 aa16.02■□□□□ 0.16
FAM3A-222ENST00000621967 MRPS15P82914 257 aaKnown RBP16.02■□□□□ 0.16
FAM3A-222ENST00000621967 GPALPP1Q8IXQ4 340 aa16.02■□□□□ 0.16
FAM3A-222ENST00000621967 OR4D9Q8NGE8 314 aa16.02■□□□□ 0.16
FAM3A-222ENST00000621967 TBX5Q99593 518 aa16.02■□□□□ 0.16
FAM3A-222ENST00000621967 SOHLH2Q9NX45 425 aa16.02■□□□□ 0.16
FAM3A-222ENST00000621967 HAO2Q9NYQ3 351 aa16.02■□□□□ 0.16
FAM3A-222ENST00000621967 CDV3Q9UKY7 258 aaKnown RBP16.02■□□□□ 0.16
FAM3A-222ENST00000621967 ZMIZ1Q9ULJ6 1067 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms