RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 GPN3Q9UHW5 284 aaPredicted RBP9.1□□□□□ -0.95
VTA1-205ENST00000620996 SPIN1Q9Y657 262 aaPredicted RBP9.1□□□□□ -0.95
VTA1-205ENST00000620996 NPIPB9F8W1W9 429 aa9.1□□□□□ -0.95
VTA1-205ENST00000620996 KLF4O43474 513 aa9.1□□□□□ -0.95
VTA1-205ENST00000620996 CDC40O60508 579 aaKnown RBP eCLIP9.1□□□□□ -0.95
VTA1-205ENST00000620996 ALOX12BO75342 701 aa9.1□□□□□ -0.95
VTA1-205ENST00000620996 PIPP12273 146 aaPredicted RBP9.1□□□□□ -0.95
VTA1-205ENST00000620996 SLC15A1P46059 708 aa9.1□□□□□ -0.95
VTA1-205ENST00000620996 ZNF791Q3KP31 576 aaPredicted RBP9.1□□□□□ -0.95
VTA1-205ENST00000620996 KLHL26Q53HC5 615 aa9.1□□□□□ -0.95
VTA1-205ENST00000620996 PAPD4Q6PIY7 484 aaKnown RBP9.1□□□□□ -0.95
VTA1-205ENST00000620996 FAM181AQ8N9Y4 354 aa9.1□□□□□ -0.95
VTA1-205ENST00000620996 MR1Q95460 341 aa9.1□□□□□ -0.95
VTA1-205ENST00000620996 ADIPOR1Q96A54 375 aa9.1□□□□□ -0.95
VTA1-205ENST00000620996 TTTY10Q9BZA0 68 aa9.1□□□□□ -0.95
VTA1-205ENST00000620996 KLHL1Q9NR64 748 aa9.1□□□□□ -0.95
VTA1-205ENST00000620996 BDP1A6H8Y1 2624 aa9.1□□□□□ -0.95
VTA1-205ENST00000620996 TRBV11-1A0A0K0K1C0 115 aa9.09□□□□□ -0.95
VTA1-205ENST00000620996 TEX51A0A1B0GUA7 166 aa9.09□□□□□ -0.95
VTA1-205ENST00000620996 PRR23D1E9PI22 279 aaPredicted RBP9.09□□□□□ -0.95
VTA1-205ENST00000620996 PRR23D2P0DMB1 279 aaPredicted RBP9.09□□□□□ -0.95
VTA1-205ENST00000620996 CCL4P13236 92 aa9.09□□□□□ -0.95
VTA1-205ENST00000620996 ABCD3P28288 659 aa9.09□□□□□ -0.95
VTA1-205ENST00000620996 MPLP40238 635 aa9.09□□□□□ -0.95
VTA1-205ENST00000620996 NRG3P56975 720 aa9.09□□□□□ -0.95
VTA1-205ENST00000620996 IRF3Q14653 427 aa9.09□□□□□ -0.95
VTA1-205ENST00000620996 LCN10Q6JVE6 187 aa9.09□□□□□ -0.95
VTA1-205ENST00000620996 ANKRD37Q7Z713 158 aa9.09□□□□□ -0.95
VTA1-205ENST00000620996 CMIPQ8IY22 773 aa9.09□□□□□ -0.95
VTA1-205ENST00000620996 OR51L1Q8NGJ5 315 aa9.09□□□□□ -0.95
VTA1-205ENST00000620996 OR4K13Q8NH42 304 aa9.09□□□□□ -0.95
VTA1-205ENST00000620996 DNAJA4Q8WW22 397 aaPredicted RBP9.09□□□□□ -0.95
VTA1-205ENST00000620996 ZNF486Q96H40 463 aaPredicted RBP9.09□□□□□ -0.95
VTA1-205ENST00000620996 TAPBPLQ9BX59 468 aa9.09□□□□□ -0.95
VTA1-205ENST00000620996 D6RAR5 112 aa9.09□□□□□ -0.95
VTA1-205ENST00000620996 SLC6A6P31641 620 aa9.09□□□□□ -0.95
VTA1-205ENST00000620996 FXYD6P3P58550 94 aa9.09□□□□□ -0.95
VTA1-205ENST00000620996 DCAF7P61962 342 aa9.09□□□□□ -0.95
VTA1-205ENST00000620996 FOXK2Q01167 660 aa9.09□□□□□ -0.95
VTA1-205ENST00000620996 DOC2BQ14184 412 aa9.09□□□□□ -0.95
VTA1-205ENST00000620996 WBP2NLQ6ICG8 309 aa9.09□□□□□ -0.95
VTA1-205ENST00000620996 SLITRK4Q8IW52 837 aa9.09□□□□□ -0.95
VTA1-205ENST00000620996 SDR9C7Q8NEX9 313 aa9.09□□□□□ -0.95
VTA1-205ENST00000620996 OR10H4Q8NGA5 316 aa9.09□□□□□ -0.95
VTA1-205ENST00000620996 BRIX1Q8TDN6 353 aaKnown RBP9.09□□□□□ -0.95
VTA1-205ENST00000620996 C3orf49Q96BT1 292 aa9.09□□□□□ -0.95
VTA1-205ENST00000620996 SECISBP2Q96T21 854 aaKnown RBP9.09□□□□□ -0.95
VTA1-205ENST00000620996 KLHDC3Q9BQ90 382 aa9.09□□□□□ -0.95
VTA1-205ENST00000620996 SIGLEC7Q9Y286 467 aa9.09□□□□□ -0.95
VTA1-205ENST00000620996 GPR179Q6PRD1 2367 aa9.09□□□□□ -0.95
VTA1-205ENST00000620996 A8MV72 311 aaPredicted RBP9.09□□□□□ -0.95
VTA1-205ENST00000620996 IDH3BO43837 385 aa9.09□□□□□ -0.95
VTA1-205ENST00000620996 LDOC1O95751 146 aaPredicted RBP9.09□□□□□ -0.95
VTA1-205ENST00000620996 ANKRD34CP0C6C1 535 aa9.09□□□□□ -0.95
VTA1-205ENST00000620996 CLUP10909 449 aa9.09□□□□□ -0.95
VTA1-205ENST00000620996 ZNF3P17036 446 aa9.09□□□□□ -0.95
VTA1-205ENST00000620996 RAB40BQ12829 278 aa9.09□□□□□ -0.95
VTA1-205ENST00000620996 TMPRSS11FQ6ZWK6 438 aa9.09□□□□□ -0.95
VTA1-205ENST00000620996 ZNF440Q8IYI8 595 aa9.09□□□□□ -0.95
VTA1-205ENST00000620996 ZSCAN1Q8NBB4 408 aa9.09□□□□□ -0.95
VTA1-205ENST00000620996 AGBL5Q8NDL9 886 aa9.09□□□□□ -0.95
VTA1-205ENST00000620996 OR52E2Q8NGJ4 325 aa9.09□□□□□ -0.95
VTA1-205ENST00000620996 SMAP2Q8WU79 429 aaPredicted RBP9.09□□□□□ -0.95
VTA1-205ENST00000620996 OPALINQ96PE5 141 aa9.09□□□□□ -0.95
VTA1-205ENST00000620996 LPAR4Q99677 370 aa9.09□□□□□ -0.95
VTA1-205ENST00000620996 ULBP3Q9BZM4 244 aa9.09□□□□□ -0.95
VTA1-205ENST00000620996 RTN4RQ9BZR6 473 aa9.09□□□□□ -0.95
VTA1-205ENST00000620996 TNFRSF10DQ9UBN6 386 aa9.09□□□□□ -0.95
VTA1-205ENST00000620996 DIMT1Q9UNQ2 313 aaKnown RBP9.09□□□□□ -0.95
VTA1-205ENST00000620996 IER3IP1Q9Y5U9 82 aa9.09□□□□□ -0.95
VTA1-205ENST00000620996 R4GN57 208 aa9.09□□□□□ -0.95
VTA1-205ENST00000620996 ZNF28P17035 718 aa9.08□□□□□ -0.96
VTA1-205ENST00000620996 TACR3P29371 465 aa9.08□□□□□ -0.96
VTA1-205ENST00000620996 CD79BP40259 229 aa9.08□□□□□ -0.96
VTA1-205ENST00000620996 GRK6P43250 576 aa9.08□□□□□ -0.96
VTA1-205ENST00000620996 P2RX3P56373 397 aa9.08□□□□□ -0.96
VTA1-205ENST00000620996 RNF4P78317 190 aa9.08□□□□□ -0.96
VTA1-205ENST00000620996 ZNF117Q03924 483 aa9.08□□□□□ -0.96
VTA1-205ENST00000620996 CRMP1Q14194 572 aa9.08□□□□□ -0.96
VTA1-205ENST00000620996 ANGPT1Q15389 498 aa9.08□□□□□ -0.96
VTA1-205ENST00000620996 ZSWIM7Q19AV6 140 aa9.08□□□□□ -0.96
VTA1-205ENST00000620996 RSBN1Q5VWQ0 802 aaPredicted RBP9.08□□□□□ -0.96
VTA1-205ENST00000620996 RTL4Q6ZR62 310 aa9.08□□□□□ -0.96
VTA1-205ENST00000620996 MCFD2Q8NI22 146 aa9.08□□□□□ -0.96
VTA1-205ENST00000620996 ZC3H10Q96K80 434 aaKnown RBP9.08□□□□□ -0.96
VTA1-205ENST00000620996 HCAR1Q9BXC0 346 aa9.08□□□□□ -0.96
VTA1-205ENST00000620996 RACGAP1Q9H0H5 632 aa9.08□□□□□ -0.96
VTA1-205ENST00000620996 FN3KQ9H479 309 aa9.08□□□□□ -0.96
VTA1-205ENST00000620996 CRNNQ9UBG3 495 aaPredicted RBP9.08□□□□□ -0.96
VTA1-205ENST00000620996 ADAM18Q9Y3Q7 739 aa9.08□□□□□ -0.96
VTA1-205ENST00000620996 CFAP54Q96N23 3096 aa9.08□□□□□ -0.96
VTA1-205ENST00000620996 IRGMA1A4Y4 181 aa9.08□□□□□ -0.96
VTA1-205ENST00000620996 KDM4EB2RXH2 506 aaPredicted RBP9.08□□□□□ -0.96
VTA1-205ENST00000620996 LRRTM2O43300 516 aa9.08□□□□□ -0.96
VTA1-205ENST00000620996 IFNGP01579 166 aa9.08□□□□□ -0.96
VTA1-205ENST00000620996 KLK3P07288 261 aaPredicted RBP9.08□□□□□ -0.96
VTA1-205ENST00000620996 HBQ1P09105 142 aa9.08□□□□□ -0.96
VTA1-205ENST00000620996 SP9P0CG40 484 aa9.08□□□□□ -0.96
VTA1-205ENST00000620996 TBXA2RP21731 343 aa9.08□□□□□ -0.96
VTA1-205ENST00000620996 CXCR1P25024 350 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms