RNA–Protein interactions for RNA: ENST00000619079.1

UPF3A-212, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 2,423 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-212ENST00000619079 SLC2A10O95528 541 aa10.01□□□□□ -0.81
UPF3A-212ENST00000619079 LATS1O95835 1130 aa10.01□□□□□ -0.81
UPF3A-212ENST00000619079 PAK4O96013 591 aaPredicted RBP10.01□□□□□ -0.81
UPF3A-212ENST00000619079 IGF2P01344 180 aa10.01□□□□□ -0.81
UPF3A-212ENST00000619079 UCHL1P09936 223 aa10.01□□□□□ -0.81
UPF3A-212ENST00000619079 RAB40ALP0C0E4 278 aa10.01□□□□□ -0.81
UPF3A-212ENST00000619079 GJA1P17302 382 aa10.01□□□□□ -0.81
UPF3A-212ENST00000619079 NT5EP21589 574 aa10.01□□□□□ -0.81
UPF3A-212ENST00000619079 GABRR2P28476 465 aa10.01□□□□□ -0.81
UPF3A-212ENST00000619079 AHRP35869 848 aa10.01□□□□□ -0.81
UPF3A-212ENST00000619079 ACVR1BP36896 505 aa10.01□□□□□ -0.81
UPF3A-212ENST00000619079 C6orf132Q5T0Z8 1188 aa10.01□□□□□ -0.81
UPF3A-212ENST00000619079 HEPHL1Q6MZM0 1159 aa10.01□□□□□ -0.81
UPF3A-212ENST00000619079 TSSK4Q6SA08 328 aa10.01□□□□□ -0.81
UPF3A-212ENST00000619079 NXPE4Q6UWF7 544 aa10.01□□□□□ -0.81
UPF3A-212ENST00000619079 MBOAT2Q6ZWT7 520 aa10.01□□□□□ -0.81
UPF3A-212ENST00000619079 PUSL1Q8N0Z8 303 aaKnown RBP10.01□□□□□ -0.81
UPF3A-212ENST00000619079 TMEM185AQ8NFB2 350 aa10.01□□□□□ -0.81
UPF3A-212ENST00000619079 OR2AP1Q8NGE2 309 aa10.01□□□□□ -0.81
UPF3A-212ENST00000619079 OR52L1Q8NGH7 329 aa10.01□□□□□ -0.81
UPF3A-212ENST00000619079 ZNF480Q8WV37 535 aa10.01□□□□□ -0.81
UPF3A-212ENST00000619079 RAB40AQ8WXH6 277 aa10.01□□□□□ -0.81
UPF3A-212ENST00000619079 INTS12Q96CB8 462 aaKnown RBP10.01□□□□□ -0.81
UPF3A-212ENST00000619079 S100A16Q96FQ6 103 aaKnown RBP10.01□□□□□ -0.81
UPF3A-212ENST00000619079 ENKD1Q9H0I2 346 aa10.01□□□□□ -0.81
UPF3A-212ENST00000619079 SLC38A1Q9H2H9 487 aa10.01□□□□□ -0.81
UPF3A-212ENST00000619079 UBQLN3Q9H347 655 aa10.01□□□□□ -0.81
UPF3A-212ENST00000619079 NRIP3Q9NQ35 241 aa10.01□□□□□ -0.81
UPF3A-212ENST00000619079 PRDM6Q9NQX0 595 aa10.01□□□□□ -0.81
UPF3A-212ENST00000619079 SEMA4GQ9NTN9 838 aa10.01□□□□□ -0.81
UPF3A-212ENST00000619079 MRPS23Q9Y3D9 190 aaKnown RBP10.01□□□□□ -0.81
UPF3A-212ENST00000619079 PLEKHM1Q9Y4G2 1056 aa10.01□□□□□ -0.81
UPF3A-212ENST00000619079 KANTRA0A1W2PQU2 76 aa10□□□□□ -0.81
UPF3A-212ENST00000619079 A0A1W2PRU2 124 aa10□□□□□ -0.81
UPF3A-212ENST00000619079 ZNF840PA6NDX5 716 aa10□□□□□ -0.81
UPF3A-212ENST00000619079 FAM183AA6NL82 134 aa10□□□□□ -0.81
UPF3A-212ENST00000619079 J3QLW9 94 aa10□□□□□ -0.81
UPF3A-212ENST00000619079 GOSR2O14653 212 aa10□□□□□ -0.81
UPF3A-212ENST00000619079 IRF1P10914 325 aa10□□□□□ -0.81
UPF3A-212ENST00000619079 PRG2P13727 222 aa10□□□□□ -0.81
UPF3A-212ENST00000619079 ZNF19P17023 458 aa10□□□□□ -0.81
UPF3A-212ENST00000619079 CTSCP53634 463 aa10□□□□□ -0.81
UPF3A-212ENST00000619079 DCDP81605 110 aaKnown RBP10□□□□□ -0.81
UPF3A-212ENST00000619079 TNFRSF17Q02223 184 aa10□□□□□ -0.81
UPF3A-212ENST00000619079 TFF2Q03403 129 aa10□□□□□ -0.81
UPF3A-212ENST00000619079 PIP5KL1Q5T9C9 394 aa10□□□□□ -0.81
UPF3A-212ENST00000619079 TMEM88Q6PEY1 159 aa10□□□□□ -0.81
UPF3A-212ENST00000619079 C11orf88Q6PI97 169 aa10□□□□□ -0.81
UPF3A-212ENST00000619079 SZRD1Q7Z422 152 aa10□□□□□ -0.81
UPF3A-212ENST00000619079 LDLRAD3Q86YD5 345 aa10□□□□□ -0.81
UPF3A-212ENST00000619079 SLC2A12Q8TD20 617 aa10□□□□□ -0.81
UPF3A-212ENST00000619079 CXorf40AQ8TE69 158 aa10□□□□□ -0.81
UPF3A-212ENST00000619079 TNFAIP8L1Q8WVP5 186 aa10□□□□□ -0.81
UPF3A-212ENST00000619079 VOPP1Q96AW1 172 aa10□□□□□ -0.81
UPF3A-212ENST00000619079 OR1F2PQ96R84 312 aa10□□□□□ -0.81
UPF3A-212ENST00000619079 ARHGDIGQ99819 225 aa10□□□□□ -0.81
UPF3A-212ENST00000619079 TCEAL7Q9BRU2 100 aa10□□□□□ -0.81
UPF3A-212ENST00000619079 SGPP1Q9BX95 441 aa10□□□□□ -0.81
UPF3A-212ENST00000619079 C1QTNF2Q9BXJ5 285 aa10□□□□□ -0.81
UPF3A-212ENST00000619079 RSPH9Q9H1X1 276 aaPredicted RBP10□□□□□ -0.81
UPF3A-212ENST00000619079 KCNK12Q9HB15 430 aa10□□□□□ -0.81
UPF3A-212ENST00000619079 KLHL28Q9NXS3 571 aa10□□□□□ -0.81
UPF3A-212ENST00000619079 TINAGQ9UJW2 476 aa10□□□□□ -0.81
UPF3A-212ENST00000619079 ZMIZ1Q9ULJ6 1067 aa10□□□□□ -0.81
UPF3A-212ENST00000619079 BRWD1Q9NSI6 2320 aa10□□□□□ -0.81
UPF3A-212ENST00000619079 OR14I1A6ND48 311 aa9.99□□□□□ -0.81
UPF3A-212ENST00000619079 FAM86C2PA6NEL3 165 aa9.99□□□□□ -0.81
UPF3A-212ENST00000619079 CPSF4LA6NMK7 179 aaKnown RBP9.99□□□□□ -0.81
UPF3A-212ENST00000619079 GPR31O00270 319 aa9.99□□□□□ -0.81
UPF3A-212ENST00000619079 LCMT2O60294 686 aaKnown RBP9.99□□□□□ -0.81
UPF3A-212ENST00000619079 EIF4E2O60573 245 aaKnown RBP9.99□□□□□ -0.81
UPF3A-212ENST00000619079 MTX2O75431 263 aa9.99□□□□□ -0.81
UPF3A-212ENST00000619079 GLAP06280 429 aa9.99□□□□□ -0.81
UPF3A-212ENST00000619079 ZNF806P0C7X5 589 aa9.99□□□□□ -0.81
UPF3A-212ENST00000619079 HTR2AP28223 471 aa9.99□□□□□ -0.81
UPF3A-212ENST00000619079 GPR4P46093 362 aa9.99□□□□□ -0.81
UPF3A-212ENST00000619079 SNRPD1P62314 119 aaKnown RBP9.99□□□□□ -0.81
UPF3A-212ENST00000619079 TSTA3Q13630 321 aaPredicted RBP9.99□□□□□ -0.81
UPF3A-212ENST00000619079 ZNF345Q14585 488 aa9.99□□□□□ -0.81
UPF3A-212ENST00000619079 NDUFAF6Q330K2 333 aa9.99□□□□□ -0.81
UPF3A-212ENST00000619079 TMEM69Q5SWH9 247 aa9.99□□□□□ -0.81
UPF3A-212ENST00000619079 FAM180BQ6P0A1 224 aa9.99□□□□□ -0.81
UPF3A-212ENST00000619079 KRT77Q7Z794 578 aa9.99□□□□□ -0.81
UPF3A-212ENST00000619079 SERPINA12Q8IW75 414 aa9.99□□□□□ -0.81
UPF3A-212ENST00000619079 ING5Q8WYH8 240 aa9.99□□□□□ -0.81
UPF3A-212ENST00000619079 TM4SF18Q96CE8 201 aa9.99□□□□□ -0.81
UPF3A-212ENST00000619079 SAMD8Q96LT4 415 aa9.99□□□□□ -0.81
UPF3A-212ENST00000619079 ZNF334Q9HCZ1 680 aaPredicted RBP9.99□□□□□ -0.81
UPF3A-212ENST00000619079 ZFP57Q9NU63 452 aa9.99□□□□□ -0.81
UPF3A-212ENST00000619079 KLK11Q9UBX7 282 aa9.99□□□□□ -0.81
UPF3A-212ENST00000619079 KIF26AQ9ULI4 1882 aaPredicted RBP9.99□□□□□ -0.81
UPF3A-212ENST00000619079 DOCK6Q96HP0 2047 aa9.99□□□□□ -0.81
UPF3A-212ENST00000619079 SLC5A10A0PJK1 596 aa9.99□□□□□ -0.81
UPF3A-212ENST00000619079 OR2AG2A6NM03 316 aa9.99□□□□□ -0.81
UPF3A-212ENST00000619079 NUDT19A8MXV4 375 aa9.99□□□□□ -0.81
UPF3A-212ENST00000619079 EIF3GO75821 320 aaKnown RBP eCLIP9.99□□□□□ -0.81
UPF3A-212ENST00000619079 CD1AP06126 327 aa9.99□□□□□ -0.81
UPF3A-212ENST00000619079 HEXAP06865 529 aa9.99□□□□□ -0.81
UPF3A-212ENST00000619079 CHRM4P08173 479 aa9.99□□□□□ -0.81
UPF3A-212ENST00000619079 SPP1P10451 314 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms