RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 GTF2IRD2Q86UP8 949 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 KRT73Q86Y46 540 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 SLC43A2Q8N370 569 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 GPR32P1Q8NGA4 272 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 ZNF563Q8TA94 476 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 TAMM41Q96BW9 452 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 RCN3Q96D15 328 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 ARL5BQ96KC2 179 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 ZNF607Q96SK3 696 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 ARHGDIGQ99819 225 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 HOPXQ9BPY8 73 aaPredicted RBP7.36□□□□□ -1.23
NEK3-209ENST00000618856 PSD2Q9BQI7 771 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 TACO1Q9BSH4 297 aaKnown RBP7.36□□□□□ -1.23
NEK3-209ENST00000618856 PCDHAC1Q9H158 963 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 GID8Q9NWU2 228 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 CMTM6Q9NX76 183 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 ELOVL5Q9NYP7 299 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 KLHL13Q9P2N7 655 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 ABCD2Q9UBJ2 740 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 ANGPT4Q9Y264 503 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 AP3M1Q9Y2T2 418 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 TMED7Q9Y3B3 224 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 PKDREJQ9NTG1 2253 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 ZC3H12DA2A288 527 aaKnown RBP7.35□□□□□ -1.23
NEK3-209ENST00000618856 ZNF716A6NP11 495 aa7.35□□□□□ -1.23
NEK3-209ENST00000618856 ZNF724A8MTY0 619 aa7.35□□□□□ -1.23
NEK3-209ENST00000618856 A8MVM7 634 aa7.35□□□□□ -1.23
NEK3-209ENST00000618856 FAM220BPB1ANY3 271 aa7.35□□□□□ -1.23
NEK3-209ENST00000618856 FTCDNL1E5RQL4 147 aa7.35□□□□□ -1.23
NEK3-209ENST00000618856 M0QX08 132 aa7.35□□□□□ -1.23
NEK3-209ENST00000618856 FRS3O43559 492 aa7.35□□□□□ -1.23
NEK3-209ENST00000618856 PRKD3O94806 890 aa7.35□□□□□ -1.23
NEK3-209ENST00000618856 SYNGR4O95473 234 aa7.35□□□□□ -1.23
NEK3-209ENST00000618856 YES1P07947 543 aa7.35□□□□□ -1.23
NEK3-209ENST00000618856 KLK2P20151 261 aa7.35□□□□□ -1.23
NEK3-209ENST00000618856 SLC7A1P30825 629 aa7.35□□□□□ -1.23
NEK3-209ENST00000618856 SSTR2P30874 369 aa7.35□□□□□ -1.23
NEK3-209ENST00000618856 P2RY4P51582 365 aa7.35□□□□□ -1.23
NEK3-209ENST00000618856 CSNK2A1P68400 391 aaPredicted RBP7.35□□□□□ -1.23
NEK3-209ENST00000618856 EGR4Q05215 589 aa7.35□□□□□ -1.23
NEK3-209ENST00000618856 NPTX1Q15818 432 aa7.35□□□□□ -1.23
NEK3-209ENST00000618856 FXNQ16595 210 aa7.35□□□□□ -1.23
NEK3-209ENST00000618856 CYP51A1Q16850 503 aa7.35□□□□□ -1.23
NEK3-209ENST00000618856 MMEL1Q495T6 779 aa7.35□□□□□ -1.23
NEK3-209ENST00000618856 ERICH5Q6P6B1 374 aa7.35□□□□□ -1.23
NEK3-209ENST00000618856 FCRLAQ7L513 359 aa7.35□□□□□ -1.23
NEK3-209ENST00000618856 CPLX4Q7Z7G2 160 aa7.35□□□□□ -1.23
NEK3-209ENST00000618856 ARMC8Q8IUR7 673 aa7.35□□□□□ -1.23
NEK3-209ENST00000618856 MCEMP1Q8IX19 187 aa7.35□□□□□ -1.23
NEK3-209ENST00000618856 SLC15A3Q8IY34 581 aa7.35□□□□□ -1.23
NEK3-209ENST00000618856 POU5F2Q8N7G0 328 aa7.35□□□□□ -1.23
NEK3-209ENST00000618856 ZNF610Q8N9Z0 462 aa7.35□□□□□ -1.23
NEK3-209ENST00000618856 STK35Q8TDR2 534 aa7.35□□□□□ -1.23
NEK3-209ENST00000618856 ABHD3Q8WU67 409 aa7.35□□□□□ -1.23
NEK3-209ENST00000618856 ROBO4Q8WZ75 1007 aa7.35□□□□□ -1.23
NEK3-209ENST00000618856 RNF166Q96A37 237 aaPredicted RBP7.35□□□□□ -1.23
NEK3-209ENST00000618856 OR5B2Q96R09 309 aa7.35□□□□□ -1.23
NEK3-209ENST00000618856 TRIM2Q9C040 744 aa7.35□□□□□ -1.23
NEK3-209ENST00000618856 OR11A1Q9GZK7 315 aa7.35□□□□□ -1.23
NEK3-209ENST00000618856 NSRP1Q9H0G5 558 aaKnown RBP7.35□□□□□ -1.23
NEK3-209ENST00000618856 EFCAB1Q9HAE3 211 aa7.35□□□□□ -1.23
NEK3-209ENST00000618856 GALNT8Q9NY28 637 aa7.35□□□□□ -1.23
NEK3-209ENST00000618856 TMEM181Q9P2C4 612 aa7.35□□□□□ -1.23
NEK3-209ENST00000618856 TESQ9UGI8 421 aaKnown RBP7.35□□□□□ -1.23
NEK3-209ENST00000618856 IGKV1D-42A0A075B6H8 117 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 A0A0B4J2E0 115 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 A0A1B0GWA3 101 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 A0A1B0GX12 115 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 LIPT2A6NK58 231 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 ZNF814B7Z6K7 855 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 SULT2B1O00204 365 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 EIF1BO60739 113 aaKnown RBP7.34□□□□□ -1.23
NEK3-209ENST00000618856 GOSR1O95249 250 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 LYPD3O95274 346 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 THY1P04216 161 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 FESP07332 822 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 AQP1P29972 269 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 CCKARP32238 428 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 NTF4P34130 210 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 CD79BP40259 229 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 COPZ1P61923 177 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 SLC35A1P78382 337 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 HOXC5Q00444 222 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 SWT1Q5T5J6 900 aaKnown RBP7.34□□□□□ -1.23
NEK3-209ENST00000618856 INTS11Q5TA45 600 aaKnown RBP7.34□□□□□ -1.23
NEK3-209ENST00000618856 PAQR6Q6TCH4 344 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 TFAP2EQ6VUC0 442 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 GDF7Q7Z4P5 450 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 ARPINQ7Z6K5 226 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 TSPYL5Q86VY4 417 aaPredicted RBP7.34□□□□□ -1.23
NEK3-209ENST00000618856 KIF18BQ86Y91 864 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 TUSC5Q8IXB3 177 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 GABRG1Q8N1C3 465 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 CNEP1R1Q8N9A8 125 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 ATP6V1C2Q8NEY4 427 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 OR4D11Q8NGI4 311 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 OR6S1Q8NH40 331 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 FAM222BQ8WU58 562 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 DNAJA4Q8WW22 397 aaPredicted RBP7.34□□□□□ -1.23
NEK3-209ENST00000618856 RASSF5Q8WWW0 418 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms