RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 EPHA8P29322 1005 aaPredicted RBP14.39□□□□□ -0.11
NR1H3-235ENST00000616973 PRPS1P60891 318 aa14.39□□□□□ -0.11
NR1H3-235ENST00000616973 GGTLC2Q14390 218 aa14.39□□□□□ -0.11
NR1H3-235ENST00000616973 NSDHLQ15738 373 aa14.39□□□□□ -0.11
NR1H3-235ENST00000616973 APOOLQ6UXV4 268 aa14.39□□□□□ -0.11
NR1H3-235ENST00000616973 CYB561A3Q8NBI2 242 aa14.39□□□□□ -0.11
NR1H3-235ENST00000616973 OR10H4Q8NGA5 316 aa14.39□□□□□ -0.11
NR1H3-235ENST00000616973 AP3S1Q92572 193 aa14.39□□□□□ -0.11
NR1H3-235ENST00000616973 NUDT22Q9BRQ3 303 aa14.39□□□□□ -0.11
NR1H3-235ENST00000616973 TGIF2Q9GZN2 237 aa14.39□□□□□ -0.11
NR1H3-235ENST00000616973 VN1R1Q9GZP7 353 aa14.39□□□□□ -0.11
NR1H3-235ENST00000616973 NRIP3Q9NQ35 241 aa14.39□□□□□ -0.11
NR1H3-235ENST00000616973 IER3IP1Q9Y5U9 82 aa14.39□□□□□ -0.11
NR1H3-235ENST00000616973 SEC16AO15027 2179 aa14.39□□□□□ -0.11
NR1H3-235ENST00000616973 CACNA1EQ15878 2313 aa14.38□□□□□ -0.11
NR1H3-235ENST00000616973 A0A1W2PQD3 144 aa14.38□□□□□ -0.11
NR1H3-235ENST00000616973 MCIDASD6RGH6 385 aa14.38□□□□□ -0.11
NR1H3-235ENST00000616973 RGS5O15539 181 aa14.38□□□□□ -0.11
NR1H3-235ENST00000616973 RNF13O43567 381 aa14.38□□□□□ -0.11
NR1H3-235ENST00000616973 TSPAN2O60636 221 aa14.38□□□□□ -0.11
NR1H3-235ENST00000616973 HIST1H1CP16403 213 aaKnown RBP14.38□□□□□ -0.11
NR1H3-235ENST00000616973 SLC6A8P48029 635 aa14.38□□□□□ -0.11
NR1H3-235ENST00000616973 SLC16A1P53985 500 aa14.38□□□□□ -0.11
NR1H3-235ENST00000616973 TAS2R43P59537 309 aa14.38□□□□□ -0.11
NR1H3-235ENST00000616973 HLA-DQA1Q5Y7H0 255 aa14.38□□□□□ -0.11
NR1H3-235ENST00000616973 C9orf40Q8IXQ3 194 aa14.38□□□□□ -0.11
NR1H3-235ENST00000616973 LRRC17Q8N6Y2 441 aa14.38□□□□□ -0.11
NR1H3-235ENST00000616973 FAM181AQ8N9Y4 354 aa14.38□□□□□ -0.11
NR1H3-235ENST00000616973 GATSQ8NAP1 163 aa14.38□□□□□ -0.11
NR1H3-235ENST00000616973 SYT14Q8NB59 555 aa14.38□□□□□ -0.11
NR1H3-235ENST00000616973 OR52E2Q8NGJ4 325 aa14.38□□□□□ -0.11
NR1H3-235ENST00000616973 OR1N1Q8NGS0 311 aa14.38□□□□□ -0.11
NR1H3-235ENST00000616973 SMPDL3BQ92485 455 aa14.38□□□□□ -0.11
NR1H3-235ENST00000616973 TMED9Q9BVK6 235 aa14.38□□□□□ -0.11
NR1H3-235ENST00000616973 RERGLQ9H628 205 aa14.38□□□□□ -0.11
NR1H3-235ENST00000616973 V9GYH0 126 aa14.38□□□□□ -0.11
NR1H3-235ENST00000616973 PI4KAP42356 2102 aa14.38□□□□□ -0.11
NR1H3-235ENST00000616973 DNAH14Q0VDD8 3507 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 ANKRD34CP0C6C1 535 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 CLUP10909 449 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 DEFA1P59665 94 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 DEFA3P59666 94 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 ZNF85Q03923 595 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 CSTF1Q05048 431 aaKnown RBP14.37□□□□□ -0.11
NR1H3-235ENST00000616973 TRAM1Q15629 374 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.37□□□□□ -0.11
NR1H3-235ENST00000616973 LCN1P1Q5VSP4 162 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 RHBDD2Q6NTF9 364 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 CBLN3Q6UW01 205 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 TMEM91Q6ZNR0 172 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 RABEPKQ7Z6M1 372 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 MARCH9Q86YJ5 346 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 LAX1Q8IWV1 398 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 POC5Q8NA72 575 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 POMGNT2Q8NAT1 580 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 FAM98AQ8NCA5 519 aaKnown RBP14.37□□□□□ -0.11
NR1H3-235ENST00000616973 C17orf47Q8NEP4 570 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 ADOQ96SZ5 270 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 DDOQ99489 341 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 WWTR1Q9GZV5 400 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 POLE4Q9NR33 117 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 COPS7AQ9UBW8 275 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 FBXL4Q9UKA2 621 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 NOX1Q9Y5S8 564 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 EXPH5Q8NEV8 1989 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 A0A1B0GTQ1 180 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 PLPP2O43688 288 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 ICOSLGO75144 302 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 RGS9O75916 674 aaPredicted RBP14.37□□□□□ -0.11
NR1H3-235ENST00000616973 ATXN8OSP0DMR3 200 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 IL12BP29460 328 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 TGM4P49221 684 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 DHPSP49366 369 aaPredicted RBP14.37□□□□□ -0.11
NR1H3-235ENST00000616973 PNLIPRP2P54317 469 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 LGALS3BPQ08380 585 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 NR0B2Q15466 257 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 SLC35D3Q5M8T2 416 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 C1orf189Q5VU69 101 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 COX15Q7KZN9 410 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 SLC29A4Q7RTT9 530 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 ZNF441Q8N8Z8 693 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 SDR9C7Q8NEX9 313 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 OR4K13Q8NH42 304 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 OR5W2Q8NH69 310 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 NEIL3Q8TAT5 605 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 GAL3ST4Q96RP7 486 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 DCLRE1CQ96SD1 692 aaKnown RBP14.37□□□□□ -0.11
NR1H3-235ENST00000616973 TBX5Q99593 518 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 NEURL2Q9BR09 285 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 HDHD5Q9BXW7 423 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 ADAM19Q9H013 955 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 KCNN2Q9H2S1 579 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 MIXL1Q9H2W2 232 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 ZNF229Q9UJW7 825 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 HIF3AQ9Y2N7 669 aa14.37□□□□□ -0.11
NR1H3-235ENST00000616973 SIRT4Q9Y6E7 314 aaPredicted RBP14.37□□□□□ -0.11
NR1H3-235ENST00000616973 IGLV3-12A0A075B6K2 115 aa14.36□□□□□ -0.11
NR1H3-235ENST00000616973 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.36□□□□□ -0.11
NR1H3-235ENST00000616973 LRRN3E7EW58 273 aa14.36□□□□□ -0.11
NR1H3-235ENST00000616973 CASKO14936 926 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms