RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 CTBP2P56545 445 aa10.36□□□□□ -0.75
SLIRP-212ENST00000613856 PLPPR5Q32ZL2 321 aa10.36□□□□□ -0.75
SLIRP-212ENST00000613856 TIGD3Q6B0B8 471 aa10.36□□□□□ -0.75
SLIRP-212ENST00000613856 C1orf94Q6P1W5 598 aa10.36□□□□□ -0.75
SLIRP-212ENST00000613856 CD300LDQ6UXZ3 194 aa10.36□□□□□ -0.75
SLIRP-212ENST00000613856 LINC00696Q6ZRV3 163 aa10.36□□□□□ -0.75
SLIRP-212ENST00000613856 AQP11Q8NBQ7 271 aa10.36□□□□□ -0.75
SLIRP-212ENST00000613856 OR4K17Q8NGC6 315 aa10.36□□□□□ -0.75
SLIRP-212ENST00000613856 PIGXQ8TBF5 258 aa10.36□□□□□ -0.75
SLIRP-212ENST00000613856 TMEM255BQ8WV15 326 aa10.36□□□□□ -0.75
SLIRP-212ENST00000613856 TMEM239Q8WW34 195 aa10.36□□□□□ -0.75
SLIRP-212ENST00000613856 HAS2Q92819 552 aa10.36□□□□□ -0.75
SLIRP-212ENST00000613856 ZNF524Q96C55 264 aa10.36□□□□□ -0.75
SLIRP-212ENST00000613856 SNRNP40Q96DI7 357 aaKnown RBP10.36□□□□□ -0.75
SLIRP-212ENST00000613856 C1GALT1C1Q96EU7 318 aa10.36□□□□□ -0.75
SLIRP-212ENST00000613856 DTNBP1Q96EV8 351 aa10.36□□□□□ -0.75
SLIRP-212ENST00000613856 FEVQ99581 238 aa10.36□□□□□ -0.75
SLIRP-212ENST00000613856 TMEM43Q9BTV4 400 aa10.36□□□□□ -0.75
SLIRP-212ENST00000613856 DSN1Q9H410 356 aa10.36□□□□□ -0.75
SLIRP-212ENST00000613856 PTGES2Q9H7Z7 377 aa10.36□□□□□ -0.75
SLIRP-212ENST00000613856 KRT84Q9NSB2 600 aa10.36□□□□□ -0.75
SLIRP-212ENST00000613856 MED17Q9NVC6 651 aa10.36□□□□□ -0.75
SLIRP-212ENST00000613856 MED11Q9P086 117 aa10.36□□□□□ -0.75
SLIRP-212ENST00000613856 ENOPH1Q9UHY7 261 aa10.36□□□□□ -0.75
SLIRP-212ENST00000613856 TMEM5Q9Y2B1 443 aa10.36□□□□□ -0.75
SLIRP-212ENST00000613856 POFUT2Q9Y2G5 429 aa10.36□□□□□ -0.75
SLIRP-212ENST00000613856 PCDHGA9Q9Y5G4 932 aaKnown RBP10.36□□□□□ -0.75
SLIRP-212ENST00000613856 ORC6Q9Y5N6 252 aa10.36□□□□□ -0.75
SLIRP-212ENST00000613856 NCKAP5O14513 1909 aa10.35□□□□□ -0.75
SLIRP-212ENST00000613856 ZFHX3Q15911 3703 aa10.35□□□□□ -0.75
SLIRP-212ENST00000613856 A0A0G2JMM0 328 aa10.35□□□□□ -0.75
SLIRP-212ENST00000613856 A0A1W2PPB8 328 aa10.35□□□□□ -0.75
SLIRP-212ENST00000613856 A0A1W2PRS3 328 aa10.35□□□□□ -0.75
SLIRP-212ENST00000613856 C2orf72A6NCS6 295 aa10.35□□□□□ -0.75
SLIRP-212ENST00000613856 LRRC3CA6NJW4 275 aa10.35□□□□□ -0.75
SLIRP-212ENST00000613856 A6NL46 340 aa10.35□□□□□ -0.75
SLIRP-212ENST00000613856 ELOA3DA6NLF2 546 aaPredicted RBP10.35□□□□□ -0.75
SLIRP-212ENST00000613856 KIR3DP1A8MWS1 328 aa10.35□□□□□ -0.75
SLIRP-212ENST00000613856 FAM47E-STBD1D6RA91 191 aa10.35□□□□□ -0.75
SLIRP-212ENST00000613856 KLF4O43474 513 aa10.35□□□□□ -0.75
SLIRP-212ENST00000613856 NME2P1O60361 137 aa10.35□□□□□ -0.75
SLIRP-212ENST00000613856 NME2P22392 152 aa10.35□□□□□ -0.75
SLIRP-212ENST00000613856 FPR3P25089 353 aa10.35□□□□□ -0.75
SLIRP-212ENST00000613856 TACR3P29371 465 aa10.35□□□□□ -0.75
SLIRP-212ENST00000613856 OMPP47874 163 aa10.35□□□□□ -0.75
SLIRP-212ENST00000613856 GSSP48637 474 aa10.35□□□□□ -0.75
SLIRP-212ENST00000613856 MASP1P48740 699 aa10.35□□□□□ -0.75
SLIRP-212ENST00000613856 POLR2HP52434 150 aaKnown RBP10.35□□□□□ -0.75
SLIRP-212ENST00000613856 MAP2K6P52564 334 aa10.35□□□□□ -0.75
SLIRP-212ENST00000613856 PRKCDQ05655 676 aa10.35□□□□□ -0.75
SLIRP-212ENST00000613856 COX10Q12887 443 aa10.35□□□□□ -0.75
SLIRP-212ENST00000613856 TOMM34Q15785 309 aaPredicted RBP10.35□□□□□ -0.75
SLIRP-212ENST00000613856 ELOA3BQ3SY89 546 aa10.35□□□□□ -0.75
SLIRP-212ENST00000613856 NHSL2Q5HYW2 709 aa10.35□□□□□ -0.75
SLIRP-212ENST00000613856 ANKRD34AQ69YU3 496 aa10.35□□□□□ -0.75
SLIRP-212ENST00000613856 OR5M10Q6IEU7 315 aa10.35□□□□□ -0.75
SLIRP-212ENST00000613856 TTC33Q6PID6 262 aaPredicted RBP10.35□□□□□ -0.75
SLIRP-212ENST00000613856 C5orf46Q6UWT4 87 aa10.35□□□□□ -0.75
SLIRP-212ENST00000613856 RRM2BQ7LG56 351 aa10.35□□□□□ -0.75
SLIRP-212ENST00000613856 ZER1Q7Z7L7 766 aa10.35□□□□□ -0.75
SLIRP-212ENST00000613856 NRMQ8IXM6 262 aa10.35□□□□□ -0.75
SLIRP-212ENST00000613856 ELOA3Q8NG57 546 aa10.35□□□□□ -0.75
SLIRP-212ENST00000613856 OR1J4Q8NGS1 313 aa10.35□□□□□ -0.75
SLIRP-212ENST00000613856 MARVELD3Q96A59 401 aa10.35□□□□□ -0.75
SLIRP-212ENST00000613856 ZBTB8AQ96BR9 441 aa10.35□□□□□ -0.75
SLIRP-212ENST00000613856 SCMH1Q96GD3 660 aa10.35□□□□□ -0.75
SLIRP-212ENST00000613856 MRGPRX4Q96LA9 322 aa10.35□□□□□ -0.75
SLIRP-212ENST00000613856 SIGLEC12Q96PQ1 595 aa10.35□□□□□ -0.75
SLIRP-212ENST00000613856 SMAD5Q99717 465 aaKnown RBP10.35□□□□□ -0.75
SLIRP-212ENST00000613856 FAM173AQ9BQD7 235 aa10.35□□□□□ -0.75
SLIRP-212ENST00000613856 GABARAPL3Q9BY60 117 aa10.35□□□□□ -0.75
SLIRP-212ENST00000613856 ZNF556Q9HAH1 456 aa10.35□□□□□ -0.75
SLIRP-212ENST00000613856 PAPOLBQ9NRJ5 636 aaKnown RBP10.35□□□□□ -0.75
SLIRP-212ENST00000613856 DEPPQ9NTK1 212 aa10.35□□□□□ -0.75
SLIRP-212ENST00000613856 OSGIN1Q9UJX0 560 aa10.35□□□□□ -0.75
SLIRP-212ENST00000613856 FBXL2Q9UKC9 423 aa10.35□□□□□ -0.75
SLIRP-212ENST00000613856 RAB26Q9ULW5 256 aa10.35□□□□□ -0.75
SLIRP-212ENST00000613856 BOKQ9UMX3 212 aaPredicted RBP10.35□□□□□ -0.75
SLIRP-212ENST00000613856 KLF13Q9Y2Y9 288 aaPredicted RBP10.35□□□□□ -0.75
SLIRP-212ENST00000613856 MED31Q9Y3C7 131 aa10.35□□□□□ -0.75
SLIRP-212ENST00000613856 LRRC42Q9Y546 428 aa10.35□□□□□ -0.75
SLIRP-212ENST00000613856 MED13LQ71F56 2210 aa10.34□□□□□ -0.75
SLIRP-212ENST00000613856 IGKV1D-42A0A075B6H8 117 aa10.34□□□□□ -0.75
SLIRP-212ENST00000613856 H0YAE9 185 aa10.34□□□□□ -0.75
SLIRP-212ENST00000613856 GNB5O14775 395 aa10.34□□□□□ -0.75
SLIRP-212ENST00000613856 PIP5K1CO60331 668 aa10.34□□□□□ -0.75
SLIRP-212ENST00000613856 CBR3O75828 277 aa10.34□□□□□ -0.75
SLIRP-212ENST00000613856 GASTP01350 101 aa10.34□□□□□ -0.75
SLIRP-212ENST00000613856 CD46P15529 392 aa10.34□□□□□ -0.75
SLIRP-212ENST00000613856 GSTM3P21266 225 aa10.34□□□□□ -0.75
SLIRP-212ENST00000613856 ADH6P28332 368 aa10.34□□□□□ -0.75
SLIRP-212ENST00000613856 APOBEC1P41238 236 aaKnown RBP10.34□□□□□ -0.75
SLIRP-212ENST00000613856 EIF1P41567 113 aaKnown RBP10.34□□□□□ -0.75
SLIRP-212ENST00000613856 DNASE1L1P49184 302 aa10.34□□□□□ -0.75
SLIRP-212ENST00000613856 DSCR4P56555 118 aaPredicted RBP10.34□□□□□ -0.75
SLIRP-212ENST00000613856 ARG2P78540 354 aa10.34□□□□□ -0.75
SLIRP-212ENST00000613856 FOXO1Q12778 655 aa10.34□□□□□ -0.75
SLIRP-212ENST00000613856 FOXF1Q12946 379 aa10.34□□□□□ -0.75
SLIRP-212ENST00000613856 TSPAN31Q12999 210 aa10.34□□□□□ -0.75
SLIRP-212ENST00000613856 PLEKHN1Q494U1 663 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms