RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, human

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBE1-208	ENST00000604743	KRT34	O76011	436 aa		12.82	□□□□□ -0.36
TUBE1-208	ENST00000604743	PMS2P2	O95744	297 aa		12.82	□□□□□ -0.36
TUBE1-208	ENST00000604743	FKBP2	P26885	142 aa	Known RBP	12.82	□□□□□ -0.36
TUBE1-208	ENST00000604743	CLK1	P49759	484 aa	Known RBP	12.82	□□□□□ -0.36
TUBE1-208	ENST00000604743	GLIPR1L2	Q4G1C9	344 aa		12.82	□□□□□ -0.36
TUBE1-208	ENST00000604743	MTDH	Q86UE4	582 aa	Known RBP	12.82	□□□□□ -0.36
TUBE1-208	ENST00000604743	CDC20B	Q86Y33	519 aa		12.82	□□□□□ -0.36
TUBE1-208	ENST00000604743	CCDC103	Q8IW40	242 aa		12.82	□□□□□ -0.36
TUBE1-208	ENST00000604743	HIPK4	Q8NE63	616 aa		12.82	□□□□□ -0.36
TUBE1-208	ENST00000604743	ZNF607	Q96SK3	696 aa		12.82	□□□□□ -0.36
TUBE1-208	ENST00000604743	RSPO3	Q9BXY4	272 aa	Predicted RBP	12.82	□□□□□ -0.36
TUBE1-208	ENST00000604743	ADAM19	Q9H013	955 aa		12.82	□□□□□ -0.36
TUBE1-208	ENST00000604743	LIME1	Q9H400	295 aa		12.82	□□□□□ -0.36
TUBE1-208	ENST00000604743	TMEM38A	Q9H6F2	299 aa		12.82	□□□□□ -0.36
TUBE1-208	ENST00000604743	FANCF	Q9NPI8	374 aa		12.82	□□□□□ -0.36
TUBE1-208	ENST00000604743	C6orf203	Q9P0P8	240 aa	Predicted RBP	12.82	□□□□□ -0.36
TUBE1-208	ENST00000604743	RPS6KB2	Q9UBS0	482 aa		12.82	□□□□□ -0.36
TUBE1-208	ENST00000604743	ING1	Q9UK53	422 aa	Predicted RBP	12.82	□□□□□ -0.36
TUBE1-208	ENST00000604743	TESMIN	Q9Y4I5	508 aa		12.82	□□□□□ -0.36
TUBE1-208	ENST00000604743	GMEB1	Q9Y692	573 aa		12.82	□□□□□ -0.36
TUBE1-208	ENST00000604743	FAM221A	A4D161	298 aa		12.81	□□□□□ -0.36
TUBE1-208	ENST00000604743	MRAS	O14807	208 aa		12.81	□□□□□ -0.36
TUBE1-208	ENST00000604743	ZNF208	O43345	1280 aa		12.81	□□□□□ -0.36
TUBE1-208	ENST00000604743	SERPINB7	O75635	380 aa		12.81	□□□□□ -0.36
TUBE1-208	ENST00000604743	IMPDH2	P12268	514 aa		12.81	□□□□□ -0.36
TUBE1-208	ENST00000604743	PRKAR1B	P31321	381 aa		12.81	□□□□□ -0.36
TUBE1-208	ENST00000604743	CYLC2	Q14093	348 aa	Predicted RBP	12.81	□□□□□ -0.36
TUBE1-208	ENST00000604743	MAPRE2	Q15555	327 aa		12.81	□□□□□ -0.36
TUBE1-208	ENST00000604743	TSC22D1	Q15714	1073 aa		12.81	□□□□□ -0.36
TUBE1-208	ENST00000604743	TRMT5	Q32P41	509 aa	Known RBP	12.81	□□□□□ -0.36
TUBE1-208	ENST00000604743	REP15	Q6BDI9	236 aa		12.81	□□□□□ -0.36
TUBE1-208	ENST00000604743	ALKBH2	Q6NS38	261 aa		12.81	□□□□□ -0.36
TUBE1-208	ENST00000604743	TFAP2E	Q6VUC0	442 aa		12.81	□□□□□ -0.36
TUBE1-208	ENST00000604743	STAC2	Q6ZMT1	411 aa		12.81	□□□□□ -0.36
TUBE1-208	ENST00000604743	CXorf67	Q86X51	503 aa	Predicted RBP	12.81	□□□□□ -0.36
TUBE1-208	ENST00000604743	SNX32	Q86XE0	403 aa		12.81	□□□□□ -0.36
TUBE1-208	ENST00000604743	PTOV1	Q86YD1	416 aa		12.81	□□□□□ -0.36
TUBE1-208	ENST00000604743	C11orf65	Q8NCR3	313 aa		12.81	□□□□□ -0.36
TUBE1-208	ENST00000604743	OR10A6	Q8NH74	314 aa		12.81	□□□□□ -0.36
TUBE1-208	ENST00000604743	C10orf82	Q8WW14	230 aa		12.81	□□□□□ -0.36
TUBE1-208	ENST00000604743	ZNF317	Q96PQ6	595 aa	Predicted RBP	12.81	□□□□□ -0.36
TUBE1-208	ENST00000604743	TACO1	Q9BSH4	297 aa	Known RBP	12.81	□□□□□ -0.36
TUBE1-208	ENST00000604743	PRR14	Q9BWN1	585 aa		12.81	□□□□□ -0.36
TUBE1-208	ENST00000604743	BCO1	Q9HAY6	547 aa		12.81	□□□□□ -0.36
TUBE1-208	ENST00000604743	GP6	Q9HCN6	339 aa		12.81	□□□□□ -0.36
TUBE1-208	ENST00000604743	ZNF226	Q9NYT6	803 aa		12.81	□□□□□ -0.36
TUBE1-208	ENST00000604743	ARMCX1	Q9P291	453 aa		12.81	□□□□□ -0.36
TUBE1-208	ENST00000604743	SLC13A4	Q9UKG4	626 aa		12.81	□□□□□ -0.36
TUBE1-208	ENST00000604743	CAPN7	Q9Y6W3	813 aa		12.81	□□□□□ -0.36
TUBE1-208	ENST00000604743	ENO4	A6NNW6	628 aa		12.8	□□□□□ -0.36
TUBE1-208	ENST00000604743	ZNF814	B7Z6K7	855 aa		12.8	□□□□□ -0.36
TUBE1-208	ENST00000604743	RAMP1	O60894	148 aa		12.8	□□□□□ -0.36
TUBE1-208	ENST00000604743	OPN1SW	P03999	348 aa		12.8	□□□□□ -0.36
TUBE1-208	ENST00000604743	FPR1	P21462	350 aa		12.8	□□□□□ -0.36
TUBE1-208	ENST00000604743	IDUA	P35475	653 aa		12.8	□□□□□ -0.36
TUBE1-208	ENST00000604743	SLC35A1	P78382	337 aa		12.8	□□□□□ -0.36
TUBE1-208	ENST00000604743	CEACAM7	Q14002	265 aa		12.8	□□□□□ -0.36
TUBE1-208	ENST00000604743	OR7A5	Q15622	319 aa		12.8	□□□□□ -0.36
TUBE1-208	ENST00000604743	ABLIM2	Q6H8Q1	611 aa		12.8	□□□□□ -0.36
TUBE1-208	ENST00000604743	NANOGP8	Q6NSW7	305 aa		12.8	□□□□□ -0.36
TUBE1-208	ENST00000604743	DHRS4L2	Q6PKH6	230 aa		12.8	□□□□□ -0.36
TUBE1-208	ENST00000604743	C22orf34	Q6ZV56	151 aa		12.8	□□□□□ -0.36
TUBE1-208	ENST00000604743	GALNT5	Q7Z7M9	940 aa		12.8	□□□□□ -0.36
TUBE1-208	ENST00000604743	COMTD1	Q86VU5	262 aa		12.8	□□□□□ -0.36
TUBE1-208	ENST00000604743	ARMC8	Q8IUR7	673 aa		12.8	□□□□□ -0.36
TUBE1-208	ENST00000604743	ZNF100	Q8IYN0	542 aa		12.8	□□□□□ -0.36
TUBE1-208	ENST00000604743	SMYD1	Q8NB12	490 aa		12.8	□□□□□ -0.36
TUBE1-208	ENST00000604743	RNF217	Q8TC41	542 aa		12.8	□□□□□ -0.36
TUBE1-208	ENST00000604743	C3orf49	Q96BT1	292 aa		12.8	□□□□□ -0.36
TUBE1-208	ENST00000604743	LRRC58	Q96CX6	371 aa		12.8	□□□□□ -0.36
TUBE1-208	ENST00000604743	NAA11	Q9BSU3	229 aa	Predicted RBP	12.8	□□□□□ -0.36
TUBE1-208	ENST00000604743	KAT8	Q9H7Z6	458 aa	Known RBP	12.8	□□□□□ -0.36
TUBE1-208	ENST00000604743	NANOG	Q9H9S0	305 aa		12.8	□□□□□ -0.36
TUBE1-208	ENST00000604743	MRGBP	Q9NV56	204 aa		12.8	□□□□□ -0.36
TUBE1-208	ENST00000604743	EMC3	Q9P0I2	261 aa		12.8	□□□□□ -0.36
TUBE1-208	ENST00000604743	PRSS50	Q9UI38	385 aa		12.8	□□□□□ -0.36
TUBE1-208	ENST00000604743	TRAPPC4	Q9Y296	219 aa		12.8	□□□□□ -0.36
TUBE1-208	ENST00000604743	AKAP9	Q99996	3911 aa		12.8	□□□□□ -0.36
TUBE1-208	ENST00000604743	PRORSD1P	A6NEY8	169 aa		12.79	□□□□□ -0.36
TUBE1-208	ENST00000604743	ELOA3D	A6NLF2	546 aa	Predicted RBP	12.79	□□□□□ -0.36
TUBE1-208	ENST00000604743	ZNF724	A8MTY0	619 aa		12.79	□□□□□ -0.36
TUBE1-208	ENST00000604743		A8MVM7	634 aa		12.79	□□□□□ -0.36
TUBE1-208	ENST00000604743		M0QX08	132 aa		12.79	□□□□□ -0.36
TUBE1-208	ENST00000604743	AKR7A3	O95154	331 aa		12.79	□□□□□ -0.36
TUBE1-208	ENST00000604743	ADA	P00813	363 aa		12.79	□□□□□ -0.36
TUBE1-208	ENST00000604743	HRG	P04196	525 aa		12.79	□□□□□ -0.36
TUBE1-208	ENST00000604743	EDNRA	P25101	427 aa		12.79	□□□□□ -0.36
TUBE1-208	ENST00000604743	DNAJA1	P31689	397 aa	Known RBP	12.79	□□□□□ -0.36
TUBE1-208	ENST00000604743	PCYT1A	P49585	367 aa		12.79	□□□□□ -0.36
TUBE1-208	ENST00000604743	MAP2K6	P52564	334 aa		12.79	□□□□□ -0.36
TUBE1-208	ENST00000604743	RGS8	P57771	180 aa	Predicted RBP	12.79	□□□□□ -0.36
TUBE1-208	ENST00000604743	NCALD	P61601	193 aa		12.79	□□□□□ -0.36
TUBE1-208	ENST00000604743	DMTN	Q08495	405 aa		12.79	□□□□□ -0.36
TUBE1-208	ENST00000604743	RBBP4	Q09028	425 aa		12.79	□□□□□ -0.36
TUBE1-208	ENST00000604743	ELOA3B	Q3SY89	546 aa		12.79	□□□□□ -0.36
TUBE1-208	ENST00000604743	RABL3	Q5HYI8	236 aa		12.79	□□□□□ -0.36
TUBE1-208	ENST00000604743	POU5F2	Q8N7G0	328 aa		12.79	□□□□□ -0.36
TUBE1-208	ENST00000604743	ELOA3	Q8NG57	546 aa		12.79	□□□□□ -0.36
TUBE1-208	ENST00000604743	OR52E4	Q8NGH9	312 aa		12.79	□□□□□ -0.36
TUBE1-208	ENST00000604743	PIGX	Q8TBF5	258 aa		12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms