RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 BPIFA2Q96DR5 249 aa12.22□□□□□ -0.45
VMP1-217ENST00000593168 TMEM41AQ96HV5 264 aa12.22□□□□□ -0.45
VMP1-217ENST00000593168 APOL4Q9BPW4 351 aa12.22□□□□□ -0.45
VMP1-217ENST00000593168 KLHDC3Q9BQ90 382 aa12.22□□□□□ -0.45
VMP1-217ENST00000593168 DSN1Q9H410 356 aa12.22□□□□□ -0.45
VMP1-217ENST00000593168 PROK2Q9HC23 129 aa12.22□□□□□ -0.45
VMP1-217ENST00000593168 PNPLA3Q9NST1 481 aa12.22□□□□□ -0.45
VMP1-217ENST00000593168 MED11Q9P086 117 aa12.22□□□□□ -0.45
VMP1-217ENST00000593168 OSGIN1Q9UJX0 560 aa12.22□□□□□ -0.45
VMP1-217ENST00000593168 PCNX3Q9H6A9 2034 aa12.21□□□□□ -0.45
VMP1-217ENST00000593168 ARGFXA6NJG6 315 aa12.21□□□□□ -0.45
VMP1-217ENST00000593168 ZAR1LA6NP61 321 aa12.21□□□□□ -0.45
VMP1-217ENST00000593168 SNPHO15079 494 aa12.21□□□□□ -0.45
VMP1-217ENST00000593168 CXCR1P25024 350 aa12.21□□□□□ -0.45
VMP1-217ENST00000593168 CD97P48960 835 aa12.21□□□□□ -0.45
VMP1-217ENST00000593168 POLR2HP52434 150 aaKnown RBP12.21□□□□□ -0.45
VMP1-217ENST00000593168 CHN2P52757 468 aa12.21□□□□□ -0.45
VMP1-217ENST00000593168 TPD52P55327 224 aaPredicted RBP12.21□□□□□ -0.45
VMP1-217ENST00000593168 ISL1P61371 349 aa12.21□□□□□ -0.45
VMP1-217ENST00000593168 RAPSNQ13702 412 aa12.21□□□□□ -0.45
VMP1-217ENST00000593168 SLC25A53Q5H9E4 307 aa12.21□□□□□ -0.45
VMP1-217ENST00000593168 PRAMEF20Q5VT98 475 aa12.21□□□□□ -0.45
VMP1-217ENST00000593168 OR5M10Q6IEU7 315 aa12.21□□□□□ -0.45
VMP1-217ENST00000593168 PLCZ1Q86YW0 608 aa12.21□□□□□ -0.45
VMP1-217ENST00000593168 WDSUB1Q8N9V3 476 aa12.21□□□□□ -0.45
VMP1-217ENST00000593168 YTHDF1Q9BYJ9 559 aaKnown RBP12.21□□□□□ -0.45
VMP1-217ENST00000593168 PTGES2Q9H7Z7 377 aa12.21□□□□□ -0.45
VMP1-217ENST00000593168 SACM1LQ9NTJ5 587 aa12.21□□□□□ -0.45
VMP1-217ENST00000593168 C20orf141Q9NUB4 165 aa12.21□□□□□ -0.45
VMP1-217ENST00000593168 MED17Q9NVC6 651 aa12.21□□□□□ -0.45
VMP1-217ENST00000593168 IL20Q9NYY1 176 aa12.21□□□□□ -0.45
VMP1-217ENST00000593168 POLHQ9Y253 713 aa12.21□□□□□ -0.45
VMP1-217ENST00000593168 PCDHGB5Q9Y5G0 923 aa12.21□□□□□ -0.45
VMP1-217ENST00000593168 MED13Q9UHV7 2174 aa12.2□□□□□ -0.46
VMP1-217ENST00000593168 ICE1Q9Y2F5 2266 aa12.2□□□□□ -0.46
VMP1-217ENST00000593168 IGKV1D-42A0A075B6H8 117 aa12.2□□□□□ -0.46
VMP1-217ENST00000593168 TMED7-TICAM2A0A0A6YYA0 188 aa12.2□□□□□ -0.46
VMP1-217ENST00000593168 MAGEA13PA6NCF6 341 aa12.2□□□□□ -0.46
VMP1-217ENST00000593168 UNC119BA6NIH7 251 aa12.2□□□□□ -0.46
VMP1-217ENST00000593168 EFCAB9A8MZ26 197 aa12.2□□□□□ -0.46
VMP1-217ENST00000593168 B4DXG7 233 aa12.2□□□□□ -0.46
VMP1-217ENST00000593168 H3BN98 237 aa12.2□□□□□ -0.46
VMP1-217ENST00000593168 K7EM74 188 aa12.2□□□□□ -0.46
VMP1-217ENST00000593168 GMFGO60234 142 aa12.2□□□□□ -0.46
VMP1-217ENST00000593168 P04436 131 aa12.2□□□□□ -0.46
VMP1-217ENST00000593168 PRKCAP17252 672 aa12.2□□□□□ -0.46
VMP1-217ENST00000593168 MAKP20794 623 aa12.2□□□□□ -0.46
VMP1-217ENST00000593168 POU1F1P28069 291 aa12.2□□□□□ -0.46
VMP1-217ENST00000593168 CD96P40200 585 aa12.2□□□□□ -0.46
VMP1-217ENST00000593168 APOBEC1P41238 236 aaKnown RBP12.2□□□□□ -0.46
VMP1-217ENST00000593168 GPR4P46093 362 aa12.2□□□□□ -0.46
VMP1-217ENST00000593168 GIPRP48546 466 aa12.2□□□□□ -0.46
VMP1-217ENST00000593168 ST13P50502 369 aaKnown RBP12.2□□□□□ -0.46
VMP1-217ENST00000593168 MAP2K6P52564 334 aa12.2□□□□□ -0.46
VMP1-217ENST00000593168 MLLT10P55197 1068 aa12.2□□□□□ -0.46
VMP1-217ENST00000593168 NUP107P57740 925 aa12.2□□□□□ -0.46
VMP1-217ENST00000593168 OC90Q02509 493 aaPredicted RBP12.2□□□□□ -0.46
VMP1-217ENST00000593168 CRYZQ08257 329 aaKnown RBP12.2□□□□□ -0.46
VMP1-217ENST00000593168 SLX4IPQ5VYV7 408 aa12.2□□□□□ -0.46
VMP1-217ENST00000593168 TIGD3Q6B0B8 471 aa12.2□□□□□ -0.46
VMP1-217ENST00000593168 RPL13AP3Q6NVV1 102 aa12.2□□□□□ -0.46
VMP1-217ENST00000593168 ISLR2Q6UXK2 745 aa12.2□□□□□ -0.46
VMP1-217ENST00000593168 Q6ZPB1 254 aaPredicted RBP12.2□□□□□ -0.46
VMP1-217ENST00000593168 MDGA2Q7Z553 956 aa12.2□□□□□ -0.46
VMP1-217ENST00000593168 ZNF227Q86WZ6 799 aa12.2□□□□□ -0.46
VMP1-217ENST00000593168 MEX3DQ86XN8 651 aaKnown RBP12.2□□□□□ -0.46
VMP1-217ENST00000593168 ADGRG3Q86Y34 549 aa12.2□□□□□ -0.46
VMP1-217ENST00000593168 KIF18BQ86Y91 864 aa12.2□□□□□ -0.46
VMP1-217ENST00000593168 DEPDC4Q8N2C3 294 aa12.2□□□□□ -0.46
VMP1-217ENST00000593168 OR4K17Q8NGC6 315 aa12.2□□□□□ -0.46
VMP1-217ENST00000593168 FBLIM1Q8WUP2 373 aa12.2□□□□□ -0.46
VMP1-217ENST00000593168 LIPHQ8WWY8 451 aa12.2□□□□□ -0.46
VMP1-217ENST00000593168 OSTF1Q92882 214 aa12.2□□□□□ -0.46
VMP1-217ENST00000593168 SGTBQ96EQ0 304 aa12.2□□□□□ -0.46
VMP1-217ENST00000593168 MRGPRX4Q96LA9 322 aa12.2□□□□□ -0.46
VMP1-217ENST00000593168 UTP23Q9BRU9 249 aaKnown RBP12.2□□□□□ -0.46
VMP1-217ENST00000593168 ING2Q9H160 280 aa12.2□□□□□ -0.46
VMP1-217ENST00000593168 TIMMDC1Q9NPL8 285 aa12.2□□□□□ -0.46
VMP1-217ENST00000593168 LRFN1Q9P244 771 aa12.2□□□□□ -0.46
VMP1-217ENST00000593168 TP53TG5Q9Y2B4 290 aa12.2□□□□□ -0.46
VMP1-217ENST00000593168 TMED7Q9Y3B3 224 aa12.2□□□□□ -0.46
VMP1-217ENST00000593168 SPTAN1Q13813 2472 aaKnown RBP12.2□□□□□ -0.46
VMP1-217ENST00000593168 UNC79Q9P2D8 2635 aa12.19□□□□□ -0.46
VMP1-217ENST00000593168 A0A087WZY1 265 aa12.19□□□□□ -0.46
VMP1-217ENST00000593168 ENO4A6NNW6 628 aa12.19□□□□□ -0.46
VMP1-217ENST00000593168 FAM47E-STBD1D6RA91 191 aa12.19□□□□□ -0.46
VMP1-217ENST00000593168 KPNA4O00629 521 aaPredicted RBP12.19□□□□□ -0.46
VMP1-217ENST00000593168 CDC42EP2O14613 210 aa12.19□□□□□ -0.46
VMP1-217ENST00000593168 GNB5O14775 395 aa12.19□□□□□ -0.46
VMP1-217ENST00000593168 PTP4A3O75365 173 aa12.19□□□□□ -0.46
VMP1-217ENST00000593168 TRIM3O75382 744 aaPredicted RBP12.19□□□□□ -0.46
VMP1-217ENST00000593168 RCBTB2O95199 551 aa12.19□□□□□ -0.46
VMP1-217ENST00000593168 SOX14O95416 240 aa12.19□□□□□ -0.46
VMP1-217ENST00000593168 LYNP07948 512 aa12.19□□□□□ -0.46
VMP1-217ENST00000593168 IGFBP1P08833 259 aaPredicted RBP12.19□□□□□ -0.46
VMP1-217ENST00000593168 CNR1P21554 472 aa12.19□□□□□ -0.46
VMP1-217ENST00000593168 ADH6P28332 368 aa12.19□□□□□ -0.46
VMP1-217ENST00000593168 SLC9A3P48764 834 aa12.19□□□□□ -0.46
VMP1-217ENST00000593168 ZNF41P51814 821 aaPredicted RBP12.19□□□□□ -0.46
VMP1-217ENST00000593168 CDC42P60953 191 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms