RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 ELOA3DA6NLF2 546 aaPredicted RBP8.99□□□□□ -0.97
BRCA1-227ENST00000591849 M0QX08 132 aa8.99□□□□□ -0.97
BRCA1-227ENST00000591849 FBP2O00757 339 aa8.99□□□□□ -0.97
BRCA1-227ENST00000591849 AIM2O14862 343 aa8.99□□□□□ -0.97
BRCA1-227ENST00000591849 ZNF208O43345 1280 aa8.99□□□□□ -0.97
BRCA1-227ENST00000591849 FRS3O43559 492 aa8.99□□□□□ -0.97
BRCA1-227ENST00000591849 EIF1BO60739 113 aaKnown RBP8.99□□□□□ -0.97
BRCA1-227ENST00000591849 ADAM11O75078 769 aa8.99□□□□□ -0.97
BRCA1-227ENST00000591849 PMS2P2O95744 297 aa8.99□□□□□ -0.97
BRCA1-227ENST00000591849 IFNA14P01570 189 aa8.99□□□□□ -0.97
BRCA1-227ENST00000591849 EPXP11678 715 aa8.99□□□□□ -0.97
BRCA1-227ENST00000591849 COX4I1P13073 169 aa8.99□□□□□ -0.97
BRCA1-227ENST00000591849 PRG2P13727 222 aa8.99□□□□□ -0.97
BRCA1-227ENST00000591849 LSP1P33241 339 aa8.99□□□□□ -0.97
BRCA1-227ENST00000591849 IDUAP35475 653 aa8.99□□□□□ -0.97
BRCA1-227ENST00000591849 ACAA2P42765 397 aaKnown RBP8.99□□□□□ -0.97
BRCA1-227ENST00000591849 GYS2P54840 703 aa8.99□□□□□ -0.97
BRCA1-227ENST00000591849 RGS8P57771 180 aaPredicted RBP8.99□□□□□ -0.97
BRCA1-227ENST00000591849 SELPLGQ14242 412 aa8.99□□□□□ -0.97
BRCA1-227ENST00000591849 ELOA3BQ3SY89 546 aa8.99□□□□□ -0.97
BRCA1-227ENST00000591849 ZNF474Q6S9Z5 364 aaPredicted RBP8.99□□□□□ -0.97
BRCA1-227ENST00000591849 BEND4Q6ZU67 534 aa8.99□□□□□ -0.97
BRCA1-227ENST00000591849 ZNF100Q8IYN0 542 aa8.99□□□□□ -0.97
BRCA1-227ENST00000591849 C10orf111Q8N326 155 aa8.99□□□□□ -0.97
BRCA1-227ENST00000591849 ELOA3Q8NG57 546 aa8.99□□□□□ -0.97
BRCA1-227ENST00000591849 OR8J3Q8NGG0 315 aa8.99□□□□□ -0.97
BRCA1-227ENST00000591849 ZNF775Q96BV0 537 aaPredicted RBP8.99□□□□□ -0.97
BRCA1-227ENST00000591849 ARL5BQ96KC2 179 aa8.99□□□□□ -0.97
BRCA1-227ENST00000591849 MED18Q9BUE0 208 aa8.99□□□□□ -0.97
BRCA1-227ENST00000591849 POTEKPQ9BYX7 375 aa8.99□□□□□ -0.97
BRCA1-227ENST00000591849 TRIM2Q9C040 744 aa8.99□□□□□ -0.97
BRCA1-227ENST00000591849 ADAM19Q9H013 955 aa8.99□□□□□ -0.97
BRCA1-227ENST00000591849 KAT8Q9H7Z6 458 aaKnown RBP8.99□□□□□ -0.97
BRCA1-227ENST00000591849 EVA1AQ9H8M9 152 aa8.99□□□□□ -0.97
BRCA1-227ENST00000591849 GP6Q9HCN6 339 aa8.99□□□□□ -0.97
BRCA1-227ENST00000591849 EMC3Q9P0I2 261 aa8.99□□□□□ -0.97
BRCA1-227ENST00000591849 C6orf203Q9P0P8 240 aaPredicted RBP8.99□□□□□ -0.97
BRCA1-227ENST00000591849 KLHL13Q9P2N7 655 aa8.99□□□□□ -0.97
BRCA1-227ENST00000591849 CCDC168Q8NDH2 2452 aa8.99□□□□□ -0.97
BRCA1-227ENST00000591849 ADGRG4Q8IZF6 3080 aa8.99□□□□□ -0.97
BRCA1-227ENST00000591849 INTS1Q8N201 2190 aaKnown RBP8.98□□□□□ -0.97
BRCA1-227ENST00000591849 SH3D21A4FU49 640 aa8.98□□□□□ -0.97
BRCA1-227ENST00000591849 A8MVM7 634 aa8.98□□□□□ -0.97
BRCA1-227ENST00000591849 GPR171O14626 319 aa8.98□□□□□ -0.97
BRCA1-227ENST00000591849 DNPH1O43598 174 aa8.98□□□□□ -0.97
BRCA1-227ENST00000591849 CYTIPO60759 359 aa8.98□□□□□ -0.97
BRCA1-227ENST00000591849 AHSA1O95433 338 aa8.98□□□□□ -0.97
BRCA1-227ENST00000591849 CGAP01215 116 aa8.98□□□□□ -0.97
BRCA1-227ENST00000591849 GPIP06744 558 aa8.98□□□□□ -0.97
BRCA1-227ENST00000591849 FPR1P21462 350 aa8.98□□□□□ -0.97
BRCA1-227ENST00000591849 GTF2E2P29084 291 aaKnown RBP8.98□□□□□ -0.97
BRCA1-227ENST00000591849 AGTR1P30556 359 aa8.98□□□□□ -0.97
BRCA1-227ENST00000591849 PCGF2P35227 344 aa8.98□□□□□ -0.97
BRCA1-227ENST00000591849 PLAURQ03405 335 aa8.98□□□□□ -0.97
BRCA1-227ENST00000591849 BNIP2Q12982 314 aa8.98□□□□□ -0.97
BRCA1-227ENST00000591849 CEACAM7Q14002 265 aa8.98□□□□□ -0.97
BRCA1-227ENST00000591849 OR7A5Q15622 319 aa8.98□□□□□ -0.97
BRCA1-227ENST00000591849 ADRM1Q16186 407 aa8.98□□□□□ -0.97
BRCA1-227ENST00000591849 VMACQ2NL98 169 aa8.98□□□□□ -0.97
BRCA1-227ENST00000591849 RABL3Q5HYI8 236 aa8.98□□□□□ -0.97
BRCA1-227ENST00000591849 ANKRD34AQ69YU3 496 aa8.98□□□□□ -0.97
BRCA1-227ENST00000591849 ALKBH2Q6NS38 261 aa8.98□□□□□ -0.97
BRCA1-227ENST00000591849 ERICH5Q6P6B1 374 aa8.98□□□□□ -0.97
BRCA1-227ENST00000591849 NUFIP2Q7Z417 695 aaKnown RBP8.98□□□□□ -0.97
BRCA1-227ENST00000591849 GALNT5Q7Z7M9 940 aa8.98□□□□□ -0.97
BRCA1-227ENST00000591849 RANBP3LQ86VV4 465 aaPredicted RBP8.98□□□□□ -0.97
BRCA1-227ENST00000591849 PTOV1Q86YD1 416 aa8.98□□□□□ -0.97
BRCA1-227ENST00000591849 SMYD1Q8NB12 490 aa8.98□□□□□ -0.97
BRCA1-227ENST00000591849 ACBD4Q8NC06 268 aa8.98□□□□□ -0.97
BRCA1-227ENST00000591849 PIGXQ8TBF5 258 aa8.98□□□□□ -0.97
BRCA1-227ENST00000591849 SLC35B4Q969S0 331 aa8.98□□□□□ -0.97
BRCA1-227ENST00000591849 RCN3Q96D15 328 aa8.98□□□□□ -0.97
BRCA1-227ENST00000591849 CMTM5Q96DZ9 223 aa8.98□□□□□ -0.97
BRCA1-227ENST00000591849 ZC3HAV1LQ96H79 300 aaKnown RBP8.98□□□□□ -0.97
BRCA1-227ENST00000591849 LURAP1Q96LR2 239 aa8.98□□□□□ -0.97
BRCA1-227ENST00000591849 DACH2Q96NX9 599 aa8.98□□□□□ -0.97
BRCA1-227ENST00000591849 POLDIP3Q9BY77 421 aaKnown RBP8.98□□□□□ -0.97
BRCA1-227ENST00000591849 EFCAB1Q9HAE3 211 aa8.98□□□□□ -0.97
BRCA1-227ENST00000591849 ZNF226Q9NYT6 803 aa8.98□□□□□ -0.97
BRCA1-227ENST00000591849 EDARQ9UNE0 448 aa8.98□□□□□ -0.97
BRCA1-227ENST00000591849 TRAPPC4Q9Y296 219 aa8.98□□□□□ -0.97
BRCA1-227ENST00000591849 AP3M1Q9Y2T2 418 aa8.98□□□□□ -0.97
BRCA1-227ENST00000591849 NOSIPQ9Y314 301 aaKnown RBP8.98□□□□□ -0.97
BRCA1-227ENST00000591849 PCNX3Q9H6A9 2034 aa8.98□□□□□ -0.97
BRCA1-227ENST00000591849 DCHS2Q6V1P9 2916 aa8.98□□□□□ -0.97
BRCA1-227ENST00000591849 CSMD2Q7Z408 3487 aa8.97□□□□□ -0.97
BRCA1-227ENST00000591849 A0A1B0GWA3 101 aa8.97□□□□□ -0.97
BRCA1-227ENST00000591849 SMAD9O15198 467 aaKnown RBP8.97□□□□□ -0.97
BRCA1-227ENST00000591849 GSTA4O15217 222 aa8.97□□□□□ -0.97
BRCA1-227ENST00000591849 TPST1O60507 370 aa8.97□□□□□ -0.97
BRCA1-227ENST00000591849 MFN2O95140 757 aa8.97□□□□□ -0.97
BRCA1-227ENST00000591849 OPN1SWP03999 348 aa8.97□□□□□ -0.97
BRCA1-227ENST00000591849 DRD4P21917 467 aa8.97□□□□□ -0.97
BRCA1-227ENST00000591849 IL32P24001 234 aa8.97□□□□□ -0.97
BRCA1-227ENST00000591849 UGT2B10P36537 528 aa8.97□□□□□ -0.97
BRCA1-227ENST00000591849 GUSBP1Q15486 140 aa8.97□□□□□ -0.97
BRCA1-227ENST00000591849 C1orf140Q5VVS0 124 aa8.97□□□□□ -0.97
BRCA1-227ENST00000591849 TMEM225Q6GV28 225 aa8.97□□□□□ -0.97
BRCA1-227ENST00000591849 NET1Q7Z628 596 aaPredicted RBP8.97□□□□□ -0.97
BRCA1-227ENST00000591849 ARPINQ7Z6K5 226 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms