RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 CADM2Q8N3J6 435 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 C11orf65Q8NCR3 313 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 SLC35B4Q969S0 331 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 LRRC58Q96CX6 371 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 DDIT4LQ96D03 193 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 DNAJA3Q96EY1 480 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 DACH2Q96NX9 599 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 C12orf49Q9H741 205 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 NANOGQ9H9S0 305 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 ARMCX1Q9P291 453 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 KLHL9Q9P2J3 617 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 KLHL13Q9P2N7 655 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 NDRG3Q9UGV2 375 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 TRAPPC4Q9Y296 219 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 ZC3H12DA2A288 527 aaKnown RBP8.18□□□□□ -1.1
DNMT1-223ENST00000591239 FAM221AA4D161 298 aa8.18□□□□□ -1.1
DNMT1-223ENST00000591239 PRORSD1PA6NEY8 169 aa8.18□□□□□ -1.1
DNMT1-223ENST00000591239 C16orf97H3BN30 126 aa8.18□□□□□ -1.1
DNMT1-223ENST00000591239 FXYD1O00168 92 aa8.18□□□□□ -1.1
DNMT1-223ENST00000591239 MRASO14807 208 aa8.18□□□□□ -1.1
DNMT1-223ENST00000591239 SLC22A2O15244 555 aa8.18□□□□□ -1.1
DNMT1-223ENST00000591239 DNPH1O43598 174 aa8.18□□□□□ -1.1
DNMT1-223ENST00000591239 TPST1O60507 370 aa8.18□□□□□ -1.1
DNMT1-223ENST00000591239 SERPINB7O75635 380 aa8.18□□□□□ -1.1
DNMT1-223ENST00000591239 MFN2O95140 757 aa8.18□□□□□ -1.1
DNMT1-223ENST00000591239 SEC24CP53992 1094 aa8.18□□□□□ -1.1
DNMT1-223ENST00000591239 PCBP3P57721 371 aaKnown RBP8.18□□□□□ -1.1
DNMT1-223ENST00000591239 OR2B6P58173 313 aa8.18□□□□□ -1.1
DNMT1-223ENST00000591239 DAZAP2Q15038 168 aaPredicted RBP8.18□□□□□ -1.1
DNMT1-223ENST00000591239 TUSC1Q2TAM9 212 aa8.18□□□□□ -1.1
DNMT1-223ENST00000591239 GLIPR1L2Q4G1C9 344 aa8.18□□□□□ -1.1
DNMT1-223ENST00000591239 REP15Q6BDI9 236 aa8.18□□□□□ -1.1
DNMT1-223ENST00000591239 BEND4Q6ZU67 534 aa8.18□□□□□ -1.1
DNMT1-223ENST00000591239 NUFIP2Q7Z417 695 aaKnown RBP8.18□□□□□ -1.1
DNMT1-223ENST00000591239 NET1Q7Z628 596 aaPredicted RBP8.18□□□□□ -1.1
DNMT1-223ENST00000591239 COMTD1Q86VU5 262 aa8.18□□□□□ -1.1
DNMT1-223ENST00000591239 LSRQ86X29 649 aaPredicted RBP8.18□□□□□ -1.1
DNMT1-223ENST00000591239 ARMC8Q8IUR7 673 aa8.18□□□□□ -1.1
DNMT1-223ENST00000591239 PCYOX1LQ8NBM8 494 aa8.18□□□□□ -1.1
DNMT1-223ENST00000591239 BHLHE22Q8NFJ8 381 aaPredicted RBP8.18□□□□□ -1.1
DNMT1-223ENST00000591239 OR10A6Q8NH74 314 aa8.18□□□□□ -1.1
DNMT1-223ENST00000591239 C3orf49Q96BT1 292 aa8.18□□□□□ -1.1
DNMT1-223ENST00000591239 ZNF775Q96BV0 537 aaPredicted RBP8.18□□□□□ -1.1
DNMT1-223ENST00000591239 ZHX1-C8orf76Q96EF9 292 aa8.18□□□□□ -1.1
DNMT1-223ENST00000591239 WFIKKN1Q96NZ8 548 aa8.18□□□□□ -1.1
DNMT1-223ENST00000591239 SH3GL1Q99961 368 aa8.18□□□□□ -1.1
DNMT1-223ENST00000591239 ELAC2Q9BQ52 826 aaKnown RBP8.18□□□□□ -1.1
DNMT1-223ENST00000591239 PSD2Q9BQI7 771 aa8.18□□□□□ -1.1
DNMT1-223ENST00000591239 GPATCH1Q9BRR8 931 aaKnown RBP8.18□□□□□ -1.1
DNMT1-223ENST00000591239 TACO1Q9BSH4 297 aaKnown RBP8.18□□□□□ -1.1
DNMT1-223ENST00000591239 KLHL4Q9C0H6 718 aa8.18□□□□□ -1.1
DNMT1-223ENST00000591239 PIF1Q9H611 641 aa8.18□□□□□ -1.1
DNMT1-223ENST00000591239 BCO1Q9HAY6 547 aa8.18□□□□□ -1.1
DNMT1-223ENST00000591239 RASSF1Q9NS23 344 aa8.18□□□□□ -1.1
DNMT1-223ENST00000591239 GID8Q9NWU2 228 aa8.18□□□□□ -1.1
DNMT1-223ENST00000591239 TMEM181Q9P2C4 612 aa8.18□□□□□ -1.1
DNMT1-223ENST00000591239 ING1Q9UK53 422 aaPredicted RBP8.18□□□□□ -1.1
DNMT1-223ENST00000591239 ANGPT4Q9Y264 503 aa8.18□□□□□ -1.1
DNMT1-223ENST00000591239 CAPN7Q9Y6W3 813 aa8.18□□□□□ -1.1
DNMT1-223ENST00000591239 SPG11Q96JI7 2443 aa8.18□□□□□ -1.1
DNMT1-223ENST00000591239 MYO9AB2RTY4 2548 aa8.18□□□□□ -1.1
DNMT1-223ENST00000591239 ANKRD17O75179 2603 aaKnown RBP8.17□□□□□ -1.1
DNMT1-223ENST00000591239 ZNF724A8MTY0 619 aa8.17□□□□□ -1.1
DNMT1-223ENST00000591239 M0QX08 132 aa8.17□□□□□ -1.1
DNMT1-223ENST00000591239 CASKO14936 926 aa8.17□□□□□ -1.1
DNMT1-223ENST00000591239 EIF1BO60739 113 aaKnown RBP8.17□□□□□ -1.1
DNMT1-223ENST00000591239 CCDC22O60826 627 aa8.17□□□□□ -1.1
DNMT1-223ENST00000591239 GCM2O75603 506 aaPredicted RBP8.17□□□□□ -1.1
DNMT1-223ENST00000591239 IMPDH2P12268 514 aa8.17□□□□□ -1.1
DNMT1-223ENST00000591239 FPR1P21462 350 aa8.17□□□□□ -1.1
DNMT1-223ENST00000591239 CCKARP32238 428 aa8.17□□□□□ -1.1
DNMT1-223ENST00000591239 LSP1P33241 339 aa8.17□□□□□ -1.1
DNMT1-223ENST00000591239 PCGF2P35227 344 aa8.17□□□□□ -1.1
DNMT1-223ENST00000591239 GZMMP51124 257 aa8.17□□□□□ -1.1
DNMT1-223ENST00000591239 SLC35A1P78382 337 aa8.17□□□□□ -1.1
DNMT1-223ENST00000591239 H3F3AP84243 136 aa8.17□□□□□ -1.1
DNMT1-223ENST00000591239 DMTNQ08495 405 aa8.17□□□□□ -1.1
DNMT1-223ENST00000591239 BNIP2Q12982 314 aa8.17□□□□□ -1.1
DNMT1-223ENST00000591239 PDK3Q15120 406 aa8.17□□□□□ -1.1
DNMT1-223ENST00000591239 RABL3Q5HYI8 236 aa8.17□□□□□ -1.1
DNMT1-223ENST00000591239 ABLIM2Q6H8Q1 611 aa8.17□□□□□ -1.1
DNMT1-223ENST00000591239 TFAP2EQ6VUC0 442 aa8.17□□□□□ -1.1
DNMT1-223ENST00000591239 STAC2Q6ZMT1 411 aa8.17□□□□□ -1.1
DNMT1-223ENST00000591239 SPATA21Q7Z572 469 aa8.17□□□□□ -1.1
DNMT1-223ENST00000591239 ATG4DQ86TL0 474 aaPredicted RBP8.17□□□□□ -1.1
DNMT1-223ENST00000591239 CCDC103Q8IW40 242 aa8.17□□□□□ -1.1
DNMT1-223ENST00000591239 SLC30A8Q8IWU4 369 aa8.17□□□□□ -1.1
DNMT1-223ENST00000591239 POU5F2Q8N7G0 328 aa8.17□□□□□ -1.1
DNMT1-223ENST00000591239 LSMEM1Q8N8F7 131 aa8.17□□□□□ -1.1
DNMT1-223ENST00000591239 SMYD1Q8NB12 490 aa8.17□□□□□ -1.1
DNMT1-223ENST00000591239 OR8J3Q8NGG0 315 aa8.17□□□□□ -1.1
DNMT1-223ENST00000591239 ZNF300Q96RE9 604 aaPredicted RBP8.17□□□□□ -1.1
DNMT1-223ENST00000591239 ECSITQ9BQ95 431 aa8.17□□□□□ -1.1
DNMT1-223ENST00000591239 MED18Q9BUE0 208 aa8.17□□□□□ -1.1
DNMT1-223ENST00000591239 POLDIP3Q9BY77 421 aaKnown RBP8.17□□□□□ -1.1
DNMT1-223ENST00000591239 POTEKPQ9BYX7 375 aa8.17□□□□□ -1.1
DNMT1-223ENST00000591239 FAM107BQ9H098 131 aa8.17□□□□□ -1.1
DNMT1-223ENST00000591239 CLEC4MQ9H2X3 399 aaPredicted RBP8.17□□□□□ -1.1
DNMT1-223ENST00000591239 KLHL28Q9NXS3 571 aa8.17□□□□□ -1.1
DNMT1-223ENST00000591239 RPS6KB2Q9UBS0 482 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms