RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 KRT73Q86Y46 540 aa9.42□□□□□ -0.9
CLPTM1-211ENST00000589347 WFDC8Q8IUA0 241 aa9.42□□□□□ -0.9
CLPTM1-211ENST00000589347 ZNF100Q8IYN0 542 aa9.42□□□□□ -0.9
CLPTM1-211ENST00000589347 CKAP2Q8WWK9 683 aa9.42□□□□□ -0.9
CLPTM1-211ENST00000589347 CNOT9Q92600 299 aaKnown RBP9.42□□□□□ -0.9
CLPTM1-211ENST00000589347 SLC35B4Q969S0 331 aa9.42□□□□□ -0.9
CLPTM1-211ENST00000589347 AURKBQ96GD4 344 aaPredicted RBP9.42□□□□□ -0.9
CLPTM1-211ENST00000589347 CCL19Q99731 98 aa9.42□□□□□ -0.9
CLPTM1-211ENST00000589347 EBF4Q9BQW3 602 aa9.42□□□□□ -0.9
CLPTM1-211ENST00000589347 NAA11Q9BSU3 229 aaPredicted RBP9.42□□□□□ -0.9
CLPTM1-211ENST00000589347 SPATA5L1Q9BVQ7 753 aa9.42□□□□□ -0.9
CLPTM1-211ENST00000589347 A4GALTQ9NPC4 353 aa9.42□□□□□ -0.9
CLPTM1-211ENST00000589347 MRGBPQ9NV56 204 aa9.42□□□□□ -0.9
CLPTM1-211ENST00000589347 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.42□□□□□ -0.9
CLPTM1-211ENST00000589347 NOSIPQ9Y314 301 aaKnown RBP9.42□□□□□ -0.9
CLPTM1-211ENST00000589347 TMED7Q9Y3B3 224 aa9.42□□□□□ -0.9
CLPTM1-211ENST00000589347 PCDHB14Q9Y5E9 798 aa9.42□□□□□ -0.9
CLPTM1-211ENST00000589347 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.41□□□□□ -0.9
CLPTM1-211ENST00000589347 CDHR4A6H8M9 788 aa9.41□□□□□ -0.9
CLPTM1-211ENST00000589347 AP3D1O14617 1153 aa9.41□□□□□ -0.9
CLPTM1-211ENST00000589347 EIF1BO60739 113 aaKnown RBP9.41□□□□□ -0.9
CLPTM1-211ENST00000589347 BCAS1O75363 584 aaPredicted RBP9.41□□□□□ -0.9
CLPTM1-211ENST00000589347 CNOT4O95628 575 aaKnown RBP9.41□□□□□ -0.9
CLPTM1-211ENST00000589347 TFPTP0C1Z6 253 aa9.41□□□□□ -0.9
CLPTM1-211ENST00000589347 CXCR1P25024 350 aa9.41□□□□□ -0.9
CLPTM1-211ENST00000589347 TACR3P29371 465 aa9.41□□□□□ -0.9
CLPTM1-211ENST00000589347 IDUAP35475 653 aa9.41□□□□□ -0.9
CLPTM1-211ENST00000589347 OR3A2P47893 321 aa9.41□□□□□ -0.9
CLPTM1-211ENST00000589347 MVDP53602 400 aa9.41□□□□□ -0.9
CLPTM1-211ENST00000589347 OR2B6P58173 313 aa9.41□□□□□ -0.9
CLPTM1-211ENST00000589347 NCALDP61601 193 aa9.41□□□□□ -0.9
CLPTM1-211ENST00000589347 ITGADQ13349 1161 aa9.41□□□□□ -0.9
CLPTM1-211ENST00000589347 RGNQ15493 299 aa9.41□□□□□ -0.9
CLPTM1-211ENST00000589347 ZNF311Q5JNZ3 666 aa9.41□□□□□ -0.9
CLPTM1-211ENST00000589347 RPS26P11Q5JNZ5 115 aaPredicted RBP9.41□□□□□ -0.9
CLPTM1-211ENST00000589347 LRIF1Q5T3J3 769 aa9.41□□□□□ -0.9
CLPTM1-211ENST00000589347 ANKRD34AQ69YU3 496 aa9.41□□□□□ -0.9
CLPTM1-211ENST00000589347 WBP2NLQ6ICG8 309 aa9.41□□□□□ -0.9
CLPTM1-211ENST00000589347 BLOC1S3Q6QNY0 202 aa9.41□□□□□ -0.9
CLPTM1-211ENST00000589347 Q6ZT83 130 aa9.41□□□□□ -0.9
CLPTM1-211ENST00000589347 BHLHA15Q7RTS1 189 aaPredicted RBP9.41□□□□□ -0.9
CLPTM1-211ENST00000589347 NUFIP2Q7Z417 695 aaKnown RBP9.41□□□□□ -0.9
CLPTM1-211ENST00000589347 MTDHQ86UE4 582 aaKnown RBP9.41□□□□□ -0.9
CLPTM1-211ENST00000589347 VRK2Q86Y07 508 aa9.41□□□□□ -0.9
CLPTM1-211ENST00000589347 GABRG1Q8N1C3 465 aa9.41□□□□□ -0.9
CLPTM1-211ENST00000589347 CADM2Q8N3J6 435 aa9.41□□□□□ -0.9
CLPTM1-211ENST00000589347 SLC38A5Q8WUX1 472 aa9.41□□□□□ -0.9
CLPTM1-211ENST00000589347 PIGTQ969N2 578 aa9.41□□□□□ -0.9
CLPTM1-211ENST00000589347 APH1AQ96BI3 265 aa9.41□□□□□ -0.9
CLPTM1-211ENST00000589347 S100PBPQ96BU1 408 aa9.41□□□□□ -0.9
CLPTM1-211ENST00000589347 ZG16BQ96DA0 208 aa9.41□□□□□ -0.9
CLPTM1-211ENST00000589347 ZNF300Q96RE9 604 aaPredicted RBP9.41□□□□□ -0.9
CLPTM1-211ENST00000589347 SPATA9Q9BWV2 254 aa9.41□□□□□ -0.9
CLPTM1-211ENST00000589347 TAPBPLQ9BX59 468 aa9.41□□□□□ -0.9
CLPTM1-211ENST00000589347 PAIP1Q9H074 479 aaKnown RBP9.41□□□□□ -0.9
CLPTM1-211ENST00000589347 LIME1Q9H400 295 aa9.41□□□□□ -0.9
CLPTM1-211ENST00000589347 SLC6A13Q9NSD5 602 aa9.41□□□□□ -0.9
CLPTM1-211ENST00000589347 TMEM181Q9P2C4 612 aa9.41□□□□□ -0.9
CLPTM1-211ENST00000589347 RPS6KB2Q9UBS0 482 aa9.41□□□□□ -0.9
CLPTM1-211ENST00000589347 LEF1Q9UJU2 399 aaPredicted RBP9.41□□□□□ -0.9
CLPTM1-211ENST00000589347 SLC13A4Q9UKG4 626 aa9.41□□□□□ -0.9
CLPTM1-211ENST00000589347 TRAPPC4Q9Y296 219 aa9.41□□□□□ -0.9
CLPTM1-211ENST00000589347 SLC9A8Q9Y2E8 581 aa9.41□□□□□ -0.9
CLPTM1-211ENST00000589347 IGKV3D-15A0A087WSY6 115 aa9.4□□□□□ -0.9
CLPTM1-211ENST00000589347 TMEM72A0PK05 275 aa9.4□□□□□ -0.9
CLPTM1-211ENST00000589347 ANGPT2O15123 496 aa9.4□□□□□ -0.9
CLPTM1-211ENST00000589347 ARHGEF9O43307 516 aa9.4□□□□□ -0.9
CLPTM1-211ENST00000589347 SMPD2O60906 423 aa9.4□□□□□ -0.9
CLPTM1-211ENST00000589347 TMCC2O75069 709 aa9.4□□□□□ -0.9
CLPTM1-211ENST00000589347 GCM2O75603 506 aaPredicted RBP9.4□□□□□ -0.9
CLPTM1-211ENST00000589347 ADAP00813 363 aa9.4□□□□□ -0.9
CLPTM1-211ENST00000589347 C1QCP02747 245 aa9.4□□□□□ -0.9
CLPTM1-211ENST00000589347 GPIP06744 558 aa9.4□□□□□ -0.9
CLPTM1-211ENST00000589347 TROVE2P10155 538 aaKnown RBP eCLIP9.4□□□□□ -0.9
CLPTM1-211ENST00000589347 ARAFP10398 606 aa9.4□□□□□ -0.9
CLPTM1-211ENST00000589347 BMP2P12643 396 aa9.4□□□□□ -0.9
CLPTM1-211ENST00000589347 CCNA2P20248 432 aa9.4□□□□□ -0.9
CLPTM1-211ENST00000589347 GTF2E2P29084 291 aaKnown RBP9.4□□□□□ -0.9
CLPTM1-211ENST00000589347 ADAM8P78325 824 aa9.4□□□□□ -0.9
CLPTM1-211ENST00000589347 CAPRIN1Q14444 709 aaKnown RBP9.4□□□□□ -0.9
CLPTM1-211ENST00000589347 ACKR1Q16570 336 aa9.4□□□□□ -0.9
CLPTM1-211ENST00000589347 AGKQ53H12 422 aa9.4□□□□□ -0.9
CLPTM1-211ENST00000589347 SFRP5Q5T4F7 317 aa9.4□□□□□ -0.9
CLPTM1-211ENST00000589347 ZNF704Q6ZNC4 412 aaPredicted RBP9.4□□□□□ -0.9
CLPTM1-211ENST00000589347 P3H2Q8IVL5 708 aa9.4□□□□□ -0.9
CLPTM1-211ENST00000589347 UBE2J2Q8N2K1 259 aa9.4□□□□□ -0.9
CLPTM1-211ENST00000589347 BHLHE22Q8NFJ8 381 aaPredicted RBP9.4□□□□□ -0.9
CLPTM1-211ENST00000589347 HSD17B8Q92506 261 aa9.4□□□□□ -0.9
CLPTM1-211ENST00000589347 ZNF524Q96C55 264 aa9.4□□□□□ -0.9
CLPTM1-211ENST00000589347 MUCL1Q96DR8 90 aa9.4□□□□□ -0.9
CLPTM1-211ENST00000589347 ARL5BQ96KC2 179 aa9.4□□□□□ -0.9
CLPTM1-211ENST00000589347 PIP5K1AQ99755 562 aa9.4□□□□□ -0.9
CLPTM1-211ENST00000589347 OR11A1Q9GZK7 315 aa9.4□□□□□ -0.9
CLPTM1-211ENST00000589347 ESRP2Q9H6T0 727 aaKnown RBP9.4□□□□□ -0.9
CLPTM1-211ENST00000589347 BCL2L10Q9HD36 194 aa9.4□□□□□ -0.9
CLPTM1-211ENST00000589347 NPHS2Q9NP85 383 aa9.4□□□□□ -0.9
CLPTM1-211ENST00000589347 SELENONQ9NZV5 590 aa9.4□□□□□ -0.9
CLPTM1-211ENST00000589347 OSGIN1Q9UJX0 560 aa9.4□□□□□ -0.9
CLPTM1-211ENST00000589347 ANGPT4Q9Y264 503 aa9.4□□□□□ -0.9
CLPTM1-211ENST00000589347 A0A1W2PP18 115 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms